L’azote, si cher à nos campagnes

Nitrogen (N) is an input essential to agriculture which produces plant but also animal proteins. N cycle is a biological complex cycle, with biological fixation converting atmospheric unreactive di-nitrogen into many reactive nitrogen forms (Nr), essential for life. Nr forms are implicated in many transformations in air, water and soil, as well as within living organisms, until recovering to the N2 form through denitrification. These natural processes were amplified by the development of industrial husbandry and the massive use of N industrial fertilizers, making N expensive for forffarmers. Furthermore, its management in agriculture and its low efficiency in plant production and even more in animal production lead to losses to the environment. The most mediatized one is nitrate lixiviation with its impacts on water quality. N losses to atmosphere have become a matter of concern for the French public authorities since about twenty years, for their impacts on greenhouse balance (nitrous oxide N2 0), air quality and ecosystems and biodiversity (ammonia NH3 , and nitrogen oxides NOx). The costs of abatement strategies are more or less amortized thanks to the profits realized in economy (N expenses in agriculture) and for society (human health, global changes…). | L’azote (N) est un intrant indispensable à une agriculture productrice de protéines végétales mais surtout animales. Le cycle de l’azote est un cycle biogéochimique complexe, dont l’essentiel des entrées dans la biosphère est constitué par la fixation biologique. Toutes les formes d’azote chimiquement et biologiquement actives constituent l’azote dit réactif. Il l’eau et le sol, ainsi qu’au sein des êtres vivants, allant jusqu’au retour à sa forme diazote par la dénitrification. Ces processus naturels ont été amplifiés par le développement de l’élevage industriel et le recoursmassif aux engrais industriels azotés. Or l’azote coûte cher financièrement aux agriculteurs, et sa gestion en agriculture génère des rejets vers l’environnement liés aux faibles rendements d’utilisation de l’azote par les végétaux et surtout par les animaux. Les rejets les plus médiatisés sont les nitrates, avec les impacts sur la qualité des eaux. Les pertes vers l’atmosphèrepréoccupent les pouvoirs publics français depuis une vingtaine d’années, du fait de leurs impacts sur le réchauffement global de l’atmosphère (protoxyde d’azote, N2 0) mais aussi sur la qualité de l’air (ammoniac NH3 , et oxydes d’azote NOX). Les parades pour réduire les émissions de ces polluants et gaz à effet de serre ont également un coût, plus ou moins amorti selon lescomposés émis et/ou les postes émetteurs concernés grâce aux bénéfices économiques (poste azote en agriculture) et sociaux (santé humaine, changements globaux…) réalisés.

Natural processes and human activities play a crucial role in changing the nitrogen cycle and increasing nitrous oxide (N₂O) emissions, which are accelerating at an unprecedented rate. N₂O has serious global warming potential (GWP), about 310 times higher than that of carbon dioxide. The food production, transportation, and energy required to sustain a world population of seven billion have required dramatic increases in the consumption of synthetic nitrogen (N) fertilizers and fossil fuels, leading to increased N₂O in air and water. These changes have radically disturbed the nitrogen cycle and reactive nitrogen species, such as nitrous oxide (N₂O), and have impacted the climatic system. Yet, systematic and comprehensive studies on various underlying processes and parameters in the altered nitrogen cycle, and their implications for the climatic system are still lacking. This paper reviews how the nitrogen cycle has been disturbed and altered by anthropogenic activities, with a central focus on potential pathways of N₂O generation. The authors also estimate the N₂O–N emission mainly due to anthropogenic activities will be around 8.316 Tg N₂O–N yr⁻¹ in 2050. In order to minimize and tackle the N₂O emissions and its consequences on the global ecosystem and climate change, holistic mitigation strategies and diverse adaptations, policy reforms, and public awareness are suggested as vital considerations. This study concludes that rapidly increasing anthropogenic perturbations, the identification of new microbial communities, and their role in mediating biogeochemical processes now shape the modern nitrogen cycle.

One of the strategies to realize a nitrogen cycle society, we attempted to recover ammonium ions from industrial wastewater, especially sewage water with adsorbent materials. We have developed an adsorbent with high ammonium selectivity based on copper hexacyanoferrate and granulated it as pellets. Using a compact column system filled with this granule adsorbent, ammonium ions were recovered from sewage containing 1000–1500 mg-NH₄⁺/L ammonium ions. Despite the coexistence of many metal ions, the adsorbent selectively and stably adsorbed ammonium ions. Furthermore, it was shown that the saturated adsorbent can be regenerated by flowing a potassium ion solution through a column adsorbent to desorb ammonium ions. In other words, the column can be used repeatedly, and there was almost little deterioration in adsorption even after 250 cycles. In addition, it was shown that by increasing the number of stages of this column, it is possible to sufficiently reduce the ammonium in the adsorbent solution and recover the concentrated ammonium solution.

Soil antibiotic resistome and the nitrogen cycle are affected by florfenicol addition to manured soils but their interactions have not been fully described. In the present study, antibiotic resistance genes (ARGs) and nitrogen cycle genes possessed by soil bacteria were characterized using real-time fluorescence quantification PCR (qPCR) and metagenomic sequencing in a short-term (30 d) soil model experiment. Florfenicol significantly changed in the abundance of genes conferring resistance to aminoglycosides, β-lactams, tetracyclines and macrolides. And the abundance of Sphingomonadaceae, the protein metabolic and nitrogen metabolic functions, as well as NO reductase, nitrate reductase, nitrite reductase and N₂O reductase can also be affected by florfenicol. In this way, ARG types of genes conferring resistance to aminoglycosides, β-lactamases, tetracyclines, colistin, fosfomycin, phenicols and trimethoprim were closely associated with multiple nitrogen cycle genes. Actinobacteria, Chlorobi, Firmicutes, Gemmatimonadetes, Nitrospirae, Proteobacteria and Verrucomicrobia played an important role in spreading of ARGs. Moreover, soil physicochemical properties were important factors affecting the distribution of soil flora. This study provides a theoretical basis for further exploration of the transmission regularity and interference mechanism of ARGs in soil bacteria responsible for nitrogen cycle.

The increase of gaseous ammonia (NH₃) concentration in the atmosphere significantly impacts the regional air quality, human health, and the nitrogen cycle of ecosystems. This study aims to verify the reanalyzed product of IASI NH₃ (the ANNI-NH₃-v2.1R-I, hereafter referred to as IASI_NH₃_R) and to analyze the spatial and temporal characteristics of atmospheric NH₃ during 2008–2016 and its underlying influencing factors. Our results show a good agreement between spatial pattern and temporal (annual and monthly) trend of the satellite-derived surface NH₃ concentrations and the measured near-ground NH₃ measurements over different land covers in Eastern China, suggesting the IASI_NH₃_R product can be used to investigate spatial and temporal trends of atmospheric NH₃ concentration. The annual mean NH₃ column concentrations peaked in the North China Plain (averaged 12 × 10¹⁵ mol cm⁻² yr⁻¹) and showed a significant increasing trend at a rate of 0.6 × 10¹⁵ mol cm⁻² yr⁻¹ during the entire period, which can be ascribed to densely populated, intensive agricultural activities and substantial reduction of SO₂ and NO₂ emissions since 2011. The NH₃ column concentrations show a slight increase in winter in most regions of China, probably due to less precipitation amount and increased uncertainty for lower NH₃ columns and the thermal contrast (TC). A large seasonal variation of NH₃ column concentrations was observed, with the highest values in summer and the lowest in autumn. Such seasonal variation is mainly affected by seasonal differences in NH₃ emissions and meteorological conditions. Our results suggest that the current control measures effectively decreased SO₂ and NO₂ pollution but are not yet apparent in the mitigation of atmospheric NH₃ pollution, which also merits more attention considering that no effective measures are being implemented for NH₃ emission control at a regional or national scale in China.

Currently, wastewater treatment plant (WWTP) upgrades have been implemented in various countries to improve the water quality of the receiving ecosystems and protect aquatic species from potential deleterious effects. The impact of WWTP upgrades on biological communities and functions in receiving waters is a fundamental issue that remains largely unaddressed, especially for microbial communities. Here, we selected two wastewater-dominant rivers in Beijing (China) as study sites, i.e., one river receiving water from an upgraded WWTP to explore the impacts of upgrade on aquatic ecosystems and another river receiving water from a previously upgraded WWTP as a reference. After a five-year investigation, we found that WWTP upgrade significantly decreased total organic nitrogen (N) in the receiving river. As a biological response, N-metabolism-related bacterioplankton are accordingly altered in composition and tend to intensively interact according to the network analysis. Metagenomic analysis based on the N-cycling genes and metagenomic-assembled genomes revealed that WWTP upgrade decreased the abundance of nitrifying bacteria but increased that of denitrifying and dissimilatory nitrate reduction to ammonium (DNRA) bacteria in the receiving river, according to their marker gene abundances. After calculation of the ratios between DNRA and denitrifying bacteria and quantification of genes/bacteria related to ammonium cycling, we deduced the changes in N-metabolism-related bacteria are likely an attempt to provide enough bioavailable N for plankton growth as conservation of ammonium was enhanced in receiving river after WWTP upgrade.

The effects of warming and elevated ozone (O₃) concentrations on nitrous oxide (N₂O) emission from cropland has received increasing attention; however, the small number of studies on this topic impedes understanding. A field experiment was performed to explore the role of warming and elevated O₃ concentrations on N₂O emission from wheat-soybean rotation cropland from 2012 to 2013 using open-top chambers (OTCs). Experimental treatments included ambient temperature (control), elevated temperature (+2 °C), elevated O₃ (100 ppb), and combined elevated temperature (+2 °C) and O₃ (100 ppb). Results demonstrate that warming significantly increased the accumulative amount of N₂O (AAN) emitted from the soil-winter wheat system due to enhanced nitrification rates in the wheat farmland and nitrate reductase activity in wheat leaves. However, elevated O₃ concentrations significantly decreased AAN emission from the soil-soybean system owing to reduced nitrification rates in the soybean farmland. The combined treatment of warming and elevated O₃ inhibited the emission of N₂O from the soybean farmland. Additionally, both the warming and combined treatments significantly increased soil nitrification rates in winter wheat and soybean croplands and decreased denitrification rates in the winter wheat cropping system. Our results suggest that global warming and elevated O₃ concentrations will strongly affect N₂O emission from wheat-soybean rotation croplands.

Deposition of reactive nitrogen (N) is a major threat to terrestrial ecosystems associated with impacts on ecosystem properties and functions including carbon (C) and nutrient stocks, soil water quality and nutrient retention. In the oceanic-alpine Racomitrium heath habitat, N deposition is associated with moss mat degradation and a shift from bryophyte to graminoid dominance. To investigate the effects of moss mat decline on C and N stocks and fluxes, we collected Racomitrium heath vegetation/soil cores from sites along a gradient of N deposition in the UK. Cores were maintained under controlled conditions and exposed to scenarios of current (8–40 kg N ha⁻¹ y⁻¹), reduced (8 kg N ha⁻¹ y⁻¹) and elevated (50 kg N ha⁻¹ y⁻¹) N deposition. Cores from high N deposition sites had smaller aboveground C and N stocks and, under current conditions, leached large amounts of inorganic N and had low soil water pH compared with low N deposition sites. With reduced N deposition there was evidence for rapid recovery of soil water quality in terms of reduced N leaching and small increases in pH. Under high N deposition, cores from low N deposition sites retained much of the applied N while those with a history of high N deposition leached large amounts of inorganic N. Carbon fluxes in soil water and net CO₂ fluxes varied according to core source site but were not affected by the N deposition scenarios. We conclude that C and N stocks and cycling in Racomitrium heath are strongly affected by long-term exposure to N deposition but that soil water quality may improve rapidly, if N deposition rates are reduced. The legacy of N deposition impacts on moss mat cover and vegetation composition however, mean that the ecosystem remains sensitive to future pulses in N input.

The Yangtze River, which is the largest in Euro-Asian, receives tremendous anthropogenic nitrogen input and is typically characterized by severe eutrophication and hypoxia. Two major processes, denitrification and anaerobic ammonium oxidation (anammox), play vital roles for removing nitrogen global in nitrogen cycling. In the current study, sediment samples were collected from both latitudinal and longitudinal transects along the coastal Yangtze River and the East China Sea (ECS). We investigated community composition and distributions of nosZ gene-encoded denitrifiers by high throughput sequencing, and also quantified the relative abundances of both denitrifying and anammox bacteria by q-PCR analysis. Denitrifying communities showed distinct spatial distribution patterns that were impacted by physical (water current and river runoffs) and chemical (nutrient availability and organic content) processes. Both denitrifying and anammox bacteria contributed to the nitrogen removal in Yangtze Estuary and the adjacent ECS, and these two processes shifted from coastal to open ocean with reverse trends: the abundance of nosZ gene decreased from coastal to open ocean while anammox exhibited an increasing trend based on quantifications of hzsB and 16S rRNA genes. Further correspondence correlation analysis revealed that salinity and nutrients were the main factors in structuring composition and distribution of denitrifying and anammox bacteria. This study improved our understanding of dynamic processes in nitrogen removal from estuarine to open ocean. We hypothesize that denitrification is the major nitrogen removal pathway in estuaries, but in open oceans, low nutrient and organic matter concentrations restrict denitrification, thus increasing the importance of anammox as a nitrogen removal process.