Heavy metal contamination in protected-field vegetable production has aroused widespread concern and manure is considered to be one of the contamination sources. Little is known about its long-term effects on heavy metal pollution in uncontaminated soils. A 15-year protected-field vegetable production experiment was carried out with three manure treatments (chicken manure: cattle manure = 3:1) with high (HMAR), medium (MMAR) and low (LMAR) application rates to evaluate the long-term risks of heavy metal pollution. It was found that continuous and high manure application rates significantly increased the total concentrations of soil Cd, Zn, Cr, and Cu rather than Pb, Ni or As. The high application rate of manure also increased soil available heavy metals although the soil organic matter was increased as well. Though total soil Cd under the HMAR exceeded the threshold of national soil standard, Cd content in tomato and fennel still complied with the food safety requirements of vegetables. Generally, the accumulation rates of soil Zn, Cu, and Cr with 1 t⋅ha⁻¹ of manure application in three treatments were ranked by HMAR < MMAR < LMAR. Based on the results of the ratio of heavy metal accumulation risk (RAR), Zn, Cu, and Cr under HMAR and Cd and Zn under MMAR would exceed their soil threshold values within 100 years and RAR could be a useful indicator for monitoring the long-term risk of soil heavy metal pollution. Recommended manure application rates to guarantee a 100-year period of clean production were 44, 74, and 63 t⋅ha⁻¹⋅yr⁻¹ for Zn, Cu, and Cr, respectively. Measurements should be taken to minimize the risk of heavy metals (Cd, Zn, Cr, and Cu) pollution sourced from manure to ensure food safety and ‘cleaner’ protected-field vegetable production.

Mobile genetic elements (MGEs) play critical roles in transferring antibiotic resistance genes (ARGs) among different microorganisms in the environment. This study aimed to explore the fate of MGEs during chicken manure (CM) and bovine manure (BM) composting to assess horizontal transfer risks of ARGs. The results showed that the removal efficiency of MGEs during CM composting was significantly higher than that during BM composting, because the potential host bacteria of MGEs were eliminated largely during CM composting. Meanwhile, these potential host bacterial communities are significantly influenced by pH, NH4+, NO3− and total N, which can be used to regulate host bacterial communities to remove MGEs during composting. Projection pursuit regression further confirmed that composting can effectively reduce the horizontal transfer risk of ARGs, especially for CM composting. These results identified the critical roles of host bacterial communities in MGEs removal during composting of different animal manures.

Roxarsone (3-nitro-4-hydroxyphenylarsonic acid, ROX) is an arsenic-containing compound widely used as a feed additive in poultry industries. ROX excreted in chicken manure can be transformed by microbes to different arsenic species in the environment. To date, most of the studies on microbial transformation of ROX have focused on anaerobic microorganisms. Here, we isolated a pure cultured aerobic ROX-transforming bacterial strain, CZ-1, from an arsenic-contaminated paddy soil. On the basis of 16S rRNA gene sequence, strain CZ-1 was classified as a member of the genus Enterobacter. During ROX biotransformation by strain CZ-1, five metabolites including arsenate (As[V]), arsenite (As[III]), N-acetyl-4-hydroxy-m-arsanilic acid (N-AHPAA), 3-amino-4-hydroxyphenylarsonic acid (3-AHPAA) and a novel sulfur-containing arsenic species (AsC₉H₁₃N₂O₆S) were detected and identified based on high-performance liquid chromatography-inductively coupled plasma mass spectrometry (HPLC-ICP-MS), HPLC-ICP-MS/electrospray ionization mass spectrometry (ESI-MS) and HPLC-electrospray ionization hybrid quadrupole time-of-flight mass spectrometry (ESI-qTOF-MS) analyses. N-AHPAA and 3-AHPAA were the main products, and 3-AHPAA could also be transformed to N-AHPAA. Based on the results, we propose a novel ROX biotransformation pathway by Enterobacter. sp CZ-1, in which the nitro group of ROX is first reduced to amino group (3-AHPAA) and then acetylated to N-AHPAA.

Clay minerals are the most popular adsorbents/amendments for immobilizing heavy metals in contaminated soils, but the dissolved organic matter (DOM) in soil environment would potentially affect the adsorption/immobilization capacity of clay minerals for heavy metals. In this study, the effects of DOM derived from chicken manure (CM) on the adsorption of cadmium (Cd2+) on two clay minerals, bentonite and zeolite, were investigated. The equilibrium data for Cd2+ sorption in the absence or presence of CM-DOM could be well-fitted to the Langmuir equation (R2 > 0.97). The presence of CM-DOM in the aqueous solution was found to greatly reduce the adsorption capacity of both minerals for Cd2+, in particular zeolite, and the percentage decreases for Cd2+ sorption increased with increasing concentrations of Cd2+ as well as CM-DOM in aqueous solutions. The adsorption of CM-DOM on zeolite was greater than that on bentonite in the absence of Cd2+, however, a sharp increase was observed for CM-DOM sorption on bentonite with increasing Cd2+ concentrations but little change for that on zeolite, which can be attributed to the different ternary structures on mineral surface. The CM-DOM modified clay minerals were utilized to investigate the effect of mineral-adsorbed CM-DOM on Cd2+ sorption. The adsorbed form was found to inhibit Cd2+ sorption, and further calculation suggested it primarily responsible for the overall decrease in Cd2+ sorption on clay minerals in the presence of CM-DOM in aqueous solutions. An investigation for the mineral surface morphology suggested that the mineral-adsorbed CM-DOM decreased Cd2+ sorption on bentonite mainly through barrier effect, while in the case of zeolite, it was the combination of active sites occupation and barrier effect. These results can serve as a guide for evaluating the performance of clay minerals in immobilizing heavy metals when animal manure is present in contaminated soils.

Concentrated animal feeding operations around the globe generate large amounts of nitrous oxide (N2O) in the surrounding atmosphere. Liquid animal waste systems have received little attention with respect to N2O emissions. We hypothesized that the solution chemistry of animal waste aqueous suspensions would promote conditions that lead to N2O supersaturation at the liquid/air interface. The concentration of dissolved N2O in poultry litter (PL) aqueous suspensions at 25 °C was 0.36 μg N2O mL−1, at least an order of magnitude greater than that measured in water in equilibrium with ambient air, suggesting N2O supersaturation. There was a nonlinear increase in the N2O Henry constants of PL from 2810 atm/mole fraction at 35 °C to 17 300 atm/mole fraction at 41 °C. The extremely high N2O Henry constants were partially ascribed to N2O complexation with aromatic moieties. Complexed N2O structures were unstable at temperatures > 35 °C, supplying the headspace with additional free N2O concentrations. Temperature-dependent N2O supersaturation at the liquid/air interface of animal waste.

The Nanfei River was one of dominant inflowing rivers of the fifth largest freshwater Chaohu Lake in China, which had been subjected to increasing nutrients and contaminants from population expansion, rapid industrialization and agricultural intensification in recent decades. In present study, surface sediment from the Nanfei River was collected to investigate the anthropogenic impact on distribution and bioavailability of heavy metals. Possible Cd sources along the river were constrained by using Cd isotope signatures and labile concentrations of heavy metals in sediment were determined through the DGT technique for risk assessment. Results showed that Cd in river sediment showed greatest enrichment (EF 0.8–9.4), indicating massive pollution from anthropogenic activities. Among the various possible Cd source materials, urban road dust, industrial soil and chicken manure, displayed higher Cd abundance and enrichment that might contribute to Cd accumulation in river sediment. Cadmium isotopic composition in river sediment was ranged from −0.21 ± 0.01‰ to 0.13 ± 0.03‰, whereas yielded relative variation from −0.31 ± 0.02‰ to 0.23 ± 0.01‰ in source materials. Accordingly, Cd sources along the river were constrained, i.e. traffic and industrial activities in the upper and middle reaches whereas agricultural activities in the lower reaches. Furthermore, the evaluation on ecological risk of heavy metals in sediment on basis of SQGs and DGT-labile concentrations demonstrated that Pb and Zn might pose higher risk on aquatic species. The present study confirmed that Cd isotopes were promising source tracer in environmental studies.

Dissolved organic matter (DOM) has important impacts on the transportation of antibiotics through chemical and biological processes in composting. The interaction between DOM and antibiotics is reciprocal. The interaction between DOM ligands and antibiotics could be characterized based on a technique combining parallel factor analysis (PARAFAC) and microbial community structure analysis. However, PARAFAC cannot reveal the dynamic changes in each DOM peak in one PARAFAC component under antibiotic stress. In this study, two-dimensional correlation spectroscopy (2DCOS) combined with PARAFAC and bacterial community diversity analyses were employed to reveal the effects of oxytetracycline (OTC) stress and the key microorganisms on the transformation of different fluorescent peaks from DOM PARAFAC components during chicken manure composting. The results showed that OTC inhibits the transformation between DOM PARAFAC components by inhibiting the core microbial activities involved in the transformation of DOM components. Protein-like components (C1 and C2) were more sensitive to OTC residue, and components with a high humification degree promoted the degradation of OTC. The interaction between special DOM PARAFAC components and certain bacteria affects the degradation of OTC. The DOM PARAFAC components A2(C1), B1(C2), B2(C2) and Z1(C4) enhanced OTC degradation by stimulating the genera Pseudomonas, Glycomyces and Hyphomicrobium. With these promising results, the true effect of DOM PARAFAC components on the degradation of OTC can be revealed, which is helpful for addressing antibiotic contamination to improve the bioavailability of compost products.

Biofumigation is an effective, non-chemical method to control soil-borne pests and diseases and to maximize crop yield. We studied the responses of soil bacterial and fungal communities, the soil’s nutritional state and strawberry yield, when the soil was biofumigated each year for five consecutive years using fresh chicken manure (BioFum). BioFum significantly increased the soil’s NH4+-N, NO3−-N, available P and K and organic matter. Fusarium spp. and Phytophthora spp. which are known to cause plant disease, were significantly decreased after BioFum. In addition, Biofum increased the soil’s temperature, enhanced chlorophyll levels in the leaves of strawberry plants, and the soluble sugar and ascorbic acid content in strawberry fruit. We used high-throughput gene sequencing to monitor changes in the soil’s bacterial and fungal communities. Although BioFum significantly decreased the diversity of these communities, it increased the relative abundance of some biological control agents in the phylum Actinobacteria and the genera Pseudomonas, Bacillus and Chaetomium. An increase in these biological control agents would reduce the incidence of soil-borne pathogens and plant disease. Although strawberry marketable yield using BioFum was higher in the first three years, the decline in the final two years could be due to the accumulation of P and K which may have delayed flowering and fruiting. Methods to overcome yield losses using BioFum need to be developed in the future. Our research, however, showed that BioFum enhanced soil fertility, reduced the presence of soil pathogens, increased the relative abundance of beneficial bacteria and fungi and improved strawberry quality. Unlike chemical soil treatments that can cause pest and disease resistance when used continuously over many years, our multi-year research program on BioFum showed that this treatment provided significant benefits to the soil, plant and strawberry fruit.

Trace elements are added to poultry feed to control infection and improve weight gain. However, the fate of these trace elements in poultry litter is poorly understood. Because poultry litter is applied as fertilizer in many agricultural regions, evaluation of the environmental processes that influence the mobility of litter-derived trace elements is critical for predicting if trace elements are retained in soil or released to water. This study examined the effect of dissolved organic carbon (DOC) in poultry litter leachate on the fate and transport of litter-derived elements (As, Cu, P and Zn) using laboratory column experiments with soil collected from the Delmarva Peninsula (Mid-Atlantic, USA), a region of intense poultry production. Results of the experiments showed that DOC enhanced the mobility of all of the studied elements. However, despite the increased mobility, 60–70% of Zn, As and P mass was retained within the soil. In contrast, almost all of the Cu was mobilized in the litter leachate experiments, with very little retention in soil. Overall, our results demonstrate that the mobility of As, Cu, Zn and P in soils which receive poultry litter application is strongly influenced by both litter leachate composition, specifically organic acids, and adsorption to soil. Results have implications for understanding fate and transport of trace elements released from litter application to soil water and groundwater, which can affect both human health and the environment.

High nitrogen (N) inputs in Chinese vegetable and cereal productions played key roles in increasing crop yields. However, emissions of the potent greenhouse gas nitrous oxide (N2O) and atmospheric pollutant nitric oxide (NO) increased too. For lowering the environmental costs of crop production, it is essential to optimize N strategies to maintain high crop productivity, while reducing the associated N losses. We performed a 2 year-round field study regarding the effect of different combinations of poultry manure and chemical N fertilizers on crop yields, N use efficiency (NUE) and N2O and NO fluxes from a Welsh onion-winter wheat system in the North China Plain. Annual N2O and NO emissions averaged 1.14–3.82 kg N ha⁻¹ yr⁻¹ (or 5.54–13.06 g N kg⁻¹ N uptake) and 0.57–1.87 kg N ha⁻¹ yr⁻¹ (or 2.78–6.38 g N kg⁻¹ N uptake) over all treatments, respectively. Both N2O and NO emissions increased linearly with increasing total N inputs, and the mean annual direct emission factors (EFd) were 0.39% for N2O and 0.19% for NO. Interestingly, the EFd for chemical N fertilizers (N2O: 0.42–0.48%; NO: 0.07–0.11%) was significantly lower than for manure N (N2O: 1.35%; NO: 0.76%). Besides, a negative power relationship between yield-scaled N2O, NO or N2O + NO emissions and NUE was observed, suggesting that improving NUE in crop production is crucial for increasing crop yields while decreasing nitrogenous gas release. Compared to the current farmers’ fertilization rate, alternative practices with reduced chemical N fertilizers increased NUE and decreased annual N2O + NO emissions substantially, while crop yields remained unaffected. As a result, annual yield-scaled N2O + NO emissions were reduced by > 20%. Our study shows that a reduction of current application rates of chemical N fertilizers by 30–50% does not affect crop productivity, while at the same time N2O and NO emissions would be reduced significantly.