A next-generation sequencing (NGS) approach, in conjunction with culture-based methods, was used to examine fungal and prokaryotic communities for the presence of potential pathogens in beach sands throughout Portugal. Culture-based fungal enumeration revealed low and variable concentrations of the species targeted (yeasts and dermatophytes), which were underrepresented in the community characterized by NGS targeting the ITS1 region. Conversely, NGS indicated that the potentially pathogenic species Purpureocillium liliacinum comprised nearly the entire fungal community. Culturable fecal indicator bacterial concentrations were low throughout the study and unrelated to communities characterized by NGS. Notably, the prokaryotic communities characterized revealed a considerable abundance of archaea. Results highlight differences in communities between methods in beach sand monitoring but indicate the techniques offer complementary insights. Thus, there is a need to leverage culture-based methods with NGS methods, using a toolbox approach, to determine appropriate targets and metrics for beach sand monitoring to adequately protect public health.

Sediments from the Gulf of Mexico (GOM) and the South China Sea (SCS) were analyzed. The low δ13 C values of pentamethylicosane (PMIs) and fatty acids (−81.3 to −85.2‰) were found in only the S-1 sample collected from the GOM, indicating that methanogenic archaea associated with gas hydrate formation contributed to the sediment organic matter. Principle component analysis of fatty acids suggested that similar microbial biomass was found in the S-1, S-9, O-3 and O-5 samples. However, a comparison of the alkanes, fatty acids, and alcohols indicated that the percentage of n-alkan-2-ols in the S-1 sample from the GOM was the highest, while n-alkanes and n-fatty acids were the highest percentages in other samples from the GOM and SCS. This finding suggests that microbial species or the oxidation/reduction environment of the sample site of S-1 were different from those of the other samples. The present study provides a basis for detecting gas hydrate sites on the seafloor of the SCS.

Nutrient loading is a leading cause of global seagrass decline, triggering shifts from seagrass- to macroalgal-dominance. Within seagrass meadows of Xincun Bay (South China Sea), we found that nutrient loading (due to fish farming) increased sediment microbial biomass and extracellular enzyme activity associated with carbon cycling (polyphenol oxidase, invertase and cellulase), with a corresponding decrease in percent sediment organic carbon (SOC), suggesting that nutrients primed microorganism and stimulated SOC remineralization. Surpisingly, however, the relative contribution of seagrass-derived carbon to bacteria (δ13Cbacteria) increased with nutrient loading, despite popular theory being that microbes switch to consuming macroalgae which are assumed to provide a more labile carbon source. Organic carbon sources of fungi were unaffected by nutrient loading. Overall, this study suggests that nutrient loading changes the relative contribution of seagrass and algal sources to SOC pools, boosting sediment microbial biomass and extracellular enzyme activity, thereby possibly changing seagrass blue carbon.

The “Loy Krathong” festival is a major annual Thai event that includes firework displays. It takes place on the evening of the full moon in the 12th month of the traditional Thai lunar calendar. Since fireworks are widely considered a major source of PAHs, it is considered reasonable to expect a significant increase in PAH levels during this event. The overall PAH profile at the six air quality observatories operated by the Pollution Control Department (PCD), Ministry of Natural Resources and Environment (MNRE), showed that the Kingdom of Thailand's atmosphere was dominated by 5–6-ring PAHs during the firework display period. A significant increase in ΣPAHs (153%) was observed during firework displays. A statistical analysis coupled with the application of diagnostic binary PAH ratios was conducted to determine whether the detected increase in PAH congeners during the festival period was due to firework combustion or whether it was a coincidental effect caused by vehicular exhausts, long-range atmospheric transportation, photolysis and chemical degradation. The average incremental lifetime cancer risk (ILCR) values of adults and children living in Bangkok as estimated by three different TEQs for ingestion, dermal contact, and inhalation exposure pathways were greatly lesser than the US EPA baseline, further highlighting that the cancer risk of bonfire night falls into the ‘‘acceptable level’’ range.

The distribution, sources and bioavailability of polycyclic aromatic hydrocarbons (PAHs) in sediment and sea urchin (Echinometra mathaei) from the intertidal zone of the northern Persian Gulf were investigated. Total PAH concentrations varied from 12.8 to 81.25 and from 16.7 to 35 μgKg−1 dry weight in sediment and Echinometra mathaei, respectively. The PAH concentrations can be classified as low. Source identification and apportionment using diagnostic ratios and principal component analysis demonstrate that the combustion of fossil fuels, road traffic, combustion of natural gas and biomass, and oil spill could be considered as the main sources of PAH contamination. The first PAH biota-sediment accumulation factors (BSAF) data from sediment to Echinometra mathaei in the intertidal zone of the northern Persian Gulf were calculated, indicating accumulation of both lower and higher molecular weight PAHs, with a preferential accumulation of lower molecular weight PAHs.

Surface sediments were collected from the main path of Kuroshio Current (KC) off eastern Taiwan (ETW), and laboratory incubation was conducted for the study of the nutrient exchange at the sediment-water interface. Exchange fluxes of NO3−-N, NO2−-N, NH4+-N, PO43−-P and SiO32−-Si under simulated site condition were −0.0866, 0.00146, 0.0634, −0.00812 and −0.181mmolm−2d−1, respectively. This indicated that sediments in the studied area might act as a source of NO2−-N and NH4+-N and a sink of NO3−-N, PO43−-P and SiO32−-Si. Factors affecting nutrient exchange fluxes were studied by changing incubation conditions. Compared with some coastal areas in China, the main path of KC off ETW showed relatively low nutrient exchange fluxes at the sediment-water interface. It could be inferred that the sediment-water exchange of nutrients in the main path of KC off ETW had little influence on the downstream nutrient transportation by KC year-round based on the results of this research.

This work is an overview of all available benthic data collected in the Algerian harbours between 1983 and 2001. So, total of 571 stations were reported in the 10 major Algerian harbours along the Algerian coast (1200km). Two main categories of harbours were distinguished according to their hydrodynamic regime and volume of water exchange between inner harbour basins and the entrance of the harbours. Univariate, multivariate, benthic indices and Biological Traits of Life approaches were applied on stations sampled in the late 1990s and long-term observations in six out of these ten harbours. These approaches assessed the main characteristics and ecological statuses from these south Mediterranean harbours. One of the main characteristics of the Algerian harbours was the very high species diversity (847 species). Although all the fauna was dominated by pollution-tolerant species; some harbours such as Bethioua and Djendjen hosted normal benthic communities as found in the open sea, but also included some pollution indicator species typical of a slight polluted system. On the contrary, the newly constructed port of Skikda showed perturbed benthic communities in relation to hydrocarbon pollution. Biological Traits of Life analysis reinforced the separation of benthic species along a gradient reflecting their sensitivity or tolerance to pollution. This response was related to an increase in organic matter content, probably associated with a general organic and metal contamination, from the entrance of the harbour to the innermost basins in areas with weak circulation, high sedimentation rate and concentrations of pollutants. Except for Oran harbour, where the poor to moderate ecological status remained unchanged with time, the other harbours showed an improvement or a slight degradation. A strategy of long-term monitoring should be promoted, based on a restricted and selected number of stations characteristic of the different basins and water masses occupying the harbours.

For experiments concerning the formation of oil–suspended particulate matter (SPM) aggregates (OSA), oil and sediment samples were collected from Campos Basin and six stations of Paraguaçu estuary, Todos os Santos Bay, Brazil, respectively. The sediments samples were analyzed for organic matter determined by the EMBRAPA method, nitrogen determined by the Kjeldahl method, and phosphorus determined by the method described by Aspila. The oil trapped in OSA was extracted following the method described by Moreira. The experiment showed a relationship between the amount of organic matter and OSA formation and consequently the dispersion of the studied oil. On the basis of the buoyancy of OSA and the ecotoxicological effects on pelagic and benthic community, the priority areas for application of remediation techniques are Cachoeira, Maragogipe, and Salinas da Margarida because of the large amount of oil that accumulated at the bottom of the experiment flask (5.85%, 27.95%, and 38,98%; 4.2%, 17.66%, and 32.64%; and 11.82%, 8.07%, and 10.91% respectively).

Anthropogenic debris results in detrimental interactions with many marine species. Several seabirds include debris items in their nests, which can lead to entanglement of chicks and adults, resulting in injury or death. Anthropogenic debris was found in 4–67% of kelp gull Larus dominicanus nests in seven colonies in the Western Cape, South Africa. Nests contained two types of litter: items included in the nest structure during construction (mainly ropes and straps), and regurgitated items (mainly bags and food wrappers) that probably accumulate primarily during the chick-rearing period. Debris used in nest construction was more likely to injure gulls, and was found mainly at coastal sites where there was little natural vegetation for construction. Distance to the nearest urban waste landfill significantly affected the occurrence of debris items in nests, especially dietary-derived items. The amount of debris in kelp gull nests highlights the need for improved debris management in South Africa.

Existing literature illustrates inconsistent responses of seagrasses to oil exposure, both in the field and in the laboratory. Here, we add a new study that combined morphometric, demographic and photophysiology assessments to determine the potential oiling impacts to eelgrass (Zostera marina) from the 2007 Cosco Busan event in San Francisco Bay. Shoot densities, reproductive status, and rhizome elongation of Z. marina were examined at sites with pre-spill data, and eelgrass photosynthetic efficiency was measured post-spill. Shoot densities and percent elongation of rhizome internodes formed after the oil spill varied but with no consistent relationship to adjacent shoreline cleanup assessment team (SCAT) oiling categories. Similarly, differences in seagrass photosynthetic efficiency were not consistent with SCAT oiling categories. While thresholds for negative impacts on seagrass in general remain to be defined, conclusive oiling indicators for degree and duration of exposure would be important considerations and need examination under controlled study.