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Tracking antimicrobial resistance indicator genes in wild flatfish from the English Channel and the North Sea area: A one health concern Texte intégral
2024
Bourdonnais, Erwan | Le Bris, Cédric | Brauge, Thomas | Midelet, Graziella
Antimicrobial resistance (AMR) is a burgeoning environmental concern demanding a comprehensive One Health investigation to thwart its transmission to animals and humans, ensuring food safety. Seafood, housing bacterial AMR, poses a direct threat to consumer health, amplifying the risk of hospitalization, invasive infections, and death due to compromised antimicrobial treatments. The associated antimicrobial resistance genes (ARGs) in diverse marine species can amass and transmit through various pathways, including surface contact, respiration, and feeding within food webs. Our research, focused on the English Channel and North Sea, pivotal economic areas, specifically explores the occurrence of four proposed AMR indicator genes (tet(A), blaTEM, sul1, and intI1) in a benthic food web. Analyzing 350 flatfish samples' skin, gills, and gut, our quantitative PCR (qPCR) results disclosed an overall prevalence of 71.4% for AMR indicator genes. Notably, sul1 and intI1 genes exhibited higher detection in fish skin, reaching a prevalence of 47.5%, compared to gills and gut samples. Proximity to major European ports (Le Havre, Dunkirk, Rotterdam) correlated with increased AMR gene frequencies in fish, suggesting these ports' potential role in AMR spread in marine environments. We observed a broad dispersion of indicator genes in the English Channel and the North Sea, influenced by sea currents, maritime traffic, and flatfish movements. In conclusion, sul1 and intI1 genes emerge as robust indicators of AMR contamination in the marine environment, evident in seawater and species representing a benthic food web. Further studies are imperative to delineate marine species' role in accumulating and transmitting AMR to humans via seafood consumption. This research sheds light on the urgent need for a concerted effort in comprehending and mitigating AMR risks in marine ecosystems within the context of One Health.
Afficher plus [+] Moins [-]Perfluoroalkyl Substances (Pfas) Occurrence, Concentrations and Spatial Distribution Along the French Mediterranean Coast and Lagoons, Based on Active Biomonitoring Texte intégral
2024
Herlory, Olivier | Briand, Marine | Munaron, Dominique | Boissery, Pierre | Giraud, Anaïs | Marchand, Philippe | Bouchoucha, Marc
Tracking PFAS in ecosystems is challenging. In this context, monitoring programs are crucial to fill data gaps, especially in marine environments, which are the ultimate outlets for these forever chemicals. The 2021 chemical contamination monitoring campaign along the French Mediterranean coast established a baseline for PFAS concentrations in mussels, with 90 % of measurements below quantification limits. When detected, long-chain PFCA's were predominant. Spatial distribution patterns suggested continuous PFAS inputs and complex dynamics, shaped by the influence of large watersheds and rivers (Rhône, Aude, Huveaune). Lapeyrade shallow lagoon stood out as the most contaminated site. Similar PFAS profiles in connected sites implied shared sources but raised questions about accumulation processes in mussels. While certain sites had evident sources (e.g., military airbase for Palo lagoon), others remained uncertain (e.g., Toulon bay). Coastal stations (Banyuls, Cap Agde, Brégançon, Pampelonne) showed PFAS contamination without clear onshore sources, possibly due to insufficient transportation process understanding.
Afficher plus [+] Moins [-]Antimicrobial resistance and geographical distribution of Staphylococcus sp. isolated from whiting (Merlangius merlangus) and seawater in the English Channel and the North sea Texte intégral
2024
Brauge, Thomas | Bourdonnais, Erwan | Trigueros, Sylvain | Cresson, Pierre | Debuiche, Sabine | Granier, Sophie A. | Midelet, Graziella
Staphylococcus is a significant food safety hazard. The marine environment serves as a source of food for humans and is subject to various human-induced discharges, which may contain Staphylococcus strains associated with antimicrobial resistance (AMR). The aim of this study was to assess the occurrence and geographical distribution of AMR Staphylococcus isolates in seawater and whiting (Merlangius merlangus) samples collected from the English Channel and the North Sea. We isolated and identified 238 Staphylococcus strains, including 12 coagulase-positive (CoPs) and 226 coagulase-negative (CoNs) strains. All CoPs isolates exhibited resistance to at least one of the 16 antibiotics tested. Among the CoNs strains, 52% demonstrated resistance to at least one antibiotic, and 7 isolates were classified as multi-drug resistant (MDR). In these MDR strains, we identified AMR genes that confirmed the resistance phenotype, as well as other AMR genes, such as quaternary ammonium resistance. One CoNS strain carried 9 AMR genes, including both antibiotic and biocide resistance genes. By mapping the AMR phenotypes, we demonstrated that rivers had a local influence, particularly near the English coast, on the occurrence of AMR Staphylococcus. The analysis of marine environmental parameters revealed that turbidity and phosphate concentration were implicated in the occurrence of AMR Staphylococcus. Our findings underscore the crucial role of wild whiting and seawater in the dissemination of AMR Staphylococcus within the marine environment, thereby posing a risk to human health.
Afficher plus [+] Moins [-]Trace element variations in mussels' shells from continent to sea: The St. Lawrence system, Canada Texte intégral
2024
Guillot, Alice | Barrat, Jean-alix | Olivier, Frédéric | Tremblay, Réjean | Saint-louis, Richard | Rouget, Marie Laure | Ben Salem, Douraied
Rare Earth Elements (REE) and several trace elements abundances in mussel's shells collected along the St. Lawrence River, the Estuary, and the Gulf of St. Lawrence (EGSL) reveal coherent chemical variations, with a sharp contrast between freshwater and seawater bivalves. In freshwater mussel's shells, Rare Earth Elements and Y (REY) patterns are rather flat. Their Mn and Ba concentrations are higher than those of EGSL mussel shells, which are much richer in Sr. Shale-normalized REY abundances in mussel's shells from the EGSL show positive anomalies in La and Y and well-marked negative anomalies in Ce, reflecting those of seawater. Prince Edward Island shells show light REE depletion relative to PAAS, positive La and Y anomalies, and negative Ce anomalies. Our data confirm the lack of detectable Gd pollution in the St. Lawrence River and in the EGSL, as well as Pb pollution at the mouth of the Saguenay Fjord and near Rimouski.
Afficher plus [+] Moins [-]Division and retention of floating plastic at river bifurcations Texte intégral
2024
van Thi, Khoa L. | van Emmerik, Tim H.M. | Vermeulen, Bart | Pham, Nhan Q. | Hoitink, A.J.F.
The transport of floating macroplastics (>2.5 cm) can be impacted by variations in hydrometeorological forcing. Several studies have demonstrated that river discharge, wind, and tides can either accelerate or impede the downstream travel path of plastic. However, there remains a substantial gap in our understanding of the impact of river geomorphological complexity on this process. In this context, the role that river bifurcations play in driving plastic dynamics under different hydrometeorological conditions is largely unexplored. Here, we show that specific plastic item categories react differently to the transport drivers, and bifurcation areas can function both as a retention and release site of plastic litter. We found that hard polyolefin appears to be the most responsive plastic to changes in flow discharge (ρ≈0.40, p≈0.01). Absolute wind velocity magnitude does not correlate to plastic transport. We explored correlations of the various plastic items types with wind vector components in all directions. Multilayer plastics correlated highest to the wind vector component that is most effective in driving plastics from an urban area to the river (ρ≈0.57, p≈0.0001). On a monthly scale, the bifurcation area retained up to 50% of the incoming upstream plastic flux. At other times, an additional 30% was released in the same area. Our results demonstrate how bifurcations distribute different plastic items types downstream under varied hydrometeorological conditions. These yields underscore the importance of assessing floating plastic transport in specific plastic item categories and taking river geomorphological complexity into account.
Afficher plus [+] Moins [-]Effect of an antidepressant on aquatic ecosystems in the presence of microplastics: A mesocosm study. Environmental Pollution Texte intégral
2024
Vasantha Raman, N. | Mekonen Belay, B. | South, Jane | Botha, T.L. | Pegg, J. | Khosa, D. | Mofu, L. | Walsh, G. | Jordaan, M.S. | Koelmans, A.A. | Teurlincx, S. | Helmsing, N.R. | de Jong, N. | van Donk, E. | Lürling, M.F.L.L.W. | Wepener, Victor | Fernandes, T.V. | de Senerpont Domis, Lisette
Emerging pollutants, such as pharmaceuticals and microplastics have become a pressing concern due to their widespread presence and potential impacts on ecological systems. To assess the ecosystem-level effects of these pollutants within a multi-stressor context, we simulated real-world conditions by exposing a near-natural multi-trophic aquatic food web to a gradient of environmentally relevant concentrations of fluoxetine and microplastics in large mesocosms over a period of more than three months. We measured the biomass and abundance of different trophic groups, as well as ecological functions such as nutrient availability and decomposition rate. To explore the mechanisms underlying potential community and ecosystem-level effects, we also performed behavioral assays focusing on locomotion parameters as a response variable in three species: Daphnia magna (zooplankton prey), Chaoborus flavicans larvae (invertebrate pelagic predator of zooplankton) and Asellus aquaticus (benthic macroinvertebrate), using water from the mesocosms. Our mesocosm results demonstrate that presence of microplastics governs the response in phytoplankton biomass, with a weak non-monotonic dose-response relationship due to the interaction between microplastics and fluoxetine. However, exposure to fluoxetine evoked a strong non-monotonic dose-response in zooplankton abundance and microbial decomposition rate of plant material. In the behavioral assays, the locomotion of zooplankton prey D. magna showed a similar non-monotonic response primarily induced by fluoxetine. Its predator C. flavicans, however, showed a significant non-monotonic response governed by both microplastics and fluoxetine. The behavior of the decomposer A. aquaticus significantly decreased at higher fluoxetine concentrations, potentially leading to reduced decomposition rates near the sediment. Our study demonstrates that effects observed upon short-term exposure result in more pronounced ecosystem-level effects following chronic exposure.
Afficher plus [+] Moins [-]Short-term impacts of polyethylene and polyacrylonitrile microplastics on soil physicochemical properties and microbial activity of a marine terrace environment in maritime Antarctica Texte intégral
2024
Oliveira de Miranda, Caik | Lelis Leal de Souza, José João | Gonçalves Reynaud Schaefer, Carlos Ernesto | Huerta Lwanga, Esperanza | Nadal Junqueira Villela, Fernando
Evidence of microplastic (MP) pollution in Antarctic terrestrial environments reinforces concerns about its potential impacts on soil, which plays a major role in ecological processes at ice-free areas. We investigated the effects of two common MP types on soil physicochemical properties and microbial responses of a marine terrace from Fildes Peninsula (King George Island, Antarctica). Soils were treated with polyethylene (PE) fragments and polyacrylonitrile (PAN) fibers at environmentally relevant doses (from 0.001% to 1% w w−1), in addition to a control treatment (0% w w−1), for 22 days in a pot incubation experiment under natural field conditions. The short-term impacts of MPs on soil physical, chemical and microbial attributes seem interrelated and were affected by both MP dose and type. The highest PAN fiber dose (0.1%) increased macro and total porosity, but decreased soil bulk density compared to control, whereas PE fragments treatments did not affect soil porosity. Soil respiration increased with increasing doses of PAN fibers reflecting impacts on physical properties. Both types of MPs increased microbial activity (fluorescein diacetate hydrolysis), decreased the cation exchange capacity but, especially PE fragments, increased Na+ saturation. The highest dose of PAN fibers and PE fragments increased total nitrogen and total organic carbon, respectively, and both decreased the soil pH. We discussed potential causes for our findings in this initial assessment and addressed the need for further research considering the complexity of environmental factors to better understand the cumulative impacts of MP pollution in Antarctic soil environments.
Afficher plus [+] Moins [-]Lower nitrate leaching from dairy cattle slurry compared to synthetic fertilizer calcium ammonium nitrate applied to grassland Texte intégral
2024
de Boer, Herman C. | van Mullekom, Mark | Smolders, Alfons J.P.
Nitrate leaching from agriculture can be reduced by the choice of fertilizer and a proper timing of its application. For permanent grassland grown under temperate conditions, nitrate leaching was hypothesized to be lower from dairy cattle slurry (CS) compared to synthetic fertilizer calcium ammonium nitrate (CAN), based on differences in chemical composition, consequential effects on nitrogen (N) conversion processes in soil, and resulting differences in synchronization of (nitrate) N availability and plant N uptake. We tested the hypothesis in a two-year field experiment on cut grassland on a leaching-sensitive sandy soil, fertilized each year with 320 kg ha−1 of plant-available N from either 100% top-dressed CAN or a combination of 40% from CAN and 60% from sod-injected CS, and measured effects on grass herbage yield, herbage N uptake, and nitrate concentration in pore water at 1.0 m depth. Our results show a comparable level of herbage N uptake for both treatments, allowing for a proper comparison of nitrate leaching at a similar level of plant-available N. Average nitrate concentration in pore water in the main leaching period (over winter) was after the first ‘dry’ growing season 44% lower for CS + CAN (41 mg l−1) compared to CAN only (73 mg l−1), and after the second ‘wet’ growing season 35% lower for CS + CAN (32 mg l−1) compared to CAN only (49 mg l−1). Nitrogen application increased nitrate concentration at 1.0 m depth not only in winter but also in the growing season. We conclude that for permanent grasslands in temperate regions, nitrate leaching from timely applied CS may be considerably lower than from CAN, which is different from previous assumptions.
Afficher plus [+] Moins [-]Assessing ecological responses to exposure to the antibiotic sulfamethoxazole in freshwater mesocosms Texte intégral
2024
Schuijt, Lara M. | van Drimmelen, Chantal K.E. | Buijse, Laura L. | van Smeden, Jasper | Wu, Dailing | Boerwinkel, Marie Claire | Belgers, Dick J.M. | Matser, Arrienne M. | Roessink, Ivo | Beentjes, Kevin K. | Trimbos, Krijn B. | Smidt, Hauke | Van den Brink, Paul J.
Antibiotics are a contaminant class of worldwide concern as they are frequently detected in aquatic ecosystems. To better understand the impacts of antibiotics on aquatic ecosystems, we conducted an outdoor mesocosm experiment in which aquatic communities were exposed to different concentrations of the antibiotic sulfamethoxazole (0, 0.15, 1.5, 15 and 150 μg/L). These concentrations include mean (0.15 μg/L) and maximum detected concentrations (15 and 150 μg/L) in aquatic ecosystems worldwide. Sulfamethoxazole was applied once a week for eight consecutive weeks to 1530 L outdoor mesocosms in the Netherlands, followed by an eight-week recovery period. We evaluated phytoplankton-, bacterial- and invertebrate responses during and after sulfamethoxazole exposure and assessed impacts on organic matter decomposition. Contrary to our expectations, consistent treatment-related effects on algal and bacterial communities could not be demonstrated. In addition, sulfamethoxazole did not significantly affect zooplankton and macroinvertebrate communities. However, some effects on specific taxa were observed, with an increase in Mesostoma flatworm abundance (NOEC of <0.15 μg/L). In addition, eDNA analyses indicated negative impacts on the insects Odonata at a sulfamethoxazole concentration of 15 μg/L. Overall, environmentally relevant sulfamethoxazole concentration did not result in direct or indirect impairment of entire aquatic communities and ecological processes in our mesocosms. However, several specific macroinvertebrate taxa demonstrated significant (in)direct effects from sulfamethoxazole. Comparison of the results with the literature showed inconsistent results between studies using comparable, environmentally relevant, concentrations. Therefore, our study highlights the importance of testing the ecological impacts of pharmaceuticals (such as sulfamethoxazole) across multiple trophic levels spanning multiple aquatic communities, to fully understand its potential ecological threats.
Afficher plus [+] Moins [-]Metal contamination, their ecological risk, and relationship with other variables in surface sediments of urban rivers in a big city in Asia: case study of Hanoi, Vietnam Texte intégral
2024
Phung, Thi Xuan Binh | Le, Thi Phuong Quynh | da Le, Nhu | Hoang, Thi Thu Ha | Nguyen, Thi Mai Huong | Rochelle-Newall, Emma | Nguyen, Thi Anh Huong | Duong, Thi Thuy | Pham, Thi Mai Huong | Nguyen, Tien Dat | Electric Power University (EPU) | Institute of Natural Products Chemistry (INPC) ; Vietnam Academy of Science and Technology (VAST) | Vietnam Academy of Science and Technology (VAST) | Institut d'écologie et des sciences de l'environnement de Paris (iEES Paris) ; Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | University of Science and Technology of Hanoi (USTH)
International audience
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