Molecular tools in microbial community analysis give access to information on catabolic potential and diversity of microbes. Applied in bioremediation, they could provide a new dimension to improve pollution control. This concept has been demonstrated in the study using atrazine as model pollutant. Bioremediation of the herbicide, atrazine, was analyzed in microcosm studies by bioaugmentation, biostimulation and natural attenuation. Genes from the atrazine degrading pathway atzA/B/C/D/E/F, trzN, and trzD were monitored during the course of treatment and results demonstrated variation in atzC, trzD and trzN genes with time. Change in copy number of trzN gene under different treatment processes was demonstrated by real-time PCR. The amplified trzN gene was cloned and sequence data showed homology to genes reported in Arthrobacter and Nocardioides. Results demonstrate that specific target genes can be monitored, quantified and correlated to degradation analysis which would help in predicting the outcome of any bioremediation strategy.

The dissolution of ZnO nanoparticles (nano-ZnO) plays an important role in the toxicity of nano-ZnO to the aquatic organisms. The effects of water chemistry such as pH, ionic components, and dissolved organic matter (DOM) on the dissolution of nano-ZnO and its toxicity to Escherichia coli (E. coli) were investigated in synthetic and natural water samples. The results showed that the toxicity of nano-ZnO to E. coli depended on not only free Zn2+ but also the coexisting cations which could reduce the toxicity of Zn2+. Increasing solution pH, HPO42−, and DOM reduced the concentration of free Zn2+ released from nano-ZnO, and thus lowered the toxicity of nano-ZnO. In addition, both Ca2+ and Mg2+ dramatically reduced the toxicity of Zn2+ to E. coli. These results highlight the importance of water chemistry on the toxicity evaluation of nano-ZnO in natural waters.

Road-side aquatic ecosystems in North America are annually polluted with millions of tons of road deicing salts, which threaten the survival of amphibians which live and breed in these habitats. While much is known of the effects of NaCl, little is known of the second most-commonly used deicer, MgCl2, which is now used exclusively in parts of the continent. Here we report that environmentally relevant concentrations of both NaCl and MgCl2 cause increased incidence of developmental deformities in rough-skinned newt hatchlings that developed embryonically in these salts. In addition, we provide some of the first quantification of severity of different deformities, and reveal that increased salt concentrations increase both deformity frequency and severity. Our work contributes to the growing body of literature that suggests salamanders and newts are particularly vulnerable to salt, and that the emerging pollutant, MgCl2 is comparable in its effects to the more traditionally-used NaCl.

This study assessed concentrations and investigated potential source regions for PCBs, PBDEs, and organochlorine pesticides in Acadia National Park, Maine, USA. Back-trajectories and potential source contribution function (PSCF) values were used to map potential source areas for total-PCBs, BDE-47, and 10 organochlorine pesticides. The constructed PSCF maps showed that ANP receives high pollutant concentrations in air masses that travel along four main pathways: (1) from the SW along the eastern Atlantic seaboard, (2) from the WSW over St. Louis, and Columbus regions, (3) from the west over Chicago, and Toronto regions, and (4) from WNW to NNW over the Great Lakes, and Quebec regions. Transport of all studied pollutants were equally distributed between the first three pathways, with only minor contributions from the last pathway. This study concludes that the high-pollutant concentrations arriving at ANP do not exclusively originate from the major urban centers along the eastern Atlantic seaboard.

Halocarbons including chloroform (CHCl3), trichloroethylene (C2HCl3), tetrachloroethylene (C2Cl4), chlorodibromomethane (CHBr2Cl) and bromoform (CHBr3) were measured in the Yellow Sea (YS) and the East China Sea (ECS) during spring 2011. The influences of chlorophyll a, salinity and nutrients on the distributions of these gases were examined. Elevated levels of these gases in the coastal waters were attributed to anthropogenic inputs and biological release by phytoplankton. The vertical distributions of these gases in the water column were controlled by different source strengths and water masses. Using atmospheric concentrations measured in spring 2012 and seawater concentrations obtained from this study, the sea-to-air fluxes of these gases were estimated. Our results showed that the emissions of C2HCl3, C2Cl4, CHBr2Cl, and CHBr3 from the study area could account for 16.5%, 10.5%, 14.6%, and 3.5% of global oceanic emissions, respectively, indicating that the coastal shelf may contribute significantly to the global oceanic emissions of these gases.

Summer minima and autumn/winter maxima in nitrate concentrations in rivers are reputedly due to high plant uptake of nitrate from soils in summer. A novel alternative hypothesis is tested here for soils under grass. By summer, residual readily mineralizable plant litter from the previous autumn/winter is negligible and fresh litter input low. Consequently little mineral-N is produced in the soil. Water-soluble and KCl-extractable mineral N in fresh soils and soils incubated outdoors for 7 days have been monitored over 12 months for soil transects at two permanent grassland sites near York, UK, using 6 replicates throughout. Vegetation-free soil is shown to produce very limited mineral-N in summer, despite the warm, moist conditions. Litter accumulates in autumn/winter and initially its high C:N ratio favours N accumulation in the soil. It is also shown that mineral-N generated monthly in situ in soil substantially exceeds the monthly mineral-N inputs via wet deposition at the sites.

We employed stable isotope probing (SIP) with 13C-labeled hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) to identify active microorganisms responsible for RDX biodegradation in groundwater microcosms. Sixteen different 16S rRNA gene sequences were derived from microcosms receiving 13C-labeled RDX, suggesting the presence of microorganisms able to incorporate carbon from RDX or its breakdown products. The clones, residing in Bacteroidia, Clostridia, α-, β- and δ-Proteobacteria, and Spirochaetes, were different from previously described RDX degraders. A parallel set of microcosms was amended with cheese whey and RDX to evaluate the influence of this co-substrate on the RDX-degrading microbial community. Cheese whey stimulated RDX biotransformation, altered the types of RDX-degrading bacteria, and decreased microbial community diversity. Results of this study suggest that RDX-degrading microorganisms in groundwater are more phylogenetically diverse than what has been inferred from studies with RDX-degrading isolates.

Sites contaminated with mixtures of metals, metalloids and organics are difficult to remediate as each contaminant type may require a different treatment. Biochar, with high metal sorption capacity, used singly and in combination with iron filings, is investigated in microcosm trials to immobilise metal(loid)s within a contaminated spoil, thereby enabling revegetation and degradation of organic pollutants. A mine spoil, contaminated with heavy metals, arsenic and spiked with phenanthrene was treated with either 1%w/w biochar, 5%w/w iron or their combination, enhancing phenanthrene degradation by 44–65%. Biochar treatment reduced Cu leaching and enabled sunflower growth, but had no significant effect on As mobility. Iron treatment reduced Cu and As leaching but negatively impacted soil structure and released high levels of Fe causing sunflower plant mortality. The combined treatment reduced both Cu and As leaching and enabled sunflower growth suggesting this could be a useful approach for treating co-contaminated sites.

Lignin derived macromolecular compounds are the main constituents responsible for the hazardous effects of discharged effluents from the pulp and paper industry in receiving waters. It was shown by ultraviolet–visible (UV–vis) and fluorescence spectroscopies that a selective photodegradation of these structures occurred upon irradiation of fulvic acids (FA) from a kraft pulp mill effluent. Though photodegradation was not remarkably affected by the presence of the natural photosensitizer nitrate, it was inhibited under the presence of chloride. These results indicate that the fate of macromolecular organic matter from kraft pulp mill effluents may be different depending on the type of receiving waters, having a higher persistence when effluents are discharged in estuarine or marine waters than when they are discharged in fresh water.

Polychaete worms are abundant in many mudflats but their importance to coastal food web Hg biomagnification is not known. We sampled sediments and polychaete worms from mudflats in the Bay of Fundy to investigate the bioaccumulation of mercury (Hg) and methylmercury (MeHg) in the coastal invertebrate food web. Hg concentrations in the sediments were low (<20 μg kg−1). Labile Hg (methanol/KOH sediment extraction) in surface sediments (0–1 cm) was positively correlated with Hg bioaccumulation by surface sediment-ingesting polychaetes but, surprisingly, there was a negative correlation between δ15N (i.e. trophic level) and THg bioaccumulation factors in polychaete worms. Worms feeding on deeper sediments contained the greatest MeHg concentrations (69.6 μg kg−1). Polychaetes are an important vector for Hg biomagnification to the coastal avian food web. This research demonstrates that feeding depth and method of feeding are more important than trophic position or sediment Hg concentrations for predicting Hg bioaccumulation.