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Ontology: a tool to ease communication and reveal hidden knowledge -Application to nature-based solutions Texte intégral
2022
Guillaume, S | Forquet, N | Pueyo-Ros, J | Comas, J | Réduire, valoriser, réutiliser les ressources des eaux résiduaires (UR REVERSAAL) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Instituto Catalán de Investigación del Agua = Catalan Institute for Water Research (ICRA) ; Universitat de Girona = University of Girona (UdG) | INRAE | RESEED | INSA/Lyon (National Institute of Applied Sciences) | INSA/Lyon (Laboratory Waste Water, Environment, Pollution)
International audience | The implementation of Nature-based Solutions (NBS) in cities has shifted to an integrated approach paradigm, raising the need for a shared, explicit and formal representation of knowledge on NBS in urban water management. A solution is building an ontology: it is a representation that merges data and expert knowledge, prevents miscommunication, handles heterogeneous data types and formats, and can draw inferences. The ontology we present here was focused on describing a water treatment chain (core ontology), classifying NBS (notably Treatment Wetlands (TW)) and treatment mechanisms. Its construction has mobilized expert knowledge, existing ontologies and explicitation of relations between concepts, sometimes from different knowledge domains: technical, geographical, socio-environmental. The ontology is not only for description of NBS in urban water management, but also for better future database structuration and modelling purposes (for predictions in a decision-making support tool). The ontology will improve from iterative expert feedback.
Afficher plus [+] Moins [-]Advantages and limits to copper phytoextraction in vineyards Texte intégral
2022
Cornu, Jean-Yves | Waterlot, Christophe | Lebeau, Thierry | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 (LGCgE) ; Université d'Artois (UA)-Université de Lille-Ecole nationale supérieure Mines-Télécom Lille Douai (IMT Lille Douai) ; Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-JUNIA (JUNIA) ; Université catholique de Lille (UCL)-Université catholique de Lille (UCL) | Laboratoire de Planétologie et Géosciences [UMR_C 6112] (LPG) ; Le Mans Université (UM)-Université d'Angers (UA)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Nantes université - UFR des Sciences et des Techniques (Nantes univ - UFR ST) ; Nantes Université - pôle Sciences et technologie ; Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)-Nantes Université - pôle Sciences et technologie ; Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)
Advantages and limits to copper phytoextraction in vineyards Texte intégral
2022
Cornu, Jean-Yves | Waterlot, Christophe | Lebeau, Thierry | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 (LGCgE) ; Université d'Artois (UA)-Université de Lille-Ecole nationale supérieure Mines-Télécom Lille Douai (IMT Lille Douai) ; Institut Mines-Télécom [Paris] (IMT)-Institut Mines-Télécom [Paris] (IMT)-JUNIA (JUNIA) ; Université catholique de Lille (UCL)-Université catholique de Lille (UCL) | Laboratoire de Planétologie et Géosciences [UMR_C 6112] (LPG) ; Le Mans Université (UM)-Université d'Angers (UA)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Nantes université - UFR des Sciences et des Techniques (Nantes univ - UFR ST) ; Nantes Université - pôle Sciences et technologie ; Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)-Nantes Université - pôle Sciences et technologie ; Nantes Université (Nantes Univ)-Nantes Université (Nantes Univ)
International audience | Copper (Cu) contamination of soils may alter the functioning and sustainability of vineyard ecosystems. Cultivating Cu-extracting plants in vineyard inter-rows, or phytoextraction, is one possible way currently under consideration in agroecology to reduce Cu contamination of vineyard topsoils. This option is rarely used, mainly because Cu phytoextraction yields are too low to significantly reduce contamination due to the relatively "low" phytoavailability of Cu in the soil (compared to other trace metals) and its preferential accumulation in the roots of most extracting plants. This article describes the main practices and associated constraints that could theoretically be used to maximize Cu phytoextraction at field scale, including the use of Cu-accumulating plants grown (i) with acidifying plants (e.g., leguminous plants), and/or (ii) in the presence of acidifying fertilizers (ammonium, elemental sulfur), or (iii) with soluble "biochelators" added to the soil such as natural humic substances or metabolites produced by rhizospheric bacteria such as siderophores, in the inter-rows. This discussion article also provides an overview of the possible ways to exploit Cu-enriched biomass, notably through ecocatalysis or biofortification of animal feed.
Afficher plus [+] Moins [-]Advantages and limits to copper phytoextraction in vineyards Texte intégral
2022
Cornu, Jean-Yves | Waterlot, Christophe | Lebeau, Thierry
Copper (Cu) contamination of soils may alter the functioning and sustainability of vineyard ecosystems. Cultivating Cu-extracting plants in vineyard inter-rows, or phytoextraction, is one possible way currently under consideration in agroecology to reduce Cu contamination of vineyard topsoils. This option is rarely used, mainly because Cu phytoextraction yields are too low to significantly reduce contamination due to the relatively “low” phytoavailability of Cu in the soil (compared to other trace metals) and its preferential accumulation in the roots of most extracting plants. This article describes the main practices and associated constraints that could theoretically be used to maximize Cu phytoextraction at field scale, including the use of Cu-accumulating plants grown (i) with acidifying plants (e.g., leguminous plants), and/or (ii) in the presence of acidifying fertilizers (ammonium, elemental sulfur), or (iii) with soluble “biochelators” added to the soil such as natural humic substances or metabolites produced by rhizospheric bacteria such as siderophores, in the inter-rows. This discussion article also provides an overview of the possible ways to exploit Cu-enriched biomass, notably through ecocatalysis or biofortification of animal feed.
Afficher plus [+] Moins [-]Modelling the response of urban lichens to broad-scale changes in air pollution and climate Texte intégral
2022
Rocha, Bernardo | Matos, Paula | Giordani, Paolo | Piret, Lõhmus | Branquinho, Cristina | Casanelles-Abella, Joan | Aleixo, Cristiana | Deguines, Nicolas | Hallikma, Tiit | Laanisto, Lauri | Moretti, Marco | Alós Ortí, Marta | Samson, Roeland | Tryjanowski, Piotr | Pinho, Pedro | Centre for Ecology - Evolution and Environmental Changes (cE3c) ; Universidade de Lisboa = University of Lisbon = Université de Lisbonne (ULISBOA) | Centro de Estudos Geográficos (CEG) ; Universidade de Lisboa = University of Lisbon = Université de Lisbonne (ULISBOA) | Università degli studi di Genova = University of Genoa (UniGe) | Institute of Ecology and Earth Sciences [Tartu] ; Faculty of Science and Technology [University of Tartu] ; Tartu Ülikool = University of Tartu [Estonie]-Tartu Ülikool = University of Tartu [Estonie] | Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Institute of Terrestrial Ecosystems (ITES) ; Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich) | Ecologie Systématique et Evolution (ESE) ; AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) | Écologie, Évolution, Symbiose [Équipe du laboratoire EBI Poitiers] (EES) ; Écologie et biologie des interactions [UMR 7267] (EBI [Poitiers]) ; Université de Poitiers = University of Poitiers (UP)-Centre National de la Recherche Scientifique (CNRS)-Université de Poitiers = University of Poitiers (UP)-Centre National de la Recherche Scientifique (CNRS) | Institute of Agricultural and Environmental Sciences (IAES) ; Estonian University of Life Sciences (EMU) | University of Antwerp (UA) | Poznan University of Life Sciences (Uniwersytet Przyrodniczy w Poznaniu) (PULS) | ANR-16-EBI3-0012,BIOVEINS,Connectivity of green and blue infrastructures: living veins for biodiverse and healthy cities(2016)
Modelling the response of urban lichens to broad-scale changes in air pollution and climate Texte intégral
2022
Rocha, Bernardo | Matos, Paula | Giordani, Paolo | Piret, Lõhmus | Branquinho, Cristina | Casanelles-Abella, Joan | Aleixo, Cristiana | Deguines, Nicolas | Hallikma, Tiit | Laanisto, Lauri | Moretti, Marco | Alós Ortí, Marta | Samson, Roeland | Tryjanowski, Piotr | Pinho, Pedro | Centre for Ecology - Evolution and Environmental Changes (cE3c) ; Universidade de Lisboa = University of Lisbon = Université de Lisbonne (ULISBOA) | Centro de Estudos Geográficos (CEG) ; Universidade de Lisboa = University of Lisbon = Université de Lisbonne (ULISBOA) | Università degli studi di Genova = University of Genoa (UniGe) | Institute of Ecology and Earth Sciences [Tartu] ; Faculty of Science and Technology [University of Tartu] ; Tartu Ülikool = University of Tartu [Estonie]-Tartu Ülikool = University of Tartu [Estonie] | Swiss Federal Institute for Forest, Snow and Landscape Research WSL | Institute of Terrestrial Ecosystems (ITES) ; Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich) | Ecologie Systématique et Evolution (ESE) ; AgroParisTech-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS) | Écologie, Évolution, Symbiose [Équipe du laboratoire EBI Poitiers] (EES) ; Écologie et biologie des interactions [UMR 7267] (EBI [Poitiers]) ; Université de Poitiers = University of Poitiers (UP)-Centre National de la Recherche Scientifique (CNRS)-Université de Poitiers = University of Poitiers (UP)-Centre National de la Recherche Scientifique (CNRS) | Institute of Agricultural and Environmental Sciences (IAES) ; Estonian University of Life Sciences (EMU) | University of Antwerp (UA) | Poznan University of Life Sciences (Uniwersytet Przyrodniczy w Poznaniu) (PULS) | ANR-16-EBI3-0012,BIOVEINS,Connectivity of green and blue infrastructures: living veins for biodiverse and healthy cities(2016)
International audience | To create more resilient cities, it is important that we understand the effects of the global change drivers in cities. Biodiversity-based ecological indicators (EIs) can be used for this, as biodiversity is the basis of ecosystem structure, composition, and function. In previous studies, lichens have been used as EIs to monitor the effects of global change drivers in an urban context, but only in single-city studies. Thus, we currently do not understand how lichens are affected by drivers that work on a broader scale. Therefore, our aim was to quantify the variance in lichen biodiversity-based metrics (taxonomic and trait-based) that can be explained by environmental drivers working on a broad spatial scale, in an urban context where local drivers are superimposed. To this end, we performed an unprecedented effort to sample epiphytic lichens in 219 green spaces across a continental gradient from Portugal to Estonia. Twenty-six broad-scale drivers were retrieved, including air pollution and bio-climatic variables, and their dimensionality reduced by means of a principal component analysis (PCA). Thirty-eight lichen metrics were then modelled against the scores of the first two axes of each PCA, and their variance partitioned into pollution and climate components. For the first time, we determined that 15% of the metric variance was explained by broad-scale drivers, with broad-scale air pollution showing more importance than climate across the majority of metrics. Taxonomic metrics were better explained by air pollution, as expected, while climate did not surpass air pollution in any of the trait-based metric groups. Consequently, 85% of the metric variance was shown to occur at the local scale. This suggests that further work is necessary to decipher the effects of climate change. Furthermore, although drivers working within cities are prevailing, both spatial scales must be considered simultaneously if we are to use lichens as EIs in cities at continental to global scales.
Afficher plus [+] Moins [-]Modelling the response of urban lichens to broad-scale changes in air pollution and climate Texte intégral
2022
Rocha, Bernardo | Matos, Paula | Giordani, Paolo | Piret, Lõhmus | Branquinho, Cristina | Casanelles-Abella, Joan | Aleixo, Cristiana | Deguines, Nicolas | Hallikma, Tiit | Laanisto, Lauri | Moretti, Marco | Alós Ortí, Marta | Samson, Roeland | Tryjanowski, Piotr | Pinho, Pedro
To create more resilient cities, it is important that we understand the effects of the global change drivers in cities. Biodiversity-based ecological indicators (EIs) can be used for this, as biodiversity is the basis of ecosystem structure, composition, and function. In previous studies, lichens have been used as EIs to monitor the effects of global change drivers in an urban context, but only in single-city studies. Thus, we currently do not understand how lichens are affected by drivers that work on a broader scale. Therefore, our aim was to quantify the variance in lichen biodiversity-based metrics (taxonomic and trait-based) that can be explained by environmental drivers working on a broad spatial scale, in an urban context where local drivers are superimposed. To this end, we performed an unprecedented effort to sample epiphytic lichens in 219 green spaces across a continental gradient from Portugal to Estonia. Twenty-six broad-scale drivers were retrieved, including air pollution and bio-climatic variables, and their dimensionality reduced by means of a principal component analysis (PCA). Thirty-eight lichen metrics were then modelled against the scores of the first two axes of each PCA, and their variance partitioned into pollution and climate components. For the first time, we determined that 15% of the metric variance was explained by broad-scale drivers, with broad-scale air pollution showing more importance than climate across the majority of metrics. Taxonomic metrics were better explained by air pollution, as expected, while climate did not surpass air pollution in any of the trait-based metric groups. Consequently, 85% of the metric variance was shown to occur at the local scale. This suggests that further work is necessary to decipher the effects of climate change. Furthermore, although drivers working within cities are prevailing, both spatial scales must be considered simultaneously if we are to use lichens as EIs in cities at continental to global scales. | info:eu-repo/semantics/publishedVersion
Afficher plus [+] Moins [-]A study of trophic structure, physiological condition and mercury biomagnification in swordfish (Xiphias gladius): Evidence of unfavourable conditions for the swordfish population in the Western Mediterranean Texte intégral
2022
Biton-Porsmoguer, Sebastián | Bănaru, Daniela | Harmelin-Vivien, Mireille | Béarez, Philippe | Bouchoucha, Marc | Marco-Miralles, Françoise | Marquès, Montse | Lloret, Josep
A study of trophic structure, physiological condition and mercury biomagnification in swordfish (Xiphias gladius): Evidence of unfavourable conditions for the swordfish population in the Western Mediterranean Texte intégral
2022
Biton-Porsmoguer, Sebastián | Bănaru, Daniela | Harmelin-Vivien, Mireille | Béarez, Philippe | Bouchoucha, Marc | Marco-Miralles, Françoise | Marquès, Montse | Lloret, Josep
International audience | Studies integrating trophic ecology, physiological condition and accumulation of heavy metals in top predators, such as swordfish, are needed to better understand the links between them and the risk to humans associated with consumption of these fish. This research focuses on the swordfish of the Catalan Sea and follows a multi method approach that considers their diet, their liver lipid content, and mercury accumulation in their bodies as well as in their prey. The aim is to highlight the links between trophic ecology, physiology (fish condition), and ecotoxicology. Results indicate that poor condition of swordfish based on size and the levels of lipid in the liver, and the high Hg levels accumulated to the trophic web (particularly from cephalopods) may indicate potential unfavourable feeding and reproduction conditions for swordfish in the NW Mediterranean and that this warrants further investigation.
Afficher plus [+] Moins [-]A study of trophic structure, physiological condition and mercury biomagnification in swordfish (Xiphias gladius): Evidence of unfavourable conditions for the swordfish population in the Western Mediterranean Texte intégral
2022
Biton-Porsmoguer, Sebastián | Bănaru, Daniela | Harmelin-Vivien, M. L. (Mireille L.) | Béarez, Philippe | Bouchoucha, Marc | Marco-Miralles, Françoise | Marquès, Montse | Lloret, Josep
Studies integrating trophic ecology, physiological condition and accumulation of heavy metals in top predators, such as swordfish, are needed to better understand the links between them and the risk to humans associated with consumption of these fish. This research focuses on the swordfish of the Catalan Sea and follows a multi method approach that considers their diet, their liver lipid content, and mercury accumulation in their bodies as well as in their prey. The aim is to highlight the links between trophic ecology, physiology (fish condition), and eco-toxicology. Results indicate that poor condition of swordfish based on size and the levels of lipid in the liver, and the high Hg levels accumulated to the trophic web (particularly from cephalopods) may indicate potential unfavourable feeding and reproduction conditions for swordfish in the NW Mediterranean and this warrants further investigation.
Afficher plus [+] Moins [-]Impact of returning scientific cruises and prolonged on-site presence on litter abundance at the deep-sea nodule fields in the Peru Basin Texte intégral
2022
Cuvelier, Daphne | Ramalho, Sofia P | Purser, Autun | Haeckel, Matthias
Impact of returning scientific cruises and prolonged on-site presence on litter abundance at the deep-sea nodule fields in the Peru Basin Texte intégral
2022
Cuvelier, Daphne | Ramalho, Sofia P | Purser, Autun | Haeckel, Matthias
Marine litter can be found along coasts, continental shelves and slopes, down into the abyss. The absence of light, low temperatures and low energy regimes characterising the deeper habitats ensure the persistence of litter over time. Therefore, manmade items within the deep sea will likely accumulate to increasing quantities. Here we report the litter abundance encountered at the Pacific abyssal nodule fields from the Peru Basin at 4150 m depth. An average density of 2.67 litter items/ha was observed. Litter composed of plastic was the most abundant followed by metal and glass. At least 58 % of the items observed could be linked to the research expeditions conducted in the area and appeared to be mostly accidental disposals from ships. The data gathered was used to address temporal trends in litter abundance as well as the impact of human on-site presence and return cruises in the context of future deep-sea mining efforts.
Afficher plus [+] Moins [-]Impact of returning scientific cruises and prolonged on-site presence on litter abundance at the deep-sea nodule fields in the Peru Basin Texte intégral
2022
Cuvelier, Daphne | Ramalho, Sofia P. | Purser, Autun | Haeckel, Matthias
Marine litter can be found along coasts, continental shelves and slopes, down into the abyss. The absence of light, low temperatures and low energy regimes characterising the deeper habitats ensure the persistence of litter over time. Therefore, manmade items within the deep sea will likely accumulate to increasing quantities. Here we report the litter abundance encountered at the Pacific abyssal nodule fields from the Peru Basin at 4150 m depth. An average density of 2.67 litter items/ha was observed. Litter composed of plastic was the most abundant followed by metal and glass. At least 58 % of the items observed could be linked to the research expeditions conducted in the area and appeared to be mostly accidental disposals from ships. The data gathered was used to address temporal trends in litter abundance as well as the impact of human on-site presence and return cruises in the context of future deep-sea mining efforts.
Afficher plus [+] Moins [-]Impacts of chemical stress, season, and climate change on the flounder population of the highly anthropised Seine estuary (France) Texte intégral
2022
Laurent, Jennifer | Lavergne, Edouard | Couteau, Jérôme | Le Floch, Stéphane | Ouddane, Baghdad | Cachot, Jérôme | Davail, Blandine | Clérandeau, Christelle | Devin, Simon | Fisson, Cédric | Devaux, Alain | Amara, Rachid | Diop, Mamadou | Pichereau, Vianney | Laroche, Jean | Laboratoire des Sciences de l'Environnement Marin (LEMAR) (LEMAR) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS) | TOXEM | Centre de documentation de recherche et d'expérimentations sur les pollutions accidentelles des eaux (Cedre) ; Cedre | Laboratoire Avancé de Spectroscopie pour les Intéractions la Réactivité et l'Environnement - UMR 8516 (LASIRE) ; Institut de Chimie - CNRS Chimie (INC-CNRS)-Université de Lille-Centre National de la Recherche Scientifique (CNRS) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC) ; Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS) | Groupement d’Intérêt Public Seine-Aval (GIP-Seine-Aval) | LEHNA - Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés [équipe IAPHY] (LEHNA IAPHY) ; Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187 (LOG) ; Institut national des sciences de l'Univers (INSU - CNRS)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Ile-de-France]) | Université du Littoral Côte d'Opale (ULCO) | This work was funded by the project “Seine Aval 6 – HQFish”.
Impacts of chemical stress, season, and climate change on the flounder population of the highly anthropised Seine estuary (France) Texte intégral
2022
Laurent, Jennifer | Lavergne, Edouard | Couteau, Jérôme | Le Floch, Stéphane | Ouddane, Baghdad | Cachot, Jérôme | Davail, Blandine | Clérandeau, Christelle | Devin, Simon | Fisson, Cédric | Devaux, Alain | Amara, Rachid | Diop, Mamadou | Pichereau, Vianney | Laroche, Jean | Laboratoire des Sciences de l'Environnement Marin (LEMAR) (LEMAR) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS) | TOXEM | Centre de documentation de recherche et d'expérimentations sur les pollutions accidentelles des eaux (Cedre) ; Cedre | Laboratoire Avancé de Spectroscopie pour les Intéractions la Réactivité et l'Environnement - UMR 8516 (LASIRE) ; Institut de Chimie - CNRS Chimie (INC-CNRS)-Université de Lille-Centre National de la Recherche Scientifique (CNRS) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC) ; Institut national des sciences de l'Univers (INSU - CNRS)-Université de Lorraine (UL)-Centre National de la Recherche Scientifique (CNRS) | Groupement d’Intérêt Public Seine-Aval (GIP-Seine-Aval) | LEHNA - Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés [équipe IAPHY] (LEHNA IAPHY) ; Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire d’Océanologie et de Géosciences (LOG) - UMR 8187 (LOG) ; Institut national des sciences de l'Univers (INSU - CNRS)-Université du Littoral Côte d'Opale (ULCO)-Université de Lille-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Ile-de-France]) | Université du Littoral Côte d'Opale (ULCO) | This work was funded by the project “Seine Aval 6 – HQFish”.
International audience | The main objective of this study was to improve our knowledge on the responses of fish populations to multistress (diffuse pollution and warming waters) in estuaries. Adult flounders were caught in two estuaries in the Eastern English Channel: the heavily polluted Seine estuary vs the moderately contaminated Canche estuary. Fish samplings were conducted in January just before the reproduction period, and in July when gonads were at rest. The overall rise in coastal winter water temperatures detected over the Channel impairs the flounder's phenology of reproduction in the two estuaries, inducing a delay of maturation process and probably also spawning. The higher liver histopathology index in Seine vs Canche could be the consequence of the fish exposition to a complex cocktail of contaminants in a strongly industrialized estuary. Higher levels of neurotoxicity, gill lipid peroxidation, and liver EROD activity were observed in Seine vs Canche. Furthermore, a possible impairment in mitochondrial metabolism was suggested in the Seine flounder population. We confirmed in this study the potential role of two membrane lipids (sphingomyelin and phosphatidylserine) in the resistance towards oxidative stress in Seine and Canche. Finally, we suggest that the Seine flounder population (and possibly the connected Eastern English Channel flounder populations over the French Coast) could be seriously impacted in the future by multistress: higher winter temperatures and chemical contamination.
Afficher plus [+] Moins [-]Impacts of chemical stress, season, and climate change on the flounder population of the highly anthropised Seine estuary (France) Texte intégral
2022
Laurent, Jennifer | Lavergne, Edouard | Couteau, Jérôme | Le Floch, Stéphane | Ouddane, Baghdad | Cachot, Jérôme | Davail, Blandine | Clérandeau, Christelle | Devin, Simon | Fisson, Cédric | Devaux, Alain | Amara, Rachid | Diop, Mamadou | Pichereau, Vianney | Laroche, Jean
The main objective of this study was to improve our knowledge on the responses of fish populations to multistress (diffuse pollution and warming waters) in estuaries. Adult flounders were caught in two estuaries in the Eastern English Channel: the heavily polluted Seine estuary vs the moderately contaminated Canche estuary. Fish samplings were conducted in January just before the reproduction period, and in July when gonads were at rest. The overall rise in coastal winter water temperatures detected over the Channel impairs the flounder’s phenology of reproduction in the two estuaries, inducing a delay of maturation process and probably also spawning. The higher liver histopathology index in Seine vs Canche could be the consequence of the fish exposition to a complex cocktail of contaminants in a strongly industrialized estuary. Higher levels of neurotoxicity, gill lipid peroxidation, and liver EROD activity were observed in Seine vs Canche. Furthermore, a possible impairment in mitochondrial metabolism was suggested in the Seine flounder population. We confirmed in this study the potential role of two membrane lipids (sphingomyelin and phosphatidylserine) in the resistance towards oxidative stress in Seine and Canche. Finally, we suggest that the Seine flounder population (and possibly the connected Eastern English Channel flounder populations over the French Coast) could be seriously impacted in the future by multistress: higher winter temperatures and chemical contamination.
Afficher plus [+] Moins [-]Imidacloprid-induced pathophysiological damage in the midgut of Locusta migratoria (Orthoptera: Acrididae) in the field Texte intégral
2022
El-Samad, Lamia | El-Gerbed, Mohamed | Hussein, Hanaa | Flaven-Pouchon, Justin | El Wakil, Abeer | Moussian, Bernard | Alexandria University [Alexandrie] | Damanhour University [Egypte] | Centro Interdisciplinario de Neurociencias de Valparaíso ; Universidad de Valparaiso = Valparaiso University | Centre des Sciences du Goût et de l'Alimentation [Dijon] (CSGA) ; Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Institut de pharmacologie moléculaire et cellulaire (IPMC) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UniCA) | Université Nice Sophia Antipolis (1965 - 2019) (UNS) | Institut Sophia Agrobiotech (ISA) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Côte d'Azur (UniCA) | German Research Foundation (DFG)DFG MO1714/9
Imidacloprid-induced pathophysiological damage in the midgut of Locusta migratoria (Orthoptera: Acrididae) in the field Texte intégral
2022
El-Samad, Lamia | El-Gerbed, Mohamed | Hussein, Hanaa | Flaven-Pouchon, Justin | El Wakil, Abeer | Moussian, Bernard | Alexandria University [Alexandrie] | Damanhour University [Egypte] | Centro Interdisciplinario de Neurociencias de Valparaíso ; Universidad de Valparaiso = Valparaiso University | Centre des Sciences du Goût et de l'Alimentation [Dijon] (CSGA) ; Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Institut de pharmacologie moléculaire et cellulaire (IPMC) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UniCA) | Université Nice Sophia Antipolis (1965 - 2019) (UNS) | Institut Sophia Agrobiotech (ISA) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Côte d'Azur (UniCA) | German Research Foundation (DFG)DFG MO1714/9
International audience | Neonicotinoids are modern insecticides widely used in agriculture worldwide. Their impact on target (nervous system) and non-target (midgut) tissues has been well studied in beneficial insects including honeybees under controlled conditions. However, their detailed effects on pest insects on the field are missing to date. Here, we have studied the effects of the neonicotinoid imidacloprid on the midgut of the pest insect Locusta migratoria caught in the field. We found that in the midgut of imidacloprid-exposed locusts the activity of enzymes involved in reactive oxygen metabolism was perturbed. By contrast, the activity of P450 enzymes that have been shown to be activated in a detoxification response and that were also reported to produce reactive oxygen species was elevated. Probably as a consequence, markers of oxidative stress including protein carbonylation and lipid peroxidation accumulated in midgut samples of these locusts. Histological analyses revealed that their midgut epithelium is disorganized and that the brush border of the epithelial cells is markedly reduced. Indeed, microvilli are significantly shorter, misshapen and possibly non-functional in imidacloprid-treated locusts. We hypothesize that imidacloprid induces oxidative stress in the locust midgut, thereby changing the shape of midgut epithelial cells and probably in turn compromising their physiological function. Presumably, these effects reduce the survival rate of imidacloprid-treated locusts and the damage they cause in the field.
Afficher plus [+] Moins [-]Imidacloprid-induced pathophysiological damage in the midgut of Locusta migratoria (Orthoptera: Acrididae) in the field Texte intégral
2022
El-Samad, Lamia M. | El-Gerbed, Mohamed S. | Hussein, Hanaa S. | Flaven-Pouchon, Justin | El Wakil, Abeer | Moussian, Bernard
Neonicotinoids are modern insecticides widely used in agriculture worldwide. Their impact on target (nervous system) and non-target (midgut) tissues has been well studied in beneficial insects including honeybees under controlled conditions. However, their detailed effects on pest insects on the field are missing to date. Here, we have studied the effects of the neonicotinoid imidacloprid on the midgut of the pest insect Locusta migratoria caught in the field. We found that in the midgut of imidacloprid-exposed locusts the activity of enzymes involved in reactive oxygen metabolism was perturbed. By contrast, the activity of P450 enzymes that have been shown to be activated in a detoxification response and that were also reported to produce reactive oxygen species was elevated. Probably as a consequence, markers of oxidative stress including protein carbonylation and lipid peroxidation accumulated in midgut samples of these locusts. Histological analyses revealed that their midgut epithelium is disorganized and that the brush border of the epithelial cells is markedly reduced. Indeed, microvilli are significantly shorter, misshapen and possibly non-functional in imidacloprid-treated locusts. We hypothesize that imidacloprid induces oxidative stress in the locust midgut, thereby changing the shape of midgut epithelial cells and probably in turn compromising their physiological function. Presumably, these effects reduce the survival rate of imidacloprid-treated locusts and the damage they cause in the field.
Afficher plus [+] Moins [-]Assessment of heavy metal pollution transfer and human exposure risks from the consumption of chicken grown in mining-surrounding areas Texte intégral
2022
Elkribi-Boukhris, Sameh | M’hamdi, Naceur | Boughattas, Iteb | Helaoui, Sondes | Coriou, Cecile | Bussiere, Sylvie | Sappin-Didier, Valérie | Banni, Mohamed | Higher Institute of Agronomy | National Agronomic Institute of Tunisia (INAT) ; Université de Carthage (Tunisie) = University of Carthage (UCAR) | Laboratory of Biochemistry and Environmental Toxicology ; Institut Supérieur Agronomique Chott-Mériem (ISA) | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Assessment of heavy metal pollution transfer and human exposure risks from the consumption of chicken grown in mining-surrounding areas Texte intégral
2022
Elkribi-Boukhris, Sameh | M’hamdi, Naceur | Boughattas, Iteb | Helaoui, Sondes | Coriou, Cecile | Bussiere, Sylvie | Sappin-Didier, Valérie | Banni, Mohamed | Higher Institute of Agronomy | National Agronomic Institute of Tunisia (INAT) ; Université de Carthage (Tunisie) = University of Carthage (UCAR) | Laboratory of Biochemistry and Environmental Toxicology ; Institut Supérieur Agronomique Chott-Mériem (ISA) | Interactions Sol Plante Atmosphère (UMR ISPA) ; Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
International audience | The purpose of this study was to assess heavy metal contamination in soil, plants, earthworms, and chicken in farmlands adjacent to an old mining site and to evaluate the potential exposure risks to humans through the consumption of chicken. For this purpose, soil, earthworms, plant, chickens, and eggs were sampled from 5 sites following a gradient of contamination. All samples were analyzed for heavy metals (Pb, Cd, Cu, and Zn). A food chain model was used in order to characterize heavy metal transfer between soil-plant-earthworm and chicken organs. Furthermore, target hazard quotient (THQ), estimated daily intake (EDI), and hazard index (HI) were employed to assess human health risks posed by heavy metal contamination. Despite the higher level of Pb, our data related to the calculation of EDI and THQ suggested that local consumers are more at risk of Cd contamination. The calculated HI showed values ranging from 2.58 to 4.74 for adults, and up to 12.34 for children, indicating a considerable risk to the health of local inhabitants, especially children. This study highlighted the crucial role of diets based on chickens grown in contaminated areas, on health risks especially for children.
Afficher plus [+] Moins [-]Assessment of heavy metal pollution transfer and human exposure risks from the consumption of chicken grown in mining-surrounding areas Texte intégral
2022
Elkribi-Boukhris, Sameh | M’hamdi, Naceur | Boughattas, Iteb | Helaoui, Sondes | Coriou, Cecile | Bussiere, Sylvie | Sappin-Didier, Valerie | Banni, Mohamed
The purpose of this study was to assess heavy metal contamination in soil, plants, earthworms, and chicken in farmlands adjacent to an old mining site and to evaluate the potential exposure risks to humans through the consumption of chicken. For this purpose, soil, earthworms, plant, chickens, and eggs were sampled from 5 sites following a gradient of contamination. All samples were analyzed for heavy metals (Pb, Cd, Cu, and Zn). A food chain model was used in order to characterize heavy metal transfer between soil-plant-earthworm and chicken organs. Furthermore, target hazard quotient (THQ), estimated daily intake (EDI), and hazard index (HI) were employed to assess human health risks posed by heavy metal contamination. Despite the higher level of Pb, our data related to the calculation of EDI and THQ suggested that local consumers are more at risk of Cd contamination. The calculated HI showed values ranging from 2.58 to 4.74 for adults, and up to 12.34 for children, indicating a considerable risk to the health of local inhabitants, especially children. This study highlighted the crucial role of diets based on chickens grown in contaminated areas, on health risks especially for children.
Afficher plus [+] Moins [-]Environmental microplastics disrupt swimming activity in acute exposure in Danio rerio larvae and reduce growth and reproduction success in chronic exposure in D. rerio and Oryzias melastigma Texte intégral
2022
Cormier, Bettie | Cachot, Jerome | Blanc, Melanie | Cabar, Mathieu | Clérandeau, Christelle | Dubocq, Florian | Le Bihanic, Florane | Morin, Bénédicte | Zapata, Sarah | Bégout, Marie-laure | Cousin, Xavier
Environmental microplastics disrupt swimming activity in acute exposure in Danio rerio larvae and reduce growth and reproduction success in chronic exposure in D. rerio and Oryzias melastigma Texte intégral
2022
Cormier, Bettie | Cachot, Jerome | Blanc, Melanie | Cabar, Mathieu | Clérandeau, Christelle | Dubocq, Florian | Le Bihanic, Florane | Morin, Bénédicte | Zapata, Sarah | Bégout, Marie-laure | Cousin, Xavier
Microplastics (MPs), widely present in aquatic ecosystems, can be ingested by numerous organisms, but their toxicity remains poorly understood. Toxicity of environmental MPs from 2 beaches located on the Guadeloupe archipelago, Marie Galante (MG) and Petit-Bourg (PB) located near the North Atlantic gyre, was evaluated. A first experiment consisted in exposing early life stages of zebrafish (Danio rerio) to MPs at 1 or 10 mg/L. The exposure of early life stages to particles in water induced no toxic effects except a decrease in larval swimming activity for both MPs exposures (MG or PB). Then, a second experiment was performed as a chronic feeding exposure over 4 months, using a freshwater fish species, zebrafish, and a marine fish species, marine medaka (Oryzias melastigma). Fish were fed with food supplemented with environmentally relevant concentrations (1% wet weight of MPs in food) of environmental MPs from both sites. Chronic feeding exposure led to growth alterations in both species exposed to either MG or PB MPs but were more pronounced in marine medaka. Ethoxyresorufin-O-deethylase (EROD) and acetylcholinesterase (AChE) activities were only altered for marine medaka. Reproductive outputs were modified following PB exposure with a 70 and 42% decrease for zebrafish and marine medaka, respectively. Offspring of both species (F1 generation) were reared to evaluate toxicity following parental exposure on unexposed larvae. For zebrafish offspring, it revealed premature mortality after parental MG exposure and parental PB exposure produced behavioural disruptions with hyperactivity of F1 unexposed larvae. This was not observed in marine medaka offspring. This study highlights the ecotoxicological consequences of short and long-term exposures to environmental microplastics relevant to coastal marine areas, which represent essential habitats for a wide range of aquatic organisms.
Afficher plus [+] Moins [-]Environmental microplastics disrupt swimming activity in acute exposure in Danio rerio larvae and reduce growth and reproduction success in chronic exposure in D. rerio and Oryzias melastigma Texte intégral
2022
Cormier, Bettie | Cachot, Jérôme | Blanc, Mélanie | Cabar, Mathieu | Clérandeau, Christelle | Dubocq, Florian | Le Bihanic, Florane | Morin, Bénédicte | Zapata, Sarah | Bégout, Marie-Laure | Cousin, Xavier
Microplastics (MPs), widely present in aquatic ecosystems, can be ingested by numerous organisms, but their toxicity remains poorly understood. Toxicity of environmental MPs from 2 beaches located on the Guadeloupe archipelago, Marie Galante (MG) and Petit-Bourg (PB) located near the North Atlantic gyre, was evaluated. A first experiment consisted in exposing early life stages of zebrafish (Danio rerio) to MPs at 1 or 10 mg/L. The exposure of early life stages to particles in water induced no toxic effects except a decrease in larval swimming activity for both MPs exposures (MG or PB). Then, a second experiment was performed as a chronic feeding exposure over 4 months, using a freshwater fish species, zebrafish, and a marine fish species, marine medaka (Oryzias melastigma). Fish were fed with food supplemented with environmentally relevant concentrations (1% wet weight of MPs in food) of environmental MPs from both sites. Chronic feeding exposure led to growth alterations in both species exposed to either MG or PB MPs but were more pronounced in marine medaka. Ethoxyresorufin-O-deethylase (EROD) and acetylcholinesterase (AChE) activities were only altered for marine medaka. Reproductive outputs were modified following PB exposure with a 70 and 42% decrease for zebrafish and marine medaka, respectively. Offspring of both species (F1 generation) were reared to evaluate toxicity following parental exposure on unexposed larvae. For zebrafish offspring, it revealed premature mortality after parental MG exposure and parental PB exposure produced behavioural disruptions with hyperactivity of F1 unexposed larvae. This was not observed in marine medaka offspring. This study highlights the ecotoxicological consequences of short and long-term exposures to environmental microplastics relevant to coastal marine areas, which represent essential habitats for a wide range of aquatic organisms.
Afficher plus [+] Moins [-]Environmental microplastics disrupt swimming activity in acute exposure in Danio rerio larvae and reduce growth and reproduction success in chronic exposure in D. rerio and Oryzias melastigma Texte intégral
2022
Cormier, Bettie | Cachot, Jérôme | Blanc, Mélanie | Cabar, Mathieu | Clérandeau, Christelle | Dubocq, Florian | Le Bihanic, Florane | Morin, Bénédicte | Zapata, Sarah | Bégout, Marie-Laure | Cousin, Xavier | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Örebro University | Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | MARine Biodiversity Exploitation and Conservation - Station Ifremer Palavas (UMR MARBEC PALAVAS) ; MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | This work was developed under the EPHEMARE project (Ecotoxicological effects of microplastics in marine ecosystems), supported by national funding agencies within the framework of JPI Oceans (FCT JPIOCEANS/0005/2015; FORMAS, 2015-01865; ANR-15-JOCE-0002-01). Bettie Cormier was directly supported by an IdEx grant from the University of Bordeaux. | ANR-15-JOCE-0002,EPHEMARE,Ecotoxicological effects of microplastics in marine ecosystems(2015)
International audience | Microplastics (MPs), widely present in aquatic ecosystems, can be ingested by numerous organisms, but their toxicity remains poorly understood. Toxicity of environmental MPs from 2 beaches located on the Guadeloupe archipelago, Marie Galante (MG) and Petit-Bourg (PB) located near the North Atlantic gyre, was evaluated. A first experiment consisted in exposing early life stages of zebrafish (Danio rerio) to MPs at 1 or 10 mg/L. The exposure of early life stages to particles in water induced no toxic effects except a decrease in larval swimming activity for both MPs exposures (MG or PB). Then, a second experiment was performed as a chronic feeding exposure over 4 months, using a freshwater fish species, zebrafish, and a marine fish species, marine medaka (Oryzias melastigma). Fish were fed with food supplemented with environmentally relevant concentrations (1% wet weight of MPs in food) of environmental MPs from both sites. Chronic feeding exposure led to growth alterations in both species exposed to either MG or PB MPs but were more pronounced in marine medaka. Ethoxyresorufin-O-deethylase (EROD) and acetylcholinesterase (AChE) activities were only altered for marine medaka. Reproductive outputs were modified following PB exposure with a 70 and 42% decrease for zebrafish and marine medaka, respectively. Offspring of both species (F1 generation) were reared to evaluate toxicity following parental exposure on unexposed larvae. For zebrafish offspring, it revealed premature mortality after parental MG exposure and parental PB exposure produced behavioural disruptions with hyperactivity of F1 unexposed larvae. This was not observed in marine medaka offspring. This study highlights the ecotoxicological consequences of short and long-term exposures to environmental microplastics relevant to coastal marine areas, which represent essential habitats for a wide range of aquatic organisms.
Afficher plus [+] Moins [-]Time-series incubations in a coastal environment illuminates the importance of early colonizers and the complexity of bacterial biofilm dynamics on marine plastics Texte intégral
2022
Lemonnier, C. | Chalopin, Morgane | Huvet, Arnaud | Le Roux, Frederique | Labreuche, Yannick | Petton, Bruno | Maignien, Lois | Paul-pont, Ika | Reveillaud, J.
Time-series incubations in a coastal environment illuminates the importance of early colonizers and the complexity of bacterial biofilm dynamics on marine plastics Texte intégral
2022
Lemonnier, C. | Chalopin, Morgane | Huvet, Arnaud | Le Roux, Frederique | Labreuche, Yannick | Petton, Bruno | Maignien, Lois | Paul-pont, Ika | Reveillaud, J.
The problematic of microplastics pollution in the marine environment is tightly linked to their colonization by a wide diversity of microorganisms, the so-called plastisphere. The composition of the plastisphere relies on a complex combination of multiple factors including the surrounding environment, the time of incubation along with the polymer type, making it difficult to understand how the biofilm evolves during the microplastic lifetime over the oceans. To better define bacterial community assembly processes on plastics, we performed a 5 months spatio-temporal survey of the plastisphere in an oyster farming area in the Bay of Brest (France). We deployed three types of plastic pellets in two positions in the foreshore and in the water column. Plastic-associated biofilm composition in all these conditions was monitored using 16 S rRNA metabarcoding and compared to free-living and attached bacterial members of seawater. We observed that bacterial families associated to plastic pellets were significantly distinct from the ones found in seawater, with a significant prevalence of filamentous Cyanobacteria on plastics. No convergence towards a unique plastisphere was detected between polymers exposed in the intertidal and subtidal area, emphasizing the central role of the surrounding environment on constantly shaping the plastisphere community diversity. However, we could define a bulk of early-colonizers of marine biofilms such as Alteromonas, Pseudoalteromonas or Vibrio. These early-colonizers could reach high abundances in floating microplastics collected in field-sampling studies, suggesting the plastic-associated biofilms could remain at early development stages across large oceanic scales. Our study raises the hypothesis that most members of the plastisphere, including putative pathogens, could result of opportunistic colonization processes and unlikely long-term transport.
Afficher plus [+] Moins [-]Time-series incubations in a coastal environment illuminates the importance of early colonizers and the complexity of bacterial biofilm dynamics on marine plastics Texte intégral
2022
Lemonnier, C. | Chalopin, M. | Huvet, A. | Le Roux, F. | Labreuche, Y. | Petton, B. | Maignien, L. | Paul-Pont, I. | Reveillaud, J.
The problematic of microplastics pollution in the marine environment is tightly linked to their colonization by a wide diversity of microorganisms, the so-called plastisphere. The composition of the plastisphere relies on a complex combination of multiple factors including the surrounding environment, the time of incubation along with the polymer type, making it difficult to understand how the biofilm evolves during the microplastic lifetime over the oceans. To better define bacterial community assembly processes on plastics, we performed a 5 months spatio-temporal survey of the plastisphere in an oyster farming area in the Bay of Brest (France). We deployed three types of plastic pellets in two positions in the foreshore and in the water column. Plastic-associated biofilm composition in all these conditions was monitored using 16 S rRNA metabarcoding and compared to free-living and attached bacterial members of seawater. We observed that bacterial families associated to plastic pellets were significantly distinct from the ones found in seawater, with a significant prevalence of filamentous Cyanobacteria on plastics. No convergence towards a unique plastisphere was detected between polymers exposed in the intertidal and subtidal area, emphasizing the central role of the surrounding environment on constantly shaping the plastisphere community diversity. However, we could define a bulk of early-colonizers of marine biofilms such as Alteromonas, Pseudoalteromonas or Vibrio. These early-colonizers could reach high abundances in floating microplastics collected in field-sampling studies, suggesting the plastic-associated biofilms could remain at early development stages across large oceanic scales. Our study raises the hypothesis that most members of the plastisphere, including putative pathogens, could result of opportunistic colonization processes and unlikely long-term transport.
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