This study evaluates the transcriptional profiles of genes related to physiological responses in digestive glands (DG) of Mytilus galloprovincialis under the influence of seasonal changes of environmental variables, gender bias, and gonadal development. Composition of the DG microbiome was also explored. Mussels were collected across 7 months encompassing 3 seasons from a farm in the Northwestern Adriatic Sea. All gene products showed complex transcriptional patterns across seasons. Salinity, surface oxygen and transparency significantly correlate with transcriptional profiles of males, whereas in females temperature and gonadal maturation mostly explained the observed transcriptional changes. Seasonal variations and gender-specific differences were observed in DG microbiome composition, with variations resembling metabolic accommodations likely facing season progression and reproductive cycle. Results provide baseline information to improve actual monitoring strategies of mussel farming conditions and forecast potential detrimental impacts of climatological/environmental changes in the study area.

Concentrations, sources and interactions between black carbon (BC) and polycyclic aromatic hydrocarbons (PAHs) were investigated in 42 sediment samples collected from riverine, coastal and shelf areas in Peninsular Malaysia. The concentrations of BC measured by benzene polycarboxylic acid (BPCA) method and PAHs showed broad spatial variations between the relatively pristine environment of the East coast and developed environment of the West and South coast ranging from 0.02 to 0.36% dw and 57.7 ng g⁻¹ dw to 19,300 ng g⁻¹ dw, respectively. Among diagnostic ratios of PAHs, the ratios of Ant/(Ant+Phe) and LMW/HMW drew the clearest distinctions between the East coast versus the West and South coast sediments indicating the predominance of petrogenic sources in the former versus pyrogenic sources in the latter. PAHs significantly correlated with BC and total organic carbon (TOC) in the sediments (p < 0.05) having similar correlation coefficients. BC accounted for 6.06 to 30.6% of TOC in sediments.

In recent years, urban and industrial development initiatives at Puducherry and Diu such as tourism, shipping, and fisheries have led to sediment contamination by trace metals, and contributed to this investigation that extended from 2016 to 2017. Strong factor loadings of Cd (0.94), Ni (0.84), Al (0.84), Cr (0.83), Co (0.82), and Fe (0.78) illustrated the variability at Puducherry, whereas Cr (0.88), Cd (0.86), Ni (0.83), Co (0.77), Cu (0.77), and Fe (0.77) showed variability at Diu. The mean rank order distribution of the top three metals in sediment was Fe > Al > Mn, which exhibited higher variability. The highest contamination factor was observed for Cd at Diu, whereas the lowest was observed at Puducherry for Al. Similarly, the risk index also exhibited considerable risk which could be attributed to Cd contamination in the sediment at Diu compared with that at Puducherry. The results obtained are essential to establish a reference for better comparison and management of the tropical environments.

There is a rich literature on coral reef sediments. However, this knowledge is spread among research fields, and the extent to which major sediment reservoirs and reservoir connecting processes have been quantified is unclear. We examined the literature to quantify where and how sediments have been measured on coral reefs and, thereby, identified critical knowledge gaps. In most studies, sediments in one reservoir or one sedimentary process were quantified. The measurement of water column sediments (55% of reservoir measurements) and sediment trapping rates (42% of process measurements) were over-represented. In contrast, sediments on reef substrata, and the transition of sediments from the water column to the benthos, were rarely quantified. Furthermore, only ~20% of sediment measurements were accompanied by the quantification of hydrodynamic drivers. Multidisciplinary collaborative approaches offer great promise for advancing our understanding of the connections between sediment reservoirs, and the sedimentary and hydrodynamic processes that mediate these connections.

A Lagrangian model which describes radionuclide transport in the northern Indian Ocean is described. Water circulation is obtained from HYCOM ocean model for year 2017. The model includes advection by currents, turbulent mixing and radionuclide interactions between water and sediments, described in a dynamic way using kinetic transfer coefficients. Hypothetical releases from five coastal nuclear power plants operating in the northern Indian Ocean were simulated. Releases were supposed to start both during the winter and summer monsoons, to study reversing circulation effects. Age distributions of releases were calculated, which adds information about circulation and radionuclide pathways. It was found that, for some of the NPPs, radionuclide distributions resulting from releases starting in both seasons were not as different as could be expected from the opposed circulation schemes during each monsoon. Effective ¹³⁷Cs half-lives in the ocean surface were calculated and results were two orders of magnitude below previous estimations.

Unlike records of plastic ingestion and entanglement in seabirds which date back to the 1960s, the literature regarding debris in bird nests is comparatively limited. It is important to identify standardised methods early so that data are collected in a consistent manner, ensuring that future studies can be comparable. Here, we outline a method that can be applied to photographs for estimating the proportion of visible debris at the surface of a nest. This method uses ImageJ software to superimpose a grid onto a photograph of a nest/s. The number of cells with and without debris are then counted. Our proposed method is repeatable, straightforward, and accessible. We optimised the method to estimate the level of visible debris in Northern Gannet (Morus bassanus) nests, however, with some modification (i.e., adjustment of grid cell size), it could be applied to other seabird species, and terrestrial birds, that incorporate debris within nests.

Perfluorinated alkyl substances (PFASs) were determined in marine plastic litter (MPL) on six beaches of central Chile. MPL was characterized physically and chemically, showing an abundance of macroplastic (size >2.5 cm). The polypropylene (PP) (47%) was the predominant polymer found. The Desembocadura beach, located at the mouth of the Biobio River, recorded the highest abundance of MPL (3.7 items m⁻²). PFAS detected (n = 15/21) ranged from 279 to 1211 pg g⁻¹ and accounted for MeFOSE (46%) > PFHxS (14%) > PFPA (11%) > PFBS (6%) > PFOA (4%) and > PFOS (4%). Long-chain PFAS were prevalent, which can be metabolically degraded into PFOS (new POPs). This study i) highlights the need to further investigate the occurrence of chemicals in the MPL to reduce their impact on the environment; and ii) points out the need to improve future coastal management strategies for the elimination of solid waste along the coast of the country.

Chlorophyll a fluorescence is increasingly being used as a rapid, non-invasive, sensitive and convenient indicator of photosynthetic performance in marine autotrophs. This review presents the methodology, applications and limitations of chlorophyll fluorescence in marine studies. The various chlorophyll fluorescence tools such as Pulse-Amplitude-Modulated (PAM) and Fast Repetition Rate (FRR) fluorometry used in marine scientific studies are discussed. Various commonly employed chlorophyll fluorescence parameters are elaborated. The application of chlorophyll fluorescence in measuring natural variations, stress, stress tolerance and acclimation/adaptation to changing environment in primary producers such as microalgae, macroalgae, seagrasses and mangroves, and marine symbiotic invertebrates, namely symbiotic sponges, hard corals and sea anemones, kleptoplastic sea slugs and giant clams is critically assessed. Stressors include environmental, biological, physical and chemical ones. The strengths, limitations and future perspectives of the use of chlorophyll fluorescence technique as an assessment tool in symbiotic marine organisms and seaplants are discussed.

In this study, selected PCB congeners (IUPAC numbers 28, 52, 101, 138, 153, and 180) were quantified in 34 stations of Chabahr bay and around it in the Makran region of Iran. The sum of total PCB concentrations varied from below the detection limit to 485 ng kg⁻¹ dry weight of sediment. Based on the Canadian Sediment Quality Guidelines, the effect of detected PCBs was negligible for aquatic organisms. According to the dominance of PCB 28 and 52 with average range of 62 to 100% of total PCBs, maritime transportation and atmospheric deposition appear to be the important source of PCBs in this region. Further, the presence of components of commercial products such as ClophenA50 appears to be one of the probable sources.

Humans have always benefited from marine ecosystems and the use of their services has increased over time. The principal challenge of managing ecosystem services is that they are not independent of each other. Attempts to optimize a single service have often led to the reductions or losses of other services; in other words, they are “traded-offs”. Based on the purpose of assessing the impacts of marine aquaculture development in the Southern Caspian Sea, 3 management scenarios were utilized to model 3 categories, including marine aquaculture, Water Quality (WQ) and Habitat Risk Assessment (HRA) through marine Integrated Valuation of Ecosystem Services and Tradeoffs (InVEST). Marine aquaculture model was first considered for Oncorhynchus mykiss that the results were as follows: in the baseline scenario with 9 farms, the amounts of the total weight of fish produced and Net Present Value (NPV) measured during 1 year equaled 1970 tons and 2,247,000 dollars; in the conservation scenario with 4 farms, their amounts were 800 tons and 1 million dollars; in the expansion scenario with an increased number of farms (20 farms), their amounts were estimated to be 4000 tons and 5 million dollars, respectively. The results of the marine aquaculture model were utilized as the inputs both to WQ (amount of BOD released from each farm) and HRA (habitats of four species of fish (Rutilus frisii kutum, Acipenser stellatus, Acipenser persicus, and Huso huso) models. The results revealed 41%, 16%, and 60% of WQ reductions and 35%, 20%, and 45% of HRA changes in the baseline, conservation, and expansion scenarios, respectively. Considering the current production of 9 existing farms (1970 tons per year) and the impact of this production on water quality (41%) and habitat risk (35%), it is recommended to reduce this production volume and doing aquaculture development in the Southern Caspian Sea without considering and managing negative consequences can have dangerous consequences for this sensitive ecosystem.