Underwater noise from shipping is a growing presence throughout the world’s oceans, and may be subjecting marine fauna to chronic noise exposure with potentially severe long-term consequences. The coincidence of dense shipping activity and sensitive marine ecosystems in coastal environments is of particular concern, and noise assessment methodologies which describe the high temporal variability of sound exposure in these areas are needed. We present a method of characterising sound exposure from shipping using continuous passive acoustic monitoring combined with Automatic Identification System (AIS) shipping data. The method is applied to data recorded in Falmouth Bay, UK. Absolute and relative levels of intermittent ship noise contributions to the 24-h sound exposure level are determined using an adaptive threshold, and the spatial distribution of potential ship sources is then analysed using AIS data. This technique can be used to prioritise shipping noise mitigation strategies in coastal marine environments.

Uncertainty analyses allow the identification and quantification of the factors that contribute to the potential misclassification of the ecological status of water bodies, helping to improve the sampling design used in monitoring. Here we used a Posidonia oceanica multivariate index (POMI) bio-monitoring dataset covering a total of 81 sites distributed throughout 28 water bodies from the coast of Catalonia, Balearic Islands and Croatia to determine the levels of uncertainty associated with each region and how they change according to the quality status of water bodies. Overall, variability among sites (meadows) within water bodies was the factor that generated the greatest risk of misclassification among the three regions, within which the Balearic Islands had the lowest uncertainty, followed by Croatia and Catalonia. When water bodies classified in good/high quality were separated from those in moderate/poor status classes, we found that the latter displayed higher levels of uncertainty than the former.

In this study, some toxic metal such as Pb, Cd and Hg analyzes have been done in the nearshore surface sediments. Sediment samples have been collected from five parts from the European and Anotolian Shores of the Bosphorus during 2003–2004. Total Pb, Cd and Hg contents vary between <0.01μgg⁻¹ and 238μgg⁻¹; <0.01μgg⁻¹ and 0.92μgg⁻¹; 0.001μgg⁻¹ and 0.45μgg⁻¹, respectively. Contamination Factor (CF) values of Pb and Cd range between 1 and 3 whilst CF values of Hg are lower than 1 in all the stations. It means that there are no Hg metal enrichment by natural or anthropogenic inputs contrary to moderately contamination for Pb and Cd metals throughout the Bosphorus sediments.

Total metal concentrations (Cr, Ni, Cu, Zn, and Pb), acid volatile sulfide and simultaneously extracted metals (AVS–SEM), and heavy metal fractionation were used to assess the heavy metals contamination status and ecological risk in the sediments of the Pearl River Estuary (PRE) and adjacent shelf. Elevated concentrations at estuarine sites and lower concentrations at adjacent shelf sites are observed, especially for Cu and Zn. Within the PRE, the concentration of heavy metals in the western shore was mostly higher than that in the middle shore. The metals from anthropogenic sources mainly occur in the labile fraction and may be taken up by organisms as the environmental parameters change. A combination of total metal concentrations, metal contamination index and sequential extraction analysis is necessary to get the comprehensive information on the baseline, anthropogenic discharge and bioavailability of heavy metals.

In 2007, the Rhodophyceae Alsidium corallinum C. Ag., a marine taxon, bloomed in the eutrophic lagoon of Orbetello (Tuscany, Italy) for the first time, becoming the dominant species in spring and summer. In November, its biomass collapsed. The hypothesis examined in this study is that the bloom expressed a relatively low eutrophic level of the ecosystem after intense disposal of accumulated sedimentary organic matter (OM) by dystrophic processes in the two years preceding the bloom. To verify the hypothesis, we compared water physical–chemical variables, sediment redox (Eh) and OM, and standing crops of macroalgae and seagrass from the database of routine monitoring between 2005 and 2008. We also used dissolved nutrient data obtained in 2007 and 2008, as well as data on chlorophyll and total suspended matter in the water column during the microalgal bloom of 2007, and C, N and P content in thalli of the Chlorophycea Chaetomorpha linum and the Rhodophyceae Gracilariopsis longissima and A. corallinum obtained in 2007. In 2007, unusually low values of dissolved inorganic nitrogen (DIN) were recorded. Combined with stable values of soluble reactive phosphorus (SRPs), low DIN led to a reduction of about one order of magnitude in the DIN:SRP atomic ratio with respect to the past and to 2008. G. longissima accumulated C, N and P more than the other species and A. corallinum proved to be less demanding. Sediment OM was lower in the autumn of years characterized by dystrophy, confirming that summer dystrophic events coincided with maximum energy dissipation in this ecosystem. However, as soon as OM and DIN values increased (2008), the vegetation shifted towards blooms of G. longissima and C. linum, while A. corallinum almost disappeared. The results sustain the hypothesis that the bloom of A. corallinum was due to a decline in DIN that limited G. longissima, and to intense turbidity of the water caused by microphytes that developed after the dystrophic event of summer 2006. The latter probably limited the development of C. linum, which could only develop at the edges of the lagoon.

Ballast water has been identified as one of the key pathways for the movement of species between different ecosystems. The purpose of this study is to evaluate the biological efficacy and the potential toxicological impact of a proposed ballast water treatment using hydroxyl radicals as the main active substances. Living biomass of organisms kept in treated water for 2days met the requirement stated in the International Maritime Organization (IMO) Ballast Water Convention (Regulation D-2), and no re-growth was observed over a period of 5days. Aquatic toxicity tests of three trophic levels for the treated ballast water were performed. The results indicated that the toxicological risk of the discharge water to the receiving environment was not significant.

Forty-two surface sediment samples collected from the southern coastal East China Sea (ECS) were analyzed for organochlorine pesticides (OCPs). The results showed high concentrations of DDTs and parent DDT fractions in the nearshore area, suggesting that there is still a fresh input of these species from non-point sources, probably due to the recent usage of relevant products. However, for HCHs, the high concentrations with elevated β-HCH fraction were focused at the local major river estuaries, indicating that soils-released HCH input was mainly from the major river runoffs. The distribution and composition of OCPs in the coastal ECS could be more prominently controlled by the direct regional inputs rather than the general natural sorption process on particulate organic carbon. DDTs and chlordane are more important for their potential ecotoxicological risk on neighboring benthic community in the nearshore region and the local major river estuaries.

In this study we compared reproductive characteristics and steroid hormone levels in the non-indigenous scleractinian coral, Oculina patagonica, inhabiting contaminated vs. uncontaminated reference sites along the Israeli Mediterranean coast. Our results indicate significantly higher steroid levels in both seawater and coral tissue samples from contaminated sites as compared to reference sites, suggesting that corals tend to accumulate steroids from the surrounding waters. Despite their higher steroid levels, corals from the contaminated sites showed reproductive potential comparable to those of the reference sites. Interestingly, a clear distinction could be seen between corals exposed to pollution for long vs. short durations, with the latter showing a failure to complete gametogenesis. This suggests that reproduction in O. patagonica is susceptible to acute rather than chronic stress. The involvement of adjustment/adaptation processes may explain this species tolerance, and may reflect the ability of O. patagonica to successfully invade new areas in the Mediterranean Sea.

Responses of bioindicator candidates for water quality were quantified in two studies on inshore coral reefs of the Great Barrier Reef (GBR). In Study 1, 33 of the 38 investigated candidate indicators (including coral physiology, benthos composition, coral recruitment, macrobioeroder densities and FORAM index) showed significant relationships with a composite index of 13 water quality variables. These relationships were confirmed in Study 2 along four other water quality gradients (turbidity and chlorophyll). Changes in water quality led to multi-faceted shifts from phototrophic to heterotrophic benthic communities, and from diverse coral dominated communities to low-diversity communities dominated by macroalgae. Turbidity was the best predictor of biota; hence turbidity measurements remain essential to directly monitor water quality on the GBR, potentially complemented by our final calibrated 12 bioindicators. In combination, this bioindicator system may be used to assess changes in water quality, especially where direct water quality data are unavailable.

Riverine freshwater plumes are the major transport mechanism for nutrients, sediments and pollutants into the Great Barrier Reef (GBR) lagoon and connect the land with the receiving coastal and marine waters. Knowledge of the variability of the freshwater extent into the GBR lagoon is relevant for marine park management to develop strategies for improving ecosystem health and risk assessments. In this study, freshwater extent has been estimated for the entire GBR lagoon area from daily satellite observations of the Moderate Resolution Imaging Spectroradiometer (MODIS) between 2002 and 2010. To enable a reliable mapping of freshwater plumes we applied a physics-based coastal ocean colour algorithm, that simultaneously retrieves chlorophyll-a, non-algal particulate matter and coloured dissolved organic matter (CDOM), from which we used CDOM as a surrogate for salinity (S) for mapping the freshwater extent.