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Enterococcus species diversity and molecular characterization of biomarker genes in Enterococcus faecalis in Port Blair Bay, Andaman and Nicobar Islands, India
2015
Meena, Balakrishnan | Anburajan, Lawrance | Sathish, Thadikamala | Raghavan, Rangamaran Vijaya | Jha, Dilip Kumar | Venkateshwaran, Pitchiah | Das, Apurba Kumar | Dheenan, Palaiya Sukumaran | Vinithkumar, Nambali Valsalan | Dharani, Gopal | Kirubagaran, Ramalingam
This study was performed to evaluate the abundance and diversity of Enterococcus sp. and the distribution of biomarker genes in Enterococcus faecalis in Port Blair Bay, Andaman and Nicobar Islands. The Enterococcus sp. densities at the seven sampling stations were highly influenced by tidal fluctuations and season. The distributions and diversities of species varied in the inner and outer regions of Port Blair Bay. Among the 1816 total isolates, the occurrence of fecal Enterococcus was high (1.78×104CFU/100mL) in Phoenix Bay. Moreover, 67.76% of the isolates were identified as Enterococcus, and the most frequently identified species were E. hirae, E. avium and E. faecalis. Assessments of antibiotic resistance and biomarker genes revealed the maximum occurrence in the Aberdeen Bay isolates. The most prevalent biomarker genes observed in the E. faecalis isolates were gelE and asa1, whereas cyl was not found among the isolates. In silico sequence analysis of biomarker genes of E. faecalis also revealed that they are evolutionarily well conserved with those of earlier reports. Further, multivariate analysis distinguished the JB, PB and OS stations from the other stations according to distinctive microbial densities and compositions. In addition, the Shannon-Wiener diversity indices and box-whisker plots further facilitated and supported the multivariate results.
Afficher plus [+] Moins [-]Evaluation of MARS for the spatial distribution modeling of carbon monoxide in an urban area
2015
Shahraiyni, Hamid Taheri | Shahsavani, Davood | Sargazi, Saeed | Habibi–Nokhandan, Majid
Spatial distribution modeling of CO in Tehran can lead to better air pollution management and control, and it is also suitable for exposure assessment and epidemiological studies. In this study MARS (Multi–variate Adaptive Regression Splines) is compared with typical interpolation techniques for spatial distribution modeling of hourly and daily CO concentrations in Tehran, Iran. The measured CO data in 2008 by 16 monitoring stations were used in this study. The Generalized Cross Validation (GCV) and Cross Validation techniques were utilized for the parameter optimization in the MARS and other techniques, respectively. Then the optimized techniques were compared based on the mean absolute of percentage error (MAPE). Although the Cokriging technique presented less MAPE than the Inverse Distance Weighting, Thin Plate Smooth Splines and Kriging techniques, MARS exhibited the least MAPE. In addition, the MARS modeling procedure is easy. Therefore, MARS has merit to be introduced as an appropriate method for spatial distribution modeling. The number of air pollution monitoring stations is very low (16 stations for 22 zones) and the distribution of stations is not suitable for spatial estimation, hence the level of errors was relatively high (more than 60%). Consequently, hourly and daily mapping of CO provides a limited picture of spatial patterns of CO in Tehran, but it is suitable for estimation of relative CO levels in different zones of Tehran. Hence, the map of mean annual CO concentration was generated by averaging daily CO distributions in 2008. It showed that the most polluted regions in Tehran are the central, eastern and southeastern parts, and mean annual CO concentration in these parts (zones 6, 12, 13,14 and 15) is between 4.2 and 4.6 ppm.
Afficher plus [+] Moins [-]Hydrophobic poly(alkoxysilane) organogels as sorbent material for oil spill cleanup
2015
Ozan Aydin, Gulsah | Bulbul Sonmez, Hayal
In this study, reusable poly(alkoxysilane) organogels with high absorption capacities were synthesized by the condensation of a cyclo aliphatic glycol (UNOXOL™) and altering the chain length of the alkyltriethoxysilanes. The structural and thermal properties of cross-linked poly(alkoxysilane) polymers were determined by FTIR, solid-state 13C and 29Si CPMAS NMR and TGA. The oil absorbency of poly(alkoxysilane)s was determined through oil absorption tests, absorption and desorption kinetics. Results showed that the highest oil absorbency capacities were found to be 295% for hexane, 389% for euro diesel, 428% for crude oil, 652% for gasoline, 792% for benzene, 792% for toluene, 868% for tetrahydrofuran, and 1060% for dichloromethane for the poly(alkoxysilane) gels based on UNOXOL™ and dodecyltriethoxysilane. Owing to their hydrophobic structure, the poly(alkoxysilane) organogels can selectively absorb crude oil from water. The reusability of the absorbents was quantitatively investigated, demonstrating that absorbents can be used effectively at least nine times.
Afficher plus [+] Moins [-]Determination of typical lipophilic marine toxins in marine sediments from three coastal bays of China using liquid chromatography–tandem mass spectrometry after accelerated solvent extraction
2015
Wang, Yanlong | Chen, Junhui | Li, Zhaoyong | Wang, Shuai | Shi, Qian | Cao, Wei | Zheng, Xiaoling | Sun, Chengjun | Wang, Xiaoru | Zheng, Li
A method based on sample preparation by accelerated solvent extraction and analysis by liquid chromatography–tandem mass spectrometry was validated and used for determination of seven typical lipophilic marine toxins (LMTs) in marine sediment samples collected from three typical coastal bays in China. Satisfactory specificity, reproducibility (RSDs≤14.76%), stability (RSDs≤17.37%), recovery (78.0%–109.0%), and detection limit (3.440pg/g–61.85pg/g) of the developed method were achieved. The results obtained from the analysis of samples from Hangzhou Bay revealed okadaic acid as the predominant LMT with concentrations ranging from 186.0 to 280.7pg/g. Pecenotoxin-2 was quantified in sediment samples from Laizhou Bay at the concentrations from 256.4 to 944.9pg/g. These results suggested that the proposed method was reliable for determining the typical LMTs in marine sediments and that the sediments obtained from Hangzhou Bay, Laizhou Bay and Jiaozhou Bay were all contaminated by certain amounts of LMTs.
Afficher plus [+] Moins [-]Spatial and vertical distributions of heavy metals and their potential toxicity levels in various beach sediments from high-background-radiation area, Kerala, India
2015
Suresh, G. | Ramasamy, V. | Sundarrajan, M. | Paramasivam, K.
The spatial and vertical distribution of heavy metals and the sediment characteristics of beaches in Kerala, India (the upper surface sediments and the first, second and third one-foot-thick strata) were assessed in this study. The concentrations of most of the studied metals were highest at sampling site S1 (Cochin). The measured concentrations were compared with background and toxicological reference values. The results show that definite adverse biological effects are possible at most of the sampling sites due to the high Pb levels. Three different indexes were calculated to investigate the potential toxicity level. Most of the studied metals and all calculated indexes were highest in the third foot of sediment. Multivariate statistical analyses were performed and suggested that particular heavy metals, e.g., Pb, Cd, Cr and Ni, may represent contamination from a common source. The Cd and Pb concentrations and all the calculated index values show a relationship with the content of organic matter. The results of the present study suggest the recommendation that a systematic analysis is needed to monitor heavy metal levels in the studied area.
Afficher plus [+] Moins [-]Three decadal inputs of total organic carbon from four major coastal river basins to the summer hypoxic zone of the Northern Gulf of Mexico
2015
He, Songjie | Xu, YJun
This study investigated long-term (1980–2009) yields and variability of total organic carbon (TOC) from four major coastal rivers in Louisiana entering the Northern Gulf of Mexico where a large-area summer hypoxic zone has been occurring since the middle 1980s. Two of these rivers drain agriculture-intensive (>40%) watersheds, while the other two rivers drain forest-pasture dominated (>50%) watersheds. The study found that these rivers discharged a total of 13.0×104t TOC annually, fluctuating from 5.9×104 to 22.8×104t. Seasonally, the rivers showed high TOC yield during the winter and early spring months, corresponding to the seasonal trend of river discharge. While river hydrology controlled TOC yields, land use has played an important role in fluxes, seasonal variations, and characteristics of TOC. The findings fill in a critical information gap of quantity and quality of organic carbon transport from coastal watersheds to one of the world’s largest summer hypoxic zones.
Afficher plus [+] Moins [-]Loss of native rocky reef biodiversity in Australian metropolitan embayments
2015
Stuart-Smith, Rick D. | Edgar, Graham J. | Stuart-Smith, Jemina F. | Barrett, Neville S. | Fowles, Amelia E. | Hill, Nicole A. | Cooper, Antonia T. | Myers, Andrew P. | Oh, Elizabeth S. | Pocklington, Jacqui B. | Thomson, Russell J.
Urbanisation of the coastal zone represents a key threat to marine biodiversity, including rocky reef communities which often possess disproportionate ecological, recreational and commercial importance. The nature and magnitude of local urban impacts on reef biodiversity near three Australian capital cities were quantified using visual census methods. The most impacted reefs in urbanised embayments were consistently characterised by smaller, faster growing species, reduced fish biomass and richness, and reduced mobile invertebrate abundance and richness. Reef faunal distribution varied significantly with heavy metals, local population density, and proximity to city ports, while native fish and invertebrate communities were most depauperate in locations where invasive species were abundant. Our study adds impetus for improved urban planning and pollution management practises, while also highlighting the potential for skilled volunteers to improve the tracking of changes in marine biodiversity values and the effectiveness of management intervention.
Afficher plus [+] Moins [-]Sand patties provide evidence for the presence of Deepwater Horizon oil on the beaches of the West Florida Shelf
2015
McDaniel, L.D. | Basso, J. | Pulster, E. | Paul, J.H.
The ecological consequences of the Deepwater Horizon (DWH) oil spill are both long-term and pervasive. The distribution of toxicity and mutagenicity in the Gulf of Mexico suggests oil from the DWH spill could have contaminated the West Florida Shelf (WFS). We utilized polycyclic aromatic hydrocarbon (PAH) analysis to determine presence and potential origin of oil contaminants in beach sand patty samples. PAH profiles from WFS beaches were statistically significantly similar to DWH contaminated samples from the Northeast Gulf of Mexico (Gulf Shores, AL; Ft. Pickens, FL). Dioctyl sodium sulfosuccinate (DOSS), a major component of Corexit 9500 dispersant was also detected in the sediments. DOSS concentrations ranged from 1.6 to 5.5ngg−1 dry weight. Additionally, two samples from DWH oil contaminated beaches were acutely toxic and one WFS beach sediment sample was mutagenic. These observations provide support for the theory that DWH oil made its way onto beaches of the WFS.
Afficher plus [+] Moins [-]Human health risk assessment of pesticide residues in snappers (Lutjanus) fish from the Navachiste Lagoon complex, Mexico
2015
Granados-Galván, Ingrid Alejandra | Rodríguez-Meza, Durga Guadalupe | Luna-González, Antonio | González-Ocampo, Héctor Abelardo
Organochlorine pesticides (OCPs) residues were determined in fillets of Lutjanus colorado, L. argentiventris, and L. novemfasciatus. Fillet samples were collected bimonthly from February 2012 to February 2013. OCPs average concentrations do not differ significantly according to size, weight, or season, nor do they relate with the physico-chemical parameters of the sea water. The highest concentration and most frequently encountered OCPs were endosulfan sulfate, δ-HCH, and heptachlor epoxide, which indicates their use in the recent past and confirms their persistence. Average concentrations of ∑HCHs, ∑chlordane, and ∑heptachlor in samples were above cancer MRLs according to data from monthly consumed portions. HCHs and heptachlor are listed in Appendix III of the Rotterdam Convention of chemicals placed on a prior informed consent procedure for import and export purposes; they are considered illegal in Mexico. The OCPs concentrations above cancer MRLs in Lutjanus spp. turn its frequent consumption into a human health risk.
Afficher plus [+] Moins [-]Spatial distribution and transport patterns of NO2 in the Tijuana – San Diego area
2015
Rivera, Claudia | Stremme, Wolfgang | Barrera, Hugo | Friedrich, Martina M. | Grutter, Michel | Garcia–Yee, Jose | Torres–Jardon, Ricardo | Ruiz–Suarez, Luis Gerardo
The atmospheric composition of the San Diego – Tijuana border is affected by transport of air pollutants between both regions and in both directions. In this study we show NO2 transport events identified during Cal–Mex 2010 field experiment at two different ground sites, located one downwind of the other. This field campaign was designed to overlap with the closing weeks of CalNex project to observe trans–boundary pollution transport in this area. The measurements showed a clear dispersion pattern of NO2 towards the east–southeast on several occasions during the field experiment. Additionally, the NO2 column distribution above the Tijuana – San Diego region was reconstructed from the OMI satellite data product, and a cluster analysis with the corresponding meteorological data was performed to identify four distinct wind patterns yielding different NO2 distribution maps and detecting dominant wind patterns in this region, either towards the E–SE or E–NE approximately 86% of the time.
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