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Tightly linked di- and tri-nucleotide microsatellites do not evolve in complete independence: evidence from linked (TA) n and (TAA) n microsatellites of chickpea (Cicer arietinum L.) Полный текст
2003
Udupa, Sripada M. | Malhotra, R | Baum, Michael
In order to understand the dynamics of microsatellite evolution, we have studied allelic variation at a closely linked (TA) n and (TAA) n microsatellite loci in 114 land races of chickpea (Cicer arietinum L.), sampled worldwide. These two loci are separated by 27 bp. The two loci showed a very high degree of polymorphism and hence the combined length with the genetic diversity of 0.93, 0.90 and 0.98 for (TAA) n , (TA) n and the combined length, respectively. Using the variation data at the linked loci, a standardized index of linkage disequilibrium was also computed (I S A =0.092), which tests the null hypothesis of no linkage and was significant, indicating the presence of linkage disequilibrium. Furthermore, the dynamics of allelic variation showed that there is a threshold combined length, below which both (TAA) n and (TA) n loci evolve independently, and above which, if one locus increase in size, the other closely linked locus has a tendency to decrease its size and vice versa, without change in the overall ratio of (TAA) n and (TA) n allele sizes at the region. This result indicates that there are processes in the cell, which ‘read’ the combined size of the two loci both for proportion and length and determine the direction of tightly linked di- and tri-nucleotide repeat evolution.
Показать больше [+] Меньше [-]Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley Полный текст
2003
Castro, Ariel J. | Capettini, Flavio | Corey, Ann | Filichkina, Tanya | Hayes, Patrick M. | Kleinhofs, Andris | Kudrna, D. | Richardson, Kelley | Sandoval‐Islas, Sergio | Rossi, Carlos | Vivar, Hugo
Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley Полный текст
2003
Castro, Ariel J. | Capettini, Flavio | Corey, Ann | Filichkina, Tanya | Hayes, Patrick M. | Kleinhofs, Andris | Kudrna, D. | Richardson, Kelley | Sandoval‐Islas, Sergio | Rossi, Carlos | Vivar, Hugo
The identification and location of sources of genetic resistance to plant diseases are important contributions to the development of resistant varieties. The combination of different sources and types of resistance in the same genotype should assist in the development of durably resistant varieties. Using a doubled haploid (DH), mapping population of barley, we mapped a qualitative resistance gene (Rpsx) to barley stripe rust in the accession CI10587 (PI 243183) to the long arm of chromosome 1(7H). We combined the Rpsx gene, through a series of crosses, with three mapped and validated barley stripe rust resistance QTL alleles located on chromosomes 4(4H) (QTL4), 5(1H) (QTL5), and 7(5H) (QTL7). Three different barley DH populations were developed from these crosses, two combining Rpsx with QTL4 and QTL7, and the third combining Rpsx with QTL5. Disease severity testing in four environments and QTL mapping analyses confirmed the effects and locations of Rpsx, QTL4, and QTL5, thereby validating the original estimates of QTL location and effect. QTL alleles on chromosomes 4(4H) and 5(1H) were effective in decreasing disease severity in the absence of the resistance allele at Rpsx. Quantitative resistance effects were mainly additive, although magnitude interactions were detected. Our results indicate that combining qualitative and quantitative resistance in the same genotype is feasible. However, the durability of such resistance pyramids will require challenge from virulent isolates, which currently are not reported in North America.
Показать больше [+] Меньше [-]Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley Полный текст
2003
Castro, A.J. | Capettini, F. | Corey, A.E. | Filichkina, T. | Hayes, P.M. | Kleinhofs, A. | Kudrna, D. | Richardson, K. | Sandoval Islas, J.S. | Rossi, C. | Vivar, H.E.
The identification and location of sources of genetic resistance to plant diseases are important contributions to the development of resistant varieties. The combination of different sources and types of resistance in the same genotype should assist in the development of durably resistant varieties. Using a doubled haploid (DH), mapping population of barley, we mapped a qualitative resistance gene (Rpsx) to barley stripe rust in the accession CI10587 (PI 243183) to the long arm of chromosome 1(7H). We combined the Rpsx gene, through a series of crosses, with three mapped and validated barley stripe rust resistance QTL alleles located on chromosomes 4(4H) (QTL4), 5(1H) (QTL5), and 7(5H) (QTL7). Three different barley DH populations were developed from these crosses, two combining Rpsx with QTL4 and QTL7, and the third combining Rpsx with QTL5. Disease severity testing in four environments and QTL mapping analyses confirmed the effects and locations of Rpsx, QTL4, and QTL5, thereby validating the original estimates of QTL location and effect. QTL alleles on chromosomes 4(4H) and 5(1H) were effective in decreasing disease severity in the absence of the resistance allele at Rpsx. Quantitative resistance effects were mainly additive, although magnitude interactions were detected. Our results indicate that combining qualitative and quantitative resistance in the same genotype is feasible. However, the durability of such resistance pyramids will require challenge from virulent isolates, which currently are not reported in North America. | 922-930
Показать больше [+] Меньше [-]Comparative mapping of Phytophthora resistance loci in pepper germplasm: evidence for conserved resistance loci across Solanaceae and for a large genetic diversity Полный текст
2003
Thabuis, A. | Palloix, Alain | Pflieger, Stéphanie | Daubèze, A.M. | Caranta, Carole | Lefebvre, Véronique | Génétique et Amélioration des Fruits et Légumes (GAFL) ; Institut National de la Recherche Agronomique (INRA)
International audience
Показать больше [+] Меньше [-]Mapping QTLs for resistance against Globodera pallida (Stone) Pa2/3 in a diploid potato progeny originating from Solanum spegazzinii Полный текст
2003
Caromel, Bernard | Mugniery, Didier | Lefebvre, Véronique | Andrzejewski, S. | Ellisèche, D. | Kerlan, Marie-Claire | Rousselle, Patrick | Rousselle-Bourgeois, F. | Génétique et Amélioration des Fruits et Légumes (GAFL) ; Institut National de la Recherche Agronomique (INRA) | Biologie des organismes et des populations appliquées à la protection des plantes (BIO3P) ; Institut National de la Recherche Agronomique (INRA)-Université de Rennes (UR)-AGROCAMPUS OUEST | Unité d'amélioration de la pomme de terre et des plantes à bulbes ; Institut National de la Recherche Agronomique (INRA)
International audience
Показать больше [+] Меньше [-]Effect of a gap on gene flow between otherwise adjacent transgenic Brassica napus crops Полный текст
2003
Reboud, Xavier | Biologie et Gestion des Adventices (BGA) ; Etablissement National d'Enseignement Supérieur Agronomique de Dijon (ENESAD)-Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)
International audience
Показать больше [+] Меньше [-]Effect on a gap on gene flow between otherwise adjacent transgenic Brassica napus crops Полный текст
2003
Reboud, Xavier | Biologie et Gestion des Adventices (BGA) ; Etablissement National d'Enseignement Supérieur Agronomique de Dijon (ENESAD)-Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)
International audience
Показать больше [+] Меньше [-]A set of simple-sequence repeat (SSR) markers covering the Prunus genome Полный текст
2003
Aranzana, M.J. | Pineda, A. | Cossaon, P. | Dirlewanger, Elisabeth | Ascasibar, J. | Cipriani, G. | Ryder, C.D. | Testolin, R. | Abbott, Albert | King, G.J. | Iezzoni, A.F. | Arus, Pere | Institut de Recerca i Tecnologia Agroalimentàries = Institute of Agrifood Research and Technology (IRTA) | Unité de recherches Espèces Fruitières et Vigne (UREFV) ; Institut National de la Recherche Agronomique (INRA) | Universidade de Santiago de Compostela [España] = University of Santiago de Compostela [Spain] = Université de Saint-Jacques-de-Compostelle [Espagne] (USC) | Università degli Studi di Udine - University of Udine [Italie] | Horticulture Research International | Clemson University | Michigan State University [East Lansing] ; Michigan State University System
International audience
Показать больше [+] Меньше [-]Gene flow among different taxonomic units: evidence from nuclear and cytoplasmic markers in Cedrus plantation forests Полный текст
2003
Fady, Bruno | Lefèvre, Francois | Reynaud, M-Claude | Vendramin, G.G. | Bou Dagher-Kharrat, M. | Anzidei, M. | Pastorelli, R. | Savouré, A. | Bariteau, Michel | Unité de Recherches Forestières Méditerranéennes (URFM) ; Institut National de la Recherche Agronomique (INRA)
International audience
Показать больше [+] Меньше [-]Combined mapping of DALP and AFLP markers in cultivated sunflower using F9 recombinant inbred lines Полный текст
2003
Langar, K. | Lorieux, Mathias | Desmarais, Eric | Griveau, Yves | Gentzbittel, Laurent | Bervillé, A. | Diversité et génomes des plantes cultivées (UMR DGPC) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)
DOI: 10.1007/s00122-002-1087-x | International audience
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