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Roles of H19/miR-29a-3p/COL1A1 axis in COE-induced lung cancer Полный текст
2022
Zhang, Heng | Li, Xinmei | Jia, Mengmeng | Ji, Jing | Wu, Zhaoxu | Chen, Xian | Yu, Dianke | Zheng, Yuxin | Zhao, Yanjie
Occupational lung cancer caused by coke oven emissions (COE) has attracted increasing attention, but the mechanism is not clear. Many evidences show ceRNA (competing endogenous RNA) networks play important regulatory roles in cancers. In this study, we aimed to construct and verify the ceRNA regulatory network in the occurrence of COE-induced lung squamous cell carcinoma (LUSC). We performed RNA sequencing with lung bronchial epithelial cell (16HBE) and COE induced malignant transformed cell (Rf). Furthermore, we analyzed RNA sequencing data of LUSC and adjacent tissues in the cancer genome atlas (TCGA) database. Combined our data and TCGA data to determine the differentially expressed lncRNAs, miRNAs, mRNAs. lncBASE, miRDB and miRTarBase were used to predict the binding relationship between lncRNA and miRNA, miRNA and mRNA. Based on these, we construct the ceRNA network. FREMSA, dual-luciferase reporter assay, quantitative real-time PCR (qRT-PCR), western-blot were used to verify the regulatory axis. CCK8 assay, phalloidin staining, p53 detection were used to explore the roles of this axis in the COE induced malignant transformation. Results showed 7 lncRNAs, 7 miRNAs and 146 mRNAs were identified. Among these, we constructed a ceRNA network including 1 lncRNA, 2 miRNAs and 9 mRNAs. Further verification confirmed the trend of lncRNA H19, miR-29a-3p and COL1A1 were consistent with sequencing results. H19 and COL1A1 were significantly higher in Rf than in 16HBE and miR-29a-3p was reverse. Regulatory investigation revealed H19 increased COL1A1 expression by sponging miR-29a-3p. Knockdown of H19, COL1A1 or overexpression of miR-29a-3p in Rf cells could inhibit cell proliferation, increased cell adhesion and p53 level. However, knockdown of H19 while suppressing the miR-29a-3p partially rescue the malignant phenotype of Rf caused by H19. In conclusion, all these indicated H19 functioned as a ceRNA to increase COL1A1 by sponging miR-29a-3p and promoted COE-induced cell malignant transformation.
Показать больше [+] Меньше [-]Legacy metal contamination is reflected in the fish gut microbiome in an urbanised estuary Полный текст
2022
Suzzi, Alessandra L. | Stat, Michael | MacFarlane, Geoff R. | Seymour, Justin R. | Williams, Nathan LR. | Gaston, Troy F. | Alam, Md Rushna | Huggett, Megan J.
Estuaries are critical habitats subject to a range of stressors requiring effective management. Microbes are gaining recognition as effective environmental indicators, however, the response of host associated communities to stressors remains poorly understood. We examined microbial communities from seawater, sediments and the estuarine fish Pelates sexlineatus, in Australia's largest urbanised estuary, and hypothesised that anthropogenic contamination would be reflected in the microbiology of these sample types. The human faecal markers Lachno3 and HF183 were not detected, indicating negligible influence of sewage, but a gradient in copy numbers of the class 1 integron (intI-1), which is often used as a marker for anthropogenic contamination, was observed in sediments and positively correlated with metal concentrations. While seawater communities were not strongly driven by metal contamination, shifts in the diversity and composition of the fish gut microbiome were observed, with statistical links to levels of metal contamination (F₂, ₂₁ = 1.536, p < 0.01). Within the fish gut microbiome, we further report increased relative abundance of amplicon sequence variants (ASVs; single inferred DNA sequences obtained in sequencing) identified as metal resistant and potentially pathogenic genera, as well as those that may have roles in inflammation. These results demonstrate that microbial communities from distinct habitats within estuarine systems have unique response to stressors, and alterations of the fish gut microbiome may have implications for the adaptation of estuarine fish to legacy metal contamination.
Показать больше [+] Меньше [-]Enhanced Cd2+ adsorption and toxicity for microbial biofilms in the presence of TiO2 nanoparticles Полный текст
2022
Wang, Wenwen | Zhu, Shijun | Li, Nihong | Xie, Shanshan | Wen, Chen | Luo, Xia
Titanium dioxide nanoparticles (TiO₂ NPs) easily combine with other pollutants such as heavy metals because of their excellent physiochemical properties. However, how such an interaction may affect the binding behavior of metals onto biofilms remains largely unclear. This study, examined the effects of TiO₂ NPs on Cd²⁺ accumulation and toxicity for natural periphytic biofilms were examined. The adsorption kinetics showed that adding 0.1 and 1 mg/L TiO₂–NPs increased the Cd²⁺ adsorption of biofilms at equilibrium by 23.5% and 35.8%, respectively. However, adding 10 mg/L TiO₂ NPs increased the Cd²⁺ adsorption of biofilms at equilibrium by only 1.9%. The adsorption isotherms indicate that the presence of TiO₂ NPs considerably increased the Cd²⁺ adsorption capacity of the biofilms; however, this effect became less prominent at high TiO₂ NP concentrations. The optimum pH for Cd²⁺ adsorption increased with increasing Cd²⁺ and TiO₂ NP contents. At low concentrations, the coexistence of Cd²⁺ and TiO₂ NPs may facilitate their respective accumulation by stimulating the secretion of extracellular polymeric substances and enhancing the microbial activity of the biofilm. The presence of TiO₂ NPs increases the surface binding energy between Cd²⁺ and functional groups such as carboxyl groups, enhancing the Cd²⁺ accumulation on the biofilm.
Показать больше [+] Меньше [-]Interannual variations, sources, and health impacts of the springtime ozone in Shanghai Полный текст
2022
Li, Xiao-Bing | Fan, Guangqiang
In spring, ozone (O₃) pollution frequently occurrs in eastern China, but key drivers remain uncertain. In this study, interannual variations in springtime ozone in Shanghai, China, from 2013 to 2021, were investigated to assess the health impacts and the effectiveness of recent air pollution control measures. A combination of ground-level measurements of regulated air pollutants, lidar observations, and backward trajectories of air masses was used to identify the key drivers for enhancing springtime O₃. The results show that external imports of O₃ driven by atmospheric circulation are notable sources of springtime surface O₃. For example, the downward transport from the free troposphere could contribute to over 50% of surface O₃ in the morning. The surface O₃ mixing ratios in spring exhibited an upward trend of 0.93 ppb yr⁻¹ (p < 0.05) from 2013 to 2021. The change in meteorological variables, particularly the increase in air temperature, could explain nearly 87% of the springtime O₃ upward trend. The change in anthropogenic emissions of precursors only contributed to a small fraction (<13%) of the increase in springtime O₃. The cumulative exposure of urban residents to O₃ in spring also exhibited a significant upward trend (111 ppb yr⁻¹, p < 0.05). With the rapid increase in surface O₃, premature respiratory mortality attributable to O₃ exposure has fluctuated at approximately 2933 deaths per year since 2016, even though the total deaths from respiratory diseases have significantly declined. Long-term exposure to high O₃ concentrations is a significant contributor to premature respiratory mortality.
Показать больше [+] Меньше [-]Early-life exposure to bisphenol A induces dysregulation of lipid homeostasis by the upregulation of SCD1 in male mice Полный текст
2022
Fang, Ruyue | Yang, Shaohua | Gu, Xiaozhen | Li, Changqing | Bi, Nanxi | Wang, Hui-Li
Exposure of Bisphenol A (BPA) is closely associated with an increased prevalence of obesity-related metabolic syndrome. However, the potential mechanism of BPA-induced adipogenesis remains to be fully elucidated. Herein, potential mechanisms of BPA-induced adipogenesis in 3T3-L1 preadipocytes were evaluated using RNA-Seq. Then, using an early-life BPA exposure model, we further evaluated the effects of BPA exposure on lipid and glucose homeostasis. The results showed that lipid content in 3T3-L1 adipocytes was significantly increased after BPA exposure (p < 0.01) and male C57BL/6 mice with the dose of 500 μg/kg/day BPA by once-a-day oral administration for 8 weeks displayed a NAFLD-like phenotype. RNA-Seq analysis of preadipocytes showed that BPA exposure affected multiple biological processes including glycosphingolipid biosynthesis, regulation of lipolysis in adipocytes, PPAR signaling pathway and fatty acid metabolism. The dysregulation in a series of genes of mice was associated to de novo lipogenesis and lipid transport, which was linked to obesity. Importantly, we also found a significant expression increase of stearoyl-CoA desaturase 1 (SCD1) and a significant decrease of apolipoprotein D (APOD) in both fat (p < 0.01) and livers (p < 0.01) of male mice. Besides, the dysregulation of pro-inflammatory genes (TNF-α,IL-6 and SAA3) showed that BPA exposure promoted progression of hepatic inflammation. In conclusion, this study elucidated a novel mechanism in which obesity associated with BPA exposure by targeting SCD1. Exposure to BPA should be carefully examined in the chronic liver metabolic diseases.
Показать больше [+] Меньше [-]Formulating Convolutional Neural Network for mapping total aquifer vulnerability to pollution Полный текст
2022
Nadiri, Ata Allah | Moazamnia, Marjan | Sadeghfam, Sina | Gnanachandrasamy, Gopalakrishnan | Venkatramanan, Senapathi
Aquifer vulnerability mapping to pollution is topical research activity, and common frameworks such as the basic DRASTIC framework (BDF) suffer from the inherent subjectivity. This paper formulates an artificial intelligence modeling strategy based on Convolutional Neural Network (CNN) to decrease subjectivity. This formulation considers three definitions of intrinsic, specific, and total vulnerabilities. Accordingly, three CNN models are trained and tested to calculate IVI, SVI, and TVI, respectively referring to the intrinsic, specific, and total vulnerability indices. The formulation is applied in an unconfined aquifer northwest of Iran and delineates hotspots within the aquifer. The area under curve (AUC) values derived by the receiver operating curves evaluate the vulnerability indices versus nitrate concentrations. The AUC values for BDF, IVI, SVI, and TVI are 0.81, 0.91, 0.95, and 0.95, respectively. Therefore, CNNs significantly improve the results compared to BDF, but IVI, SVI, and TVI have approximately identical performances. However, the visual comparison between their results provides evidence that significant differences exist between the spatial patterns despite identical AUC values.
Показать больше [+] Меньше [-]Microplastic load and polymer type composition in European rocky intertidal snails: Consistency across locations, wave exposure and years Полный текст
2022
Ehlers, Sonja M. | Ellrich, Julius A. | Koop, Jochen H.E.
Microplastics (<5 mm) are emerging pollutants in oceans worldwide. As such small particles are easily ingested, microplastics are found in numerous pelagic and benthic organisms. However, information on microplastics in rocky intertidal organisms and habitats is relatively scant. Therefore, we examined snails and water samples from wave-sheltered and wave-exposed rocky intertidal habitats in Helgoland (North Sea), Cap Ferrat and Giglio (Mediterranean) and Madeira (Atlantic Ocean) in 2019–2020 for microplastics. Furthermore, we examined snails from the same habitats in Helgoland, Cap Ferrat and Giglio in 2007–2009. In total, we performed 362 individual micro-Fourier-transform infrared spectroscopy (μFTIR) measurements on the snails and water samples. While the snails contained 50 microplastics (composed of nine polymer types), the water samples contained 24 microplastics (comprising six polymer types). Microplastic load and polymer type composition in the snails were rather similar across locations, wave exposure and years. Also, microplastic load and polymer composition in the water samples were similar across locations and wave exposure. Moreover, snail and water microplastic loads were significantly correlated which indicates that snails are useful bioindicators for microplastic loads in rocky intertidal habitats. Interestingly, the majority of the microplastics consisted of paint chips that likely derived from ships. Overall, our study provides the first comprehensive microplastic record in rocky intertidal organisms across locations, wave exposure and years that can serve as a baseline to examine historic and future microplastic dynamics in rocky intertidal systems.
Показать больше [+] Меньше [-]Inventory of riverine dissolved organic carbon in the Bohai Rim Полный текст
2022
Sun, Cece | Liu, Jun | Li, Menglu | Zang, Jiaye | Wang, Lu | Wu, Wentao | Zhang, Aijun | Wang, Junjie | Ran, Xiangbin
Riverine carbon (C) composition and export are closely related to changes in the coastal environment and climate. Excessive C inputs from rivers to seas and their subsequent decomposition could result in harmful algal blooms and ecosystem degradation in the coastal sea. In this study, we explored the C transportation and composition in the 24 major rivers of the Bohai Sea (BS) Rim based on the investigation of dissolved organic carbon (DOC), carbon stable isotopes (δ¹³CDOC) and chromophoric dissolved organic matter (CDOM). The results showed that the riverine DOC concentrations were high (10.6 ± 6.04 mg/L) in the BS Rim compared with the DOC levels in the main rivers in Eastern China (4.98 ± 2.45 mg/L). The δ¹³CDOC ranged from −28.29‰ to −25.32‰ in the rivers of the BS Rim, suggesting that the DOC mainly originated from riverine plankton, soil organic matter mainly induced by C3 plants, and sewage. The excitation-emission matrix fluorescence spectroscopy of the CDOM indicated that a soluble, microbial by product-like material accounted for the largest proportion (approximately 40%) of CDOM in these rivers and that CDOM mainly originated from autochthonous riverine sources with high protein-like components. The rivers in the BS Rim transported approximately 0.55 Tg C of DOC to the BS each year, with more than 70% of reactive C based on the CDOM composition. The DOC yields in terms of unit drainage area transported from the small rivers to the BS were higher compared to those of the larger rivers in the world, which indicated that the small rivers in the Bohai Rim could be an important source of the C in the BS. This study would enrich our understanding of environmental evolution in coastal areas with numerous small rivers.
Показать больше [+] Меньше [-]Survival outcomes of rehabilitated riverine turtles following a freshwater diluted bitumen oil spill Полный текст
2022
Otten, Joshua G. | Williams, Lisa | Refsnider, Jeanine M.
Rehabilitation is often used to mitigate adverse effects of oil spills on wildlife. With an increase in production of alternatives to conventional crude oil such as diluted bitumen (dilbit), emergency spill responders and wildlife rehabilitators need information regarding the health and survival of free-ranging vertebrates exposed to dilbit under natural conditions. In 2010, one of the largest freshwater oil spills in the United States occurred in the Kalamazoo River in Michigan, when over 3.2 million liters of spilled dilbit impacted 56 km of riverine habitat. During 2010 and 2011 cleanup efforts, thousands of northern map turtles (Graptemys geographica) were captured from oiled stretches of the river, cleaned, rehabilitated, and released. We conducted extensive mark-recapture surveys in 2010, 2011, and 2018–2021, and used this dataset to evaluate the monthly survival probability of turtles 1–14 months post-spill and 8–11 years post-spill based on whether turtles were temporarily rehabilitated and released, overwintered in captivity and then released, or were released without rehabilitation. We found that rehabilitated or overwintered turtles had a higher probability of survival 1–14 months post-spill than non-rehabilitated turtles; however, 8–11 years post-spill the among-group differences in monthly survival probability had become negligible. Additionally, following the oil spill in 2010, nearly 6% of northern map turtles were recovered dead, died during rehabilitation, or suffered injuries that precluded release back into the wild. Our results demonstrate that exposure to dilbit in free ranging turtles causes direct mortality, while effort spent on the capture and rehabilitation of oiled freshwater turtles is important as it increases monthly survival 1–14 months post-spill.
Показать больше [+] Меньше [-]The fragmentation of nano- and microplastic particles from thermoplastics accelerated by simulated-sunlight-mediated photooxidation Полный текст
2022
Song, Young Kyoung | Hong, Sang Hee | Eo, Soeun | Shim, Won Joon
The plastic debris that washes ashore and litters the shoreline often undergoes weathering under sunlight exposure, such that it fragments to form nanoplastics and microplastics, but the fragmentation rate for many thermoplastics is unknown. In this study, three major thermoplastics were exposed to simulated sunlight in an accelerated weathering chamber to evaluate the speed of photooxidation-induced fragmentation. The initiation of photooxidation-induced fragmentation extrapolated from the accelerated weathering chamber to real sunlight exposure in South Korea followed the order of PS (< 1 year) > PP (< 2 years) > LDPE (> 3 years). The surface cracks created by photooxidation were not directly reflected in the initiation of fragmentation of thermoplastics. The initiation of fragmentation was faster in PS than other polymers, but the total abundance of particles produced, and increasing ratio (exposure/non-exposure) were comparable or lower than those of PP. The increasing ratio pattern between nanoplastics and small microplastics of PP differed noticeably from other polymers. The initiation of nanoplastic and small-microplastic fragmentation determined in this study will be useful for the further estimation of secondary microplastic production by weathering and thus for decision-making regarding methods for the timely removal of plastic litter in the environment.
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