In atoll lagoons of French Polynesia, growth and reproduction of pearl oysters are mainly driven by plankton concentration. However, the actual diet of black-lip pearl oysters P. margaritifera in these lagoons is poorly known. To fill this gap, we used the flow through chamber method to measure clearance rates of P. margaritifera in Ahe atoll lagoon (Tuamotu Archipelago, French Polynesia). We found : (i) that pearl oysters cleared plankton at a rate that was positively related to plankton biovolume, (ii) that nanoflagellates were the main source of carbon for the pearl oysters, (iii) that the quantity and origin of carbon filtrated by pearl oysters was highly dependent on the concentration and composition of plankton. These results provide essential elements for the comprehension of growth and reproduction variability of pearl oysters in atoll lagoons of French Polynesia.

Microcosms, each consisting of 2 L natural surface seawater maintained in 2.3-L glass bottles, were immersed at a depth of 6 metres. The renewal of ten percent of microcosm volumes was carried out every other day. Phytoplankton-containing seawater was used for renewal (previously filtered through 25-, 50- or 200-μm cut-off). Phytoplankton community pigment analysis (by HPLC) and flow cytometry analysis were performed. After 13 days, data exhibited phytoplankton characteristics in microcosms in the same range as that of the natural surrounding sea water over the same period. Furthermore, in these microcosms, a negative correlation was observed between the filtration cut-off used for renewal water, and the eukaryote cell count. Herbicides were tested as commercial mixtures at 1, 10 and 100 μg.L-1 active principal. Both Frontier® (dimethenamid) and Basamais® (bentazon) induced significant modifications of the phytoplankton populations at every concentration tested. Such results suggest a possible disturbance in polluted coastal areas.

Degradation of coastal ecosystems in the Great Barrier Reef (GBR), Australia, has been linked with a decline in water quality from land-based runoff. This paper examines the reduction in current end-of-catchment loads required for total suspended solids (TSS) and dissolved inorganic nitrogen (DIN) to achieve GBR water quality guidelines. Based on first-order estimates of sustainable pollutant loads, current TSS and DIN loads would need to be reduced by approximately 7000ktons/y (41%) and 6000tons/y (38%), respectively. Next, these estimated reductions for TSS and DIN are compared with Reef Plan targets for anthropogenic sediment (−20% by 2020) and nitrogen (−50% by 2013) loads. If successful, these targets will accomplish approximately 40% of TSS and 92% of DIN load reductions required to achieve sustainable loads to the GBR lagoon. These first-order estimates elucidate the need to establish ecologically relevant targets for river pollutant loads to the GBR for management and policy.

Responses of biological indices and oxidative stress biomarkers were studied in the giant clam Tridacna maxima and in the fish Epinephelus merra collected from two sites differing by their level of contamination in the French Polynesian Moorea island. Higher levels of catalase (CAT), glutathione-S-transferases (GST) and thiobarbituric acid reactive substances (TBARs) were observed in the hepatopancreas of T. maxima and in the liver of E. merra compared to muscle. CAT and TBARs levels were significantly higher in the hepatopancreas of clams collected from the impacted site (Vaiare) compared to the reference site (bay of Cook). The same pattern was observed for TBARs levels in the liver of E. merra. These results indicate that both organisms from the impacted site were exposed to contaminants leading to an oxidative stress and demonstrate, for the first time, the usefulness of T. maxima and E. merra as sentinel species for biomonitoring reef environments.

Contaminated sediments continue to be a global problem that is too often not addressed in a logical, tiered framework. Such frameworks, when they exist, typically are restricted to assessment and prioritization and do not include possible remedies with accompanying follow-up monitoring to ensure those remedies were successful and further remedies are not necessary. A logical, tiered framework that encompasses all of the above (i.e., assessment through to post-remedy monitoring) is described. This framework was developed by the Canadian Government for use in Canada but has wider applications.

Increased human habitation has led to a 30 to 50-fold increase in nutrient loads to the coastal waters of Adelaide, resulting in the loss of over 5000ha of seagrass meadows. The rate of loss since the 1940s has been irregular, averaging 85hayr⁻¹, marked by a substantial peak between 1971 and 1977. A modelling approach allowed comparison of the annual input with the annual uptake rates for the different biotic components in the seagrass bed. In 2005, the estimated uptake of ammonium (465tyr⁻¹) and nitrate (3.04tyr⁻¹) by the seagrass and associated epiphytes in the Adelaide region accounted for 31% of the ammonium and <1% of the nitrate that is currently discharged into the coastal waters. Environment Improvement Programs, such as the one implemented in 1996, may reduce the total nitrogen loads to 700tyr⁻¹, possibly stemming further losses and facilitating recolonisation of new seagrass.

The aim of the present study is to provide information on the ecological integrity of an industrial district located in the estuary of Pará River (Amazon estuary), by applying a selection of fish based multimetric indices of ecosystem integrity: Abundance Biomass Comparation (ABC); Biological Health Index; Estuarine Fish Community, Transitional Fish Classification and Estuarine Biotic Integrity Indexes. To evaluate the impacts of the industrial area and cargo terminal, three areas were considered: Zone 1, (maximum impact), Zone 2 (median risk) and Zone 3 (reference area). All the biological indices used were considered to be excellent indicators of the ecological integrity of the different sectors of the study area and were especially effective for the demonstration of the critical alterations of the fish community of Zone 1 and Zone 2. The simultaneous use of diferents indices family, with diferente assumptions, did strengthen the results enhancing the confidence in the diagnostic.

Total mercury (Hg) and methylmercury (MeHg) were analyzed in near surface sediments (0–2cm) and biota (zooplankton, macro-invertebrates, finfish) collected from Narragansett Bay (Rhode Island/Massachusetts, USA) and adjacent embayments and tidal rivers. Spatial patterns in sediment contamination were governed by the high affinity of Hg for total organic carbon (TOC). Sediment MeHg and percent MeHg were also inversely related to summer bottom water dissolved oxygen (DO) concentrations, presumably due to the increased activity of methylating bacteria. For biota, Hg accumulation was influenced by inter-specific habitat preferences and trophic structure, and sediments with high TOC and percent silt–clay composition limited mercury bioavailability. Moreover, hypoxic bottom water limited Hg bioaccumulation, which is possibly mediated by a reduction in biotic foraging, and thus, dietary uptake of mercury. Finally, most biota demonstrated a significant positive relationship between tissue and TOC-normalized sediment Hg, but relationships were much weaker or absent for sediment MeHg. These results have important implications for the utility of estuarine biota as subjects for mercury monitoring programs.

The present study reports the level of total petroleum hydrocarbon (TPH) in 27 commercially important fish, crustaceans and cephalopods from Orissa coast, Bay of Bengal to provide the baseline data for oil contamination in marine biota. The results showed significant differences in the TPH concentration in different species. Of all fish, Carangoides malabaricus showed the maximum TPH level (av. 13.70μgg⁻¹). In cephalopods, Loligo recorded the maximum TPH (av. 14.87μgg⁻¹) while Metapenaeus dobsoni recorded the maximum TPH (av. 13.18μgg⁻¹) among crustaceans. The concentration of TPH recorded in the present study were higher than the reported values from other studies in Bay of Bengal but were comparable with those of other Indian coast and Gulf water. The species recording maximum concentration and giving significant correlation coefficient may be of interest in oil pollution monitoring and can be used as indicator of hydrocarbon pollution in the region.

Cold-water coral reefs represent some of the most biodiverse and biomass rich ecosystems in the marine environment. Despite this, ecosystem functioning is still poorly understood and the susceptibility of key species to anthropogenic activities and pollutants is unknown. In European waters, cold-water corals are often found in greatest abundance on the continental margin, often in regions rich in hydrocarbon reserves. In this viewpoint paper we discuss some of the current strategies employed in predicting and minimizing exposure of cold-water coral reef ecosystems on the Norwegian margin to waste materials produced during offshore drilling operations by the oil and gas industry. In the light of recent in situ and experimental research conducted with the key reef species Lophelia pertusa, we present some possible improvements to these strategies which may be utilized by industry and managers to further reduce the likelihood of exposure. We further highlight important outstanding research questions in this field.