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Asma ve Narlardan İzole Edilen Grapevine leafroll-associated virus-1 İzolatlarının Kısmi Sekanslarının Karşılaştırmalı Genomik Analizleri Полный текст
2017
Eminur Elçi | Mona Gazel | Kadriye Çağlayan
Asma yaprak kıvırcıklık (grapevine leafroll) hastalığı geçmişten bu yana bağ virüs hastalıkları içerisinde ekonomik önem derecesi yüksek olan dünya çapında yayılım gösteren bir hastalıktır. Closterovirus cinsine ait virüs üyeleri içerisinde, Asma yaprak kıvırcıklık virüsü 1 (Grapevine leafroll-associated virus 1) (GLRaV-1) en eski olanıdır. Bağlarda önemli verim kayıplarına neden olan bu virüs, özellikle yapraklarda kıvrılma simptomu ile tanımlanır. Nar bitkisi, ekonomik değeri yüksek bitkiler arasında yer almakta olup henüz az sayıda virüs hastalıkları tanımlanmış ancak son yıllarda yürütülen çalışmalarda bu bitkinin de GLRaV-1’in konukçusu olabileceği bildirilmiştir. Bu çalışmanın amacı, bağ ve narlardan elde edilen GLRaV-1 izolatlarının genomik olarak kıyaslanmasıdır. Bu amaçla, 2014 yılında Hatay ve Niğde illerinden toplanan asma ve nar örneklerinden total RNA ve dsRNA izolasyonları yapılmış, virüs genomuna özgü 2 farklı bölgenin (hareket (movement) proteini (p24) ve ısı şok (heatshock) proteinini (HSP70h) çoğaltan primerler kullanılarak RT-PCR ile analizleri yapılmış elde edilen ürünler klonlanmış ve sekans analizleri yapılmıştır. Ayrıca Closterovirüs’ün HSP70h genine özgü dejenere primer kullanılarak DOP-PCR analizleri yapılmıştır. DNA dizi analizlerinin sonunda elde edilen kısmi genomun, BLAST analizleri yapıldıktan sonra filogenetik analizleri yapılmıştır. Bu çalışma sonunda, yeni bir konukçu olduğu düşünülen nardan izole edilen GLRaV-1 izolatlarının asma izolatları ile kıyaslamalı olarak analiz edilmesi sağlanmış ve izolatlar arası yüksek oranda benzerlik olduğu tespit edilmiştir.
Показать больше [+] Меньше [-]Effect of Some Abiotic Stress Factories on Savrun Spinach (Spinacea oleracea L.) Полный текст
2017
Nezahat Turfan
In this study were investigated that resistance to salinity, heavy metals, drought and calcerous stress in Savrun (Spinacea oleracea L.) spinach. For this aim, 5-6 leafed seedlings were exposed to NaCl (75, 150 and 225 mM); heavy metals (Fe, Ni and Zn 0.2 mg/L), drought (50%) and 0.2% CaCO3 applications for four weeks half-weekly which plants grown under controlled conditions. Depends on result chlorophyll a, chlorophyll b, total cclorophyll, carotenoids, β-caroten and lycopen increased in drought and CaCO3 treatments. Total soluble protein and GuPX activity were found higher in all stress treatments, proline content increased in NiCl2, 75 ve 150 mM NaCl treatments. While APX activity was higher in 75 mM NaCl and ZnCl2; CAT was higher in 150 mM NaCl and others stres treatments except drought. SOD activity were noted higher in drought, CaCO3 and 225 mM NaCl stresses groups. MDA content was lower in all treatments except FeCl3 and, H2O2 were lower in 225 mM NaCl and drought while it was higher in others. As a result, it was found that tolerance of Savrun spinach is higher to CaCO3 and drought but sensitivity of it is higher to 225 mM NaCl, ZnCl2 and FeCl3. Also it was determined that Savrun genotype is moderate tolerance to NiCl2 and 75 Mm NaCl. However parameters of tolerance to stress that treated on spinach seedling showed variability in Savrun spinach.
Показать больше [+] Меньше [-]Evaluation of Production Process and Capacity Utilization of Olive Oil Mills in Turkey Полный текст
2017
Selda Murat Hocaoglu | İrfan Baştürk | Betül Hande Gürsoy Haksevenler | Cihangir Aydöner
In this study, a survey and data assessment has been made to clarify the status of olive oil mills which operate in Turkey. According to the study, there have been around 1000 commercial olive oil mills that mostly small and medium-sized and about 1 million tons of olives at these mills have been processed in our country seasonally and total maximum capacity of the olive oil mills was estimated to be about 5 million tons of olive oil. The average capacity utilization rate of the sector is also around 20%. About 71% of olive oil mills have three-phase decanter, 27% of them have two-phase decanter and 2% are operated as press extraction process. On the other hand, 78% of three -phase decanters used in olive oil mills can easily convert to 2-phase systems without loss of capacity and efficiency, but only 2% of them cannot be convert to two-phase systems. Approximately 89% of the olive oil mills are stored the olive oil mill wastewater in the evaporation lagoons.
Показать больше [+] Меньше [-]Agricultural Chemical Use in Tomato Farming in Kazova Region of Tokat Province Полный текст
2017
Bilge Gözener | Murat Sayılı | Aysun Çağlar
Pesticide uses in Kazova region of Tokat province were assessed in this study. Data were gathered through Simple Random Sampling method with questionnaires made with 72 agricultural enterprises. Resultant data were assessed through arithmetic means and percentiles. A factor analysis was also performed on producer opinions about pesticide use in tomato. Average enterprise size was 20.27 da and tomato is cultivated over 56.98% of these lands. Of the participant producers, 97.22% were not member of any associations or cooperatives. About 91.67% of the participant producers prefer chemical treatments. Producer usually use chemicals based on their previous experiences and recommendations of chemical-fertilizer dealers. Price is the dominant factor while selecting the chemicals to be sued. The dose prescribed by the dealer is generally used. Of the participant producers, 91.67% indicated that they didn’t know about the time to be passed between the last chemical treatment and the harvest; 44.44% don’t think that pesticides they use leaved residues over the products and 95.83% indicated that chemical treatments didn’t create environmental pollution. With the factor analysis, KMO value was calculated as 0.553 and 14 variables thought to be effective on producer opinions about agricultural chemical uses were gathered under 6 factors (toxicity, attention in treatments, human health, conscious production and consumption, environmental harm, hygiene).
Показать больше [+] Меньше [-]Effect of Soaking and Boiling on Anti-nutritional Factors, Oligosaccharide Contents and Protein Digestibility of Newly Developed Bambara Groundnut Cultivars Полный текст
2017
Olaposi Adeleke | Oladipupo Qudus Adiamo | Olumide Samson Fawale | Gbeminiyi Olamiti
Newly developed Bambara groundnut (Vigna subterranea L.) seeds (Accessions No: TVSU 5 – Bambara Groundnut White (BGW) and TVSU 146 – Bambara Groundnut Brown (BGB)) were collected from International Institute of Tropical Agriculture (IITA), Nigeria, planted and harvested. The effects of processing methods (soaking and boiling) on anti-nutritional factors and oligosaccharides content and protein digestibility of BGW and BGB compared with Bambara groundnut commercial (BGC) seeds were investigated. Soaking and boiling significantly reduced the anti-nutritional factors of the samples and the effect increased as processing time was elongated. Sample BGC had lower anti-nutritional factors than BGW and BGB after soaking for 48 h. Tannin contents of the samples were reduced drastically by 99 % throughout the soaking periods. Greatest loss in raffinose level was observed in BGB (59%) and BGW (50%) after boiling for 60 min compared with BGC (43%). The loss in stachyose content of the samples varies with processing and BGC (59%) had greatest loss after boiling for 60 min while soaking for 48 h reduced that of BGB and BGW by 57 and 35%, respectively. Boiling for 60 min increased the in vitro protein digestibility of BGB (89.34 %) compared with BGW (87.48%) and BGC (82.89%). Overall, the results demonstrated that soaking and boiling of newly developed Bambara groundnut seeds could improve the nutritive quality of the seeds.
Показать больше [+] Меньше [-]Characterization of Rhizobia from Root Nodule and Rhizosphere of Lablab purpureus and Vigna sinensis in Bangladesh Полный текст
2017
Safirun Pervin | Bushra Jannat | Sohana Al Sanjee
Nitrogen fixation resulting from mutual symbiosis of rhizobia and cultivated legume plants is therefore critical to food security as it directly affects agricultural production. Biological Nitrogen Fixation (BNF) can be an important factor in sustainable agriculture.The isolation and identification of different slow growing and fast growing rhizobial strains from the nodules of two leguminous plant species. Symbiotic nitrogen fixing Rhizobium spp. was isolated from (Lablab purpureus and Vigna sinensis). Nodules samples were collected from plants growing in different Districts of Bangladesh and the Glucose-Peptone Agar (GPA), Congo red, Yeast Mannitol Agar (YMA) containing 2% NaCl were employed to make presumptive decisions on the recognition and classification of the isolated bacterial strains. All the isolates were found with poor absorption of dye Congo red and little or no growth on the media of GPA and without altering the pH. Almost all of the isolates exhibit growth on 2% NaCl, poor growth on GPA, thus confirming the rhizobia. After biochemical tests like catalase test and citrate utilization test isolates were confirmed as Rhizobia. The presence of rhizobia on root nodules of leguminous Plant. Not only the leguminous Plant but also the rhizosphere contains rhizobia which help in soil fertilization.
Показать больше [+] Меньше [-]Late Blight of Potato (Phytophthora infestans) I: Fungicides Application and Associated Challenges Полный текст
2017
Abdul Majeed | Zahir Muhammad | Zabeeh Ullah | Rafi Ullah | Habib Ahmad
Potato (Solanum tuberosum L.) has been remained an important agricultural crop in resolving global food issues through decades. The crop has experienced enormous growth in terms of production throughout the world in recent decades because of improvement in agricultural mechanization, fertilizers application and irrigation practices. Nevertheless, a significant proportion of this valuable crop is still vulnerable to losses due to prevalence of different viral, bacterial, fungal and nematodes infestations. Late blight, caused by Phytophthora infestans (Mont.) de Bary, is one of the most threatening pathogenic diseases which not only results in direct crop losses but also cause farmers to embrace huge monetary expenses for disease control and preventive measures. The disease is well known for notorious ‘Irish Famine’ which resulted in drop of Irish population by more than 20% as result of hunger and potato starvation. Globally, annual losses of crop and money spend on fungicides for late blight control exceeds one trillion US dollars. This paper reviews the significance of late blight of potato and controlling strategies adopted for minimizing yield losses incurred by this disease by the use of synthetic fungicides. Advantages and disadvantages of fungicides application are discussed.
Показать больше [+] Меньше [-]Determination of Malondialdehyde (MDA), Superoxide Dismutase (SOD) and Glutathione Peroxidase (GPx) Levels in Kangal Dogs with Maternal Cannibalism Полный текст
2017
Nazlı Ercan | Mustafa Koçkaya
Oxidative stress, which plays an active role in the pathogenesis of various diseases, continues to be relevant in assessing the condition changes such as aggression. Some of Kangal dogs have been found to eat their own puppies during their first 24 hours following birth, as a case called maternal cannibalism. The present study aims to determine the levels of serum malondialdehyde (MDA), which is a product of lipid peroxidation, and serum glutathione peroxidase (GPx) and superoxide dismutase (SOD) enzymes, which are the parameters of antioxidant defense system, and total protein and albumin levels and to show their relationship with cannibalism. The study material consists of blood and blood serum of 30 Kangal dog breed in total, 15 of which have maternal cannibalism and 15 haven’t observed maternal cannibalism as a control group. Glutathione peroxidase, superoxide dismutase, malondialdehyde levels were investigated by means of spectrophotometric method in blood serum of these animals. The difference between the mean values of total protein, GPx, SOD, MDA and albumin was statistically significant in the results obtained. These findings conclude that oxidative stress and antioxidative metabolism plays a role in the pathogenesis of cannibalism in dogs.
Показать больше [+] Меньше [-]Prevalence and Antimicrobial Susceptibility of Escherichia Coli O157 Isolated From Raw Milk Marketed in Chittagong, Bangladesh Полный текст
2017
Md. Kauser-Ul Alam | Shireen Akther | Nazmul Sarwar | Shamsul Morshed | Goutam Kumar Debnath
Escherichia coli is an emerging public health concern in most countries of the world. It is an important cause of food-borne human disease. The present study assessed the prevalence and determined the antibiotic resistance patterns of E. coli from raw milk marketed in Chittagong, Bangladesh. Of the raw milk marketed in Chittagong ~33(18%) of the 186 raw milk samples of it contains E. coli, indicator bacteria for any enteric pathogens. The mean viable count of total bacteria was 4.04×108 cfu/ml and the mean viable count of E. coli in the contaminated raw milk was 1.88×106 cfu/ml. E. coli from only six (18.2%) of the 33 positive samples yielded colourless colonies across the CT-SMAC, suggesting the probable presence of populations belonging to the serotype O157 and rest of the isolates 27 (81.82%) produced coloured colony on CT-SMAC considering the probable presence of populations belonging to the serotype non-O157. Growth of probable E. coli O157, as evidenced by the colourless colonies on CT-SMAC compared to coloured colonies from other bacteria. Confirmed isolates were further subjected to antimicrobial susceptibility test using the Agar disc diffusion technique. Antibiotics susceptibility profile showed that all the isolates in case of E. coli O157, penicillin (100%), tetracycline (100%), amoxicillin (83.33%) and erythromycin (83.33%) were the most resistant whereas ciprofloxacin (66.67%), gentamicin (50.0%), and streptomycin (50.0%) were the most sensitive antibiotics. In case of E.coli non-O157 susceptibility profile showed that chloramphenicol (40.74%), erythromycin (40.74%) and oxacillin (37.04%) were the most resistant whereas ciprofloxacin (70.37%), sulphamethoxazole/trimethoprim (S/T) (59.26%) and gentamycin (55.55%) were the most sensitive antibiotics. The antimicrobial resistance exhibited by E. coli O157and non-O157 strains in this study is an indication of possible antibiotic abuse.
Показать больше [+] Меньше [-]Organik Asitler ve Su Ürünleri Yetiştiriciliğinde Kullanımı Полный текст
2017
Ferbal Özkan Yılmaz | Arzu Özlüer Hunt
Organik asitlerin su ürünleri yetiştiriciliğinde, fonksiyonel yem katkı maddeleri olarak kullanılmasının öngörülebilir gelecekte belirgin bir şekilde artacağı düşünülmektedir. Dünya su ürünleri yetiştiriciliğinin sürekli genişlemesi, büyük bir pazar potansiyeli oluşturmaktadır. Bununla birlikte küresel ısınmanın bir sonucu olarak, su ürünleri yetiştiriciliğinde hastalık salgınlarında artma tehlikesi, önemli bir problem olarak ortaya çıkabilecektir. Birçok ülkede antibiyotik kullanımına ilişkin yasaklar veya kısıtlama uygulamaları bulunmaktadır. Su ürünleri yetiştiriciliğinde, antibiyotiklere karşı uygulanabilir bir alternatif olarak organik asitlerin kullanımının uygunluğunu, yapılan çalışmalar ile ortaya konulmaktadır. Organik asitler, antimikrobiyal özelliklerinden dolayı zararlı bakterilerin çoğalmasını engelleyerek, hayvanların gastrointestinal sisteminde yararlı bakterilerin büyümesini teşvik ederek, hayvanların sağlığını iyileştirme özelliklerini göstermektedirler. Yapılan çalışmalar, organik asitlerin fonksiyonel yem katkı maddeleri olarak, su ürünleri yetiştiriciliği endüstrisinde sürdürülebilir bir sağlık yönetimi programının bir parçası olarak kullanılabilirliğini ortaya koymaktadır.
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