URGI genome annotation system:an integrated system for structural and functional genome annotation
2011
Amselem, Joelle | Alaux, Michael | Choisne, Nathalie | Lapalu, Nicolas | Brault, Baptiste | Keliet, Aminah | Kimmel, Erik | Alfama, Françoise | Arnoux, Sandie | Bras, Marc | Brigitte, Laetitia | Inizan, Olivier | Jamilloux, Veronique | Kreplak, Jonathan | Legeai, Fabrice | Luyten, Isabelle | Pommier, Cyril | Reboux, Sebastien | Sidibe-Bocs, Stéphanie | Lebrun, Marc-Henri | Steinbach, Delphine | Quesneville, Hadi | Institut National de la Recherche Agronomique UR 1164 Unité de Recherche Génomique-Info | Institut National de la Recherche Agronomique UMR 1099 Biologie des Organismes et des Populations Appliquée à la Protection des Plantes | Centre de Coopération Internationale en Recherche Agronomique pour le Développement
The URGI platform (http://urgi.versailles.inra.fr) develops a genome annotation system dedicated to plants and their pathogens. This Integrated System relies on: (i) pipelines for Transposable Elements annotation (REPET) and gene structural and functional predictions (ii) databases and user-friendly interfaces to browse and query the data (URGI Information System GnpIS, Genome Report System GRS), (iii) A distributed annotation system for curation of gene structure.
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