Prediction for global African swine fever outbreaks based on a combination of random forest algorithms and meteorological data
2020
Liang, Ruirui | Lu, Yi | Qu, Xiaosheng | Su, Qiang | Li, Chunxia | Xia, Sijing | Liu, Yongxin | Zhang, Qiang | Cao, Xin | Chen, Qin | Niu, Bing
African swine fever (ASF) is a virulent infectious disease of pigs. As there is no effective vaccine and treatment method at present, it poses a great threat to the pig industry once it breaks out. In this paper, we used ASF outbreak data and the WorldClim database meteorological data and selected the CfsSubset Evaluator‐Best First feature selection method combined with the random forest algorithms to construct an African swine fever outbreak prediction model. Subsequently, we also established a test set for data other than modelling, and the accuracy accuracy value range of the model on the independent test set was 76.02%–84.64%, which indicated that the modelling effect was better and the prediction accuracy was higher than previous estimates. In addition, logistic regression analysis was conducted on 12 features used for modelling and the ROC curves were drawn. The results showed that the bio14 features (precipitation of driest month) had the largest contribution to the outbreak of ASF, and it was speculated that the outbreak of the epidemic was significantly related to precipitation. Finally, we used this qualitative prediction model to build a global online prediction system for ASF outbreaks, in the hope that this study will help to decision‐makers who can then take the relevant prevention and control measures in order to prevent the further spread of future epidemics of the disease.
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