Whole genome analysis of a schistosomiasis-transmitting freshwater snail

Adema, C. | Hillier, L. | Jones, C. | Loker, E.S. | Knight, M. | Minx, P. | Oliveira, G. | Raghavan, N. | Shedlock, A. | Amaral, L. | Arican-Goktas, H. | Assis, J. | Baba, E. | Baron, O. | Bayne, C. | Bickham-Wright, Utibe, P | Biggar, Kyle K. | Blouin, M.S. | Bonning, B. | Botka, Chris | Bridger, J. | Buckley, K. | Buddenborg, S. | Caldeira, R. | Carleton, J. | Carvalho, O. | Castillo, M. | Chalmers, I. | Christensens, M. | Clifton, S. | Coustau, Christine | Cripps, R. | Cuesta-Astroz, Y. | Cummins, S. | Di Stefano, L. | Dinguirard, N. | Duval, David | Emrich, S. | Feschotte, Cédric | Feyereisen, René | Fitzgerald, P. | Fronick, Catrina | Fulton, L. | Galinier, Richard | Gava, Sandra G. | Geusz, M. | Geyer, Kathrin K. | Giraldo-Calderón, G.I. | de Souza Gomes, Matheus | Gordy, M. | Gourbal, Benjamin | Grunau, Christoph | Hanington, P. | Hoffmann, K.F. | Hughes, D. | Humphries, J. | Jackson, Daniel J. | Jannotti-Passos, Liana K. | Jeremias, Wander de Jesus | Jobling, Susan | Kamel, Bishoy | Kapusta, Aurélie | Kaur, Satwant | Koene, Joris M | Kohn, Andrea B. | Lawson, Dan | Lawton, Scott P. | Liang, Di | Limpanont, Yanin | Liu, Sijun | Lockyer, Anne E. | Lovato, Tyanna L. | Ludolf, Fernanda | Magrini, Vince | Mcmanus, Donald P | Medina, Mónica | Misra, Milind | Mitta, Guillaume | Mkoji, Gerald M. | Montague, Michael J. | Montelongo, Cesar | Moroz, Leonid L. | Muñoz-Torres, Monica | Niazi, Umar, P | Noble, Leslie | Oliveira, Francislon S. | Pais, Fabiano S. | Papenfuss, Anthony T. | Peace, Rob | Pena, Janeth J. | Pila, Emmanuel A. | Quelais, Titouan | Raney, Brian J, B. J. | Rast, Jonathan P | Rollinson, David | Rosse, Izinara C. | Rotgans, Bronwyn | Routledge, Edwin J. | Ryan, Kathryn M. | Scholte,, Larissa L.S. | Storey, K. | Swain, Martin | Tennessen, J.A. | Tomlinson, C. | Trujillo, David | Volpi, E. | Walker, A.J. | Wang, T. | Wannaporn, I. | Warren, W. | Wu, X.J. | Yoshino, T.P. | Yusuf, M. | Zhang, S.M. | Zhao, M. | Wilson, R. | Cosseau, Celine | Center for Evolutionary and Theoretical Immunology [Albuquerque, New Mexico] (CETI) ; The University of New Mexico [Albuquerque] ; New Mexico Consortium (NMC)-New Mexico Consortium (NMC) | The McDonnell Genome Institute (MGI) ; Washington University in Saint Louis (WUSTL) | INSTITUTE OF BIOLOGICAL AND ENVIRONMENTAL SCIENCES ; University of Aberdeen | Department of Microbiology, Immunology & Tropical Medicine and Research Center for Neglected Diseases of Poverty ; The George Washington University (GW) | Division of Science & Mathematics ; University of the District of Columbia | Fiocruz Minas - René Rachou Research Center / Instituto René Rachou [Belo Horizonte, Brésil] ; Fundação Oswaldo Cruz / Oswaldo Cruz Foundation (FIOCRUZ) ; Pasteur Network (Réseau International des Instituts Pasteur)-Pasteur Network (Réseau International des Instituts Pasteur) | Sans affiliation | Biology Department ; Medical University of South Carolina [Charleston] (MUSC) | Laboratory of Bioinformatics and Molecular Analysis ; Federal University of Uberlândia [Uberlândia] (UFU) | Department of Life Sciences, College of Health and Life Sciences ; Brunel University London [Uxbridge] | Institut Sophia Agrobiotech (ISA) ; Institut National de la Recherche Agronomique (INRA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS) | Department of Integrative Biology ; Oregon State University (OSU) | Department of Pathobiological Sciences ; University of Wisconsin-Madison | Institute of Biochemisty and Department of Biology ; University of Ottawa [Ottawa] | Iowa State University (ISU) | Department of Information Technology, Harvard Medical School ; Harvard Medical School [Boston] (HMS) | Sunnybrook Health Sciences Centre, Department of Immunology ; University of Toronto | Department of Human Genetics [Salt Lake City] ; University of Utah | Biology, New Mexico State University ; New Mexico State University ; New Mexico Consortium (NMC)-New Mexico Consortium (NMC) | Institute of Biological, Environmental and Rural Sciences (IBERS) ; Biotechnology and Biological Sciences Research Council (BBSRC)-Aberystwyth University | European Bioinformatics Institute [Hinxton] (EMBL-EBI) ; EMBL Heidelberg | Faculty of Science, Health and Education ; University of the Sunshine Coast (USC) | The Walter and Eliza Hall Institute of Medical Research (WEHI) | Interactions Hôtes-Pathogènes-Environnements (IHPE) ; Université de Perpignan Via Domitia (UPVD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Genomics and Bioinformatics Core Facility ; University of Notre Dame [Indiana] (UND) | Department of Plant and Environmental Sciences [Copenhagen] ; Faculty of Science [Copenhagen] ; University of Copenhagen = Københavns Universitet (UCPH)-University of Copenhagen = Københavns Universitet (UCPH) | Genome Analysis Unit, National Cancer Institute ; National Institutes of Health [Bethesda, MD, USA] (NIH) | Bowling Green State University (BGSU) | University of Alberta | Department of Biology, Lawrence University ; Lawrence University | Georg-August-University of Göttingen = Georg-August-Universität Göttingen | Institute of Environment, Health & Societies, Environment and Health Theme, Brunel University London ; Brunel University London [Uxbridge] | Department of Biology ; Pennsylvania State University (Penn State) ; Penn State System-Penn State System | Faculteit der Aard- en Levenswetenschappen, Vrije Universiteit ; Vrije Universiteit Amsterdam [Amsterdam] (VU) | The Whitney Laboratory for Marine Bioscience, University of Florida ; University of Florida [Gainesville] (UF) | Molecular Parasitology Laboratory, Kingston University ; Kingston University | Faculty of Science, Health, Education and Engineering (USC) ; University of the Sunshine Coast (USC) | Molecular Parasitology Unit ; Queensland Institute of Medical Research | Pennsylvania State University (Penn State) ; Penn State System | Kenya Medical Research Institute (KEMRI) | Department of Neuroscience (DEPARTMENT OF NEUROSCIENCE) ; University of Pennsylvania | Lawrence Berkeley National Laboratory [Berkeley] (LBNL) | Bioinformatics and Cancer Genomics lab Lorenzo and Pamela Galli ; Melanoma Research Fellow Peter MacCallum Cancer Centre | University of Ottawa [Ottawa] | Institute for Genomics and Bioinformatics [Irvine] ; University of California [Irvine] (UC Irvine) ; University of California (UC)-University of California (UC) | Parasites and Vectors Division, London Centre for Neglected Tropical Disease Research ; Natural History Museum | Department of Biomedical Sciences, Faculty of Science and Technology ; University of Westminster [London] (UOW) | Molecular Parasitology Laboratory, School of Life Sciences Pharmacy and Chemistry ; Kingston University | Sequence characterization of the Biomphalaria glabrata genome was funded by NIH-NHGRI grant HG003079 to R.K.W., McDonnell Genome Institute, Washington University School of Medicine. Biomphalaria glabrata and Schistosoma mansoni were provided to some participating labs by the NIAID Schistosomiasis Resource Center (Biomedical Research Institute, Rockville, MD) through NIH-NIAID Contract HHSN272201000005I for distribution through BEI Resources. C.M.A. and E.S.L. acknowledge NIH grant P30GM110907 from the National Institute of General Medical Sciences (NIGMS). Publication costs were contributed equally by McDonnell Genome Institute, Washington University School of Medicine and the COBRE Center for Evolutionary and Theoretical Immunology (CETI) which is supported by NIH grant P30GM110907 from the National Institute of General Medical Sciences (NIGMS). E.S.L. acknowledges NIH/NIAID ROI AI101438. J.M.B., H.D.A.-G and M.K. acknowledge NIH-NIAID R01-AI0634808. M.Y. acknowledges UK BBSRC (BB/H022597/1). G.O. acknowledges support from FAPEMIG (RED-00014-14, PPM-00189-13) and CNPq (304138/2014-2, 309312/2012-4). R.L.C. acknowledges CNPq (503275/2011-5). T.P.Y. acknowledges NIH/NIAID RO1AI015503. K.F.H. and M.T.S. acknowledge BBSRC (BB/K005448/1). B.G. acknowledges ANR JCJC INVIMORY (ANR-13-JSV7-0009). S.E. acknowledges NIAID contract HHSN272201400029C. J.M.K. acknowledges the Research Council for Earth and Life Sciences (A.L.W.; 819.01.007) and the Netherlands Organization for Scientific Research (NWO). R.M.C. acknowledges NIH GM061738 and support from the American Heart Association, Southwest Affiliate (14GRNT20490250). D.T. acknowledges NIH R25 GM075149. C.F. acknowledges NIH R01-GM077582. D.J.J. acknowledges D.F.G. JA2108/1-2. M.de S.G. acknowledges CNPq 479890/2013-7. K.M.B. and J.P.R. acknowledge NSERC 312221 and CIHR MOP74667. C.S.J., L.R.N., S.J., E.J.R., S.K. and A.E.L. acknowledge NC3R GO900802/1. K.K.B. and K.B.S. acknowledge NSERC 315051 and 6793, respectively. M.B. and C.J.B. acknowledge NIH RO1-AI109134. C.J.B. acknowledges NIH AI016137 and AI111201. B.R. acknowledges NHGRI 4U41HG002371. P.C.H., M.A.G. and E.A.P. acknowledge NSERC 418540. O.L.B. and Ch.C. acknowledge ANR-12-EMMA-0007-01. S.F.C. acknowledges Australian Research Council FT110100990. | We thank S. Newfeld for discussion of actin evolution; N. El Sayed and H. Tettelin for discussion of HSP annotation and expression. We acknowledge access to the Metafer microscopy system at the I. Robinson Research Complex, Harwell, Rutherford Appleton Laboratory, Oxon, UK (BBSRC Professorial Fellowship, grant number BB/H022597/1). | ANR-12-EMMA-0007,AntiOom,Biomolécule à effet anti-oomycète : spécificité, stabilité, optimisation.(2012) | ANR-13-JSV7-0009,INVIMORY,Immunité mémoire chez les invertébrés : spécificité et mécanismes de l'immunité mémoire chez le mollusque Lophotrochozoaire Biomphalaria glabrata.(2013)