Draft-genome sequence data and phylogenomic comparison of two marine-sourced bacterial strains Pseudoalteromonas sp. MIP2626 and Psychrobacter sp. BI730
2020
Kothe, Caroline Isabel | Delbarre-Ladrat, Christine | Renault, Pierre | Passerini, Delphine | MICrobiologie de l'ALImentation au Service de la Santé (MICALIS) ; AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Unité Biotechnologies et Ressources Marines (BRM) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) | This work was supported by “Conselho Nacional de Desenvolvimento Científico e Tecnológico(CNPq)” – Brazil [grant number 202444/2017-1 to C.I.K.], INRAE and Ifremer
International audience
显示更多 [+] 显示较少 [-]英语. Halophilic and psychrophilic marine bacteria are source of interesting bioactive molecules for biotechnology. We report here the whole-genome sequences of two of them, Pseudoalteromonas sp. MIP2626 isolated from tropical peeled shrimps and Psychrobacter sp. BI730 isolated from deep-sea hydrothermal vent. Sequencing of both genomes was performed by Illumina HiSeq platform (2 × 150 pb). De novo assemblies using Spades v3.9 generated 136 contigs for Pseudoalteromonas MIP2626 and 42 contigs for Psychrobacter BI730, representing a genome size of 3.9 Mb and 3.2 Mb, respectively. Phylogenetic based on 16S rRNA gene sequence and phylogenomic analyses were reported to compare the new sequences with Pseudoalteromonas and Psychrobacter representative strains available in the public databases. The genome sequences have been deposited at GenBank under the accession numbers JAATTW000000000 for Pseudoalteromonas sp. MIP2626 and JAATTV000000000 for Psychrobacter sp. BI730.
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