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Generating Stable Cell Line for Producing Recombinant Phospholipase A2 of Honey Bee (Apis mellifera)
2024
Nabian, Sedigheh | Taheri, Mohammad | Alian, Sara | Shahbakhsh, Mahsa | Gerami Sadeghian, Abbas | Asadollahi, Zahra
BACKGROUND Honey bee venom contains complex compounds such as polypeptides, enzymes, and amines. One of the important components of bee venom is the phospholipase A2 enzyme, which is considered an important honey bee venom allergen and is also used to treat some diseases. This enzyme is found in other insects, arachnids, snakes, and mammalian cells, and its function is the hydrolysis of the second ester bond of glycerophospholipids and the release of fatty acids and lysophospholipids. Although transient transfection can produce recombinant proteins, stable cells are more suitable for high-scale production with economic efficiency.OBJECTIVES: The present study created a stable cell line to produce recombinant phospholipase A2 from honey bee (Apis mellifera) venom.METHODS: Plasmid cloning DNA vector containing phospholipase A2 gene was prepared by Macrogen Company. The recombinant plasmid was transferred to Chinese hamster ovary cells by heat shock method, and gene expression was carried out in a HamsF12 culture medium containing neomycin antibiotic. After increasing polyclonal strains containing plasmid, monoclonal clones were selected by limiting dilution. Then, monoclonal clones were propagated, the soup of the selected cells was collected and concentrated, and the protein expression was checked by sodium dodecyl-sulfate polyacrylamide gel electrophoresis test.RESULTS: The results of electrophoresis, which was performed to confirm the expression of the phospholipase A2 gene in the cell soup, showed a band with a molecular weight of 20 kilodaltons, which confirms the creation of a stable cell line for the production of recombinant phospholipase A2 honey bee venom.CONCLUSIONS: After the transient transfection of the plasmid containing this gene, several cells undergo recombination due to having repair mechanisms and putting the desired gene along with the antibiotic resistance gene in their genome. These cells can be selected and propagated by adding antibiotics to the culture medium.
显示更多 [+] 显示较少 [-]Prevalence of Capnocytophaga canimorsus in the Oral Flora of Healthy Dogs
2024
Moradi Shamami, Sahar | Hadian, Mojtaba | Tukmechi, Amir
BACKGROUND: The bacterium Capnocytophaga canimorsus is a relatively newly recognized gram-negative, facultative, slow-growing bacillus that forms part of the normal oral flora of dogs and cats. Considering the pathogenicity of this bacterium in humans, determining its prevalence is very important for public health as well as the health of dog owners.OBJECTIVES: This study aims to investigate the prevalence of Capnocytophaga canimorsus in the normal oral flora of healthy dogs.METHODS: After taking samples from the saliva of 32 healthy dogs without oral, dental or digestive diseases at different ages, breeds, and sexes, they were placed in a test tube containing 10 mL of sterile peptone water with sterile plastic brushes, and immediately sent to the bacteriology laboratory under sterile conditions. The samples were cultured on a chocolate agar medium containing 5 % defibrinated sheep blood. Then, all the samples were kept in a greenhouse for 48 hours at a temperature of 37 °C and under anaerobic conditions. Using a loop, the grown pink colonies were isolated and to confirm the identification of the isolates, polymerase chain reaction (PCR) test was used in three main steps: Gene extraction, PCR reaction, and electrophoresis.RESULTS: Out of 32 saliva samples, four positive cases of Capnocytophaga canimorsus bacteria were identified by PCR diagnostic method.CONCLUSIONS: Given that Capnocytophaga canimorsus bacterium is present in the oral flora of healthy dogs, dog owners should have sufficient and favorable knowledge about this bacterium and related diseases. The PCR method can be used to detect this bacterium.
显示更多 [+] 显示较少 [-]Antibiotic Resistance in Pathogenic Bacteria, the Causative Agents of Bacterial Diseases in Farmed Rainbow Trout (Onchorhynchus mykiss) in Iran
2023
Soltani, Mahdi | Rakhshanimehr, Kambiz | Mirzargar, Seyed Saeed | Zargar, Ashkan | Shohreh, Poulin | Asadi, Sepideh
BACKGROUND: Infectious diseases and microbial antibiotic resistance are the major problems of fish farming industry annually causing remarkable losses. Apart from the economic losses caused by these infections, some of these agents are zoonotic and may be transmitted to humans.OBJECTIVES: This study was aimed to identify the common causative agents of infections in rainbow trout farms and to determine their antibiotic resistance toward some common antibiotics.METHODS: Sampling was performed during a nine-month period between March and December 2021 by visiting and inspecting rainbow trout farms and the affected fish with disease symptoms were obtained from the farmed fish in Mazandaran, Lorestan, Chaharmahal and Bakhtiari and Zanjan provinces. Bacterial culture was undertaken from anterior kidney or spleen organs and the isolated bacterial strains were identified by phenotyping, biochemical and molecular assays. Antibiotic resistance pattern was evaluated by disk diffusion method (DDM) and minimum inhibition concentration against erythromycin, oxytetracycline, florfenicol, enrofloxacin and nitrofurantoin.RESULTS: Seventy-four bacterial isolates of Gram-positive cocci or Gram-negative coccobacilli were isolated. In phenotyping, biochemical and molecular (PCR) assays Lactococcus garvieae (12 isolates, 16.2 %), Aeromonas hydrophila (9 isolates, 12.2 %), Streptococcus iniae (17 isolates, 23 %), Streptococcus agalactiae (20 isolates, 27 %), and Yersinia ruckeri (16 isolates, 21.7 %) were identified. The majority of these isolates were obtained from the fish farms in Mazandaran province. Erythromycin and oxytetracycline with 87.8 % resistance were antibiotics with the highest resistance, while enrofloxacin with 24.3 % resistance revealed the lowest level of resistance. Antibiotic resistance rates for florfenicol and nitrofurantoin were also 43.2 % and 44.4 %, respectively. The highest antibiotic resistance was detected in the bacterial isolates of Lactococcus garvieae, Aeromonas hydrophila, Streptococcus iniae, Streptococcus agalactiae and Yersinia ruckeri, respectively.CONCLUSIONS: This study shows that the spread of streptococcosis, lactococcosis, yersiniasis and Aeromonas septicemia and their frequent treatments has led to an increase in antibiotic resistance, especially against commonly used drugs such as erythromycin and oxytetracycline.
显示更多 [+] 显示较少 [-]Evaluating the Effect of Culture Supernatant of Pseudomonas aeruginosa on Removing the Inhibitory Effect of Heparin in Real-Time PCR Test
2023
Ashrafi, Aysan | Staji, Hamid | Keramati, Keyvan
BACKGROUND: Heparin is a sulfated glycosaminoglycan. Blood is a common source for DNA detection in all kinds of samples, and anticoagulants such as heparin and ethylenediaminetetraacetic acid (EDTA) are used to prevent coagulation. Because heparin has a strong inhibitory effect on polymerase chain reaction (PCR), it is not used in samples that will be tracked by DNA. There are physical, chemical, and enzymatic methods to eliminate the inhibitory effect of heparin on PCR test.OBJECTIVES: First, to compare the intensity of the inhibitory effect of two anticoagulants, heparin, and EDTA, on the Real-Time PCR (qPCR), and then to investigate the impact of the heparinase enzyme present in the medium culture extract of Pseudomonas aeruginosa, on removing the inhibitory effect of heparin during the real-time PCR.METHODS: In the present study, two blood samples containing heparin and EDTA were subjected to a real-time PCR test to check the intensity of the inhibitory effect. Then, the medium culture extract of Pseudomonas aeruginosa was added to the heparinized blood sample infected with Escherichia coli bacteria in two groups with different conditions. In the first group, the DNA in the heparinized blood sample was extracted by the phenol-chloroform isoamyl alcohol method. Then, these samples were incubated with the extract of Pseudomonas aeruginosa bacteria culture medium at different hours, but in the second group, the samples were incubated at different hours before DNA extraction. Also, the DNA concentration in both groups was measured by a Nanodrop device, and finally, all samples were subjected to a real-time PCR test.RESULTS: The results of the research samples showed that although the heparinized blood sample contains more DNA concentration than the EDTA blood sample, it completely prevents genome replication. Also, incubating heparinized blood with Pseudomonas aeruginosa culture medium extract before DNA extraction for more than 24 hours removes the inhibitory effect of heparin during the real-time PCR, even at a lower cycle threshold than the EDTA-containing sample.CONCLUSIONS: The Pseudomonas aeruginosa culture medium extract may enable researchers to use heparinized blood samples for genome amplification and diagnosis without using expensive and limited commercial heparinase enzyme.
显示更多 [+] 显示较少 [-]Evaluating PCR-RFLP Technique in Identifying Genetic Diversity Clostridium perfringens Biotype A
2023
Mosahasankhani, Hamid | Shamsaddini Bafti, Mehrdad | Kazemipour, Nadia | Alimolaei, Mojtaba | Rokhbakhsh-Zamin, Farokh
BACKGROUND: Clostridium perfringens (C. perfringens) is an anaerobic Gram-positive bacillus with spores, whose biotype A is responsible for a variety of diseases, including intestinal inflammation, bloody diarrhea, and gas gangrene, and hemorrhagic bowel syndrome. Genetic variety can explain the bacteria’s phenotypic diversity, geographic distribution, host specificity, pathogenicity, antibiotic resistance, and virulence. A molecular method using the pattern of DNA bands classifies bacteria based on the size of fragments produced by enzymatic digestion of the genome.OBJECTIVES: This study aims to standardize the polymerase chain reaction (PCR)- restriction fragment length polymorphism (RFLP) method in identifying the genetic diversity of C. perfringens biotype A isolates.METHODS: The genomic DNA of the investigated strains was extracted, and the complete sequence of the alpha toxin gene locus was synthesized using specific primers designed by PCR technique. Enzymatic cleavage of the synthesized amplicons was performed with the Mse l restriction enzyme, and the resulting fragments were separated by electrophoresis and analyzed by ImageJ and NTSYSPC software.RESULTS: The findings showed that the alpha toxin gene locus sequence may change and is not conserved. In this research, 4 different patterns were identified based on enzymatic cleavage. Mutations in this locus can lead to diversity in C. perfringens biotype A and the creation of new strains.CONCLUSIONS: The results of this research showed that the alpha toxin gene locus could be considered a DNA molecular marker in C. perfringens, and the PCR-RFLP technique can be used as a tool for typing this bacterium and estimating the phylogenetic relationships through comparative studies of nucleotide sequences.
显示更多 [+] 显示较少 [-]Prevalence of Borrelia burgdorferi in Guard Dogs in Isfahan, Iran
2023
Zarei Chaleshtory, Mitra | Keihani, Payman | Momtaz, Hassan | Hamze Ali Tehrani, Milad | Hosseini, Seyed Reza
BACKGROUND: Lyme disease is caused by a gram-negative spirochete bacterium called “Borrelia burgdorferi” and can be transmitted by the bite of infected ticks to humans and animals. This disease has a global geographic distribution Dogs can be infected by the bite of the Ixodes ricinus tick.OBJECTIVES: This study aims to detect the prevalence of Borrelia burgdorferi in guard dogs in Isfahan, Iran.METHODS: In this study, blood samples were collected from 97 guard dogs with an average age of 3.5 years in Isfahan city and analyzed by the blood smear method and the nested polymerase chain reaction method (molecular study). The data were statistically analyzed in SPSS software (version 24) using Fisher's exact test and chi square.RESULTS: Twelve samples (12.37 %) were found molecularly positive, which were for 10 male dogs (10.30 %) and two female dogs (2.06 %). There was no evidence of the presence of bacteria in the blood smear and hematological changes were not found in complete blood count tests (CBC Test) performed on infected samples. There was a significant difference in the levels of infection between the age groups of 1 to 2 years (P=0.029) and between this age group (1 to 2 years) and the age group >3 years (P=0.032. (There was a significant difference in infection levels between dogs with different gender.CONCLUSIONS: The prevalence of Borrelia burgdorferi in dogs of Isfahan City is relatively high. Due to the ease of transmission of this pathogen between humans and animals, special attention should be paid for its control and timely detection.
显示更多 [+] 显示较少 [-]Design and Molecular Docking Study of Recombinant Chimera Protein HBHA-Omp28 for Developing an Efficient Vaccine Against Salmonella typhimurium
2023
Abolvafaei, Seyedeh Zahra | Shams, Nemat | Forouharmehr, Ali | Jaydari, Amin | Nazifi, Narges
BACKGROUND: Salmonellosis is a dangerous disease that can threaten the health of humans and animals. This disease can lead to economic losses annually; therefore, many studies have been conducted to prevent this disease.OBJECTIVES: The current study aims to design a recombinant chimera protein HBHA-Omp28 as a vaccine against Salmonella typhimurium.METHODS: The nucleotide and amino acid sequences of Omp28 and HBHA proteins were first extracted from the NCBI database. Then, the recombinant chimera of HBHA-Omp28 was bioinformatically assembled using a rigid linker. Epitope prediction of T and B cells, antigenicity, allergenicity, and physicochemical features assessments of HBHA-Omp28 were done using Immune Epitope Database (IEDB), ABCpred, VaxiJen, AllerTOP and ProtParam online servers, respectively. To assess the secondary and tertiary structures, the Self-Optimized Prediction Method with Alignment (SOPMA) and the Iterative Threading ASSEmbly Refinement (I-TASSER) server were used, respectively. Molecular docking between recombinant chimera and TLR4/MD2 receptor was assessed by ClusPro server. Finally, after codon optimization of nucleotide sequence of recombinant chimera to express in Escherichia Coli k-12 strain, the cloning of recombinant chimera in pET21-a (+) vector was examined.RESULTS: The designed recombinant chimera was classified as an antigenic and non-allergenic protein with molecular weight of 34.19 kDa. According to the results of molecular docking study, the HBHA-Omp28 protein was able to bind to TLR4/MD2 receptor using 9 hydrogen bonds. The results of cloning study demonstrated that HBHA-Omp28 successfully cloned into pET21-a (+).CONCLUSIONS: The designed recombinant chimera can be an appropriate vaccine against salmonella bacteria.
显示更多 [+] 显示较少 [-]Effects of Chronic Toxicity of Bensulfuron-Methyl on Hematological and Serum Biochemical Markers and Liver Tissue of Common carp (Cyprinus carpio)
2023
Rahmani Khanghahi, Fatemeh | Omidzahir, Shila | Movahedinia, Abdolali | Akhoundian, Maryam
BACKGROUND Agricultural pesticides can cause environmental pollution and damage to aquatic organisms. Bensulfuron-methyl is a widely used herbicide in agricultural fields, especially rice fields. Despite the solubility of Bensulfuron-methyl in water and its entry into aquatic environments, limited research has been conducted on the toxicity of this herbicide in aquatic organisms.OBJECTIVES: This study aims to investigate the effects of chronic toxicity of Bensulfuron-methyl in common carp (Cyprinus carpio).METHODS: The fish were divided into four groups. Group 1 was considered as a control, and groups 2, 3, and 4 were exposed to 10 %, 20 %, and 30 % of the 96 h lethal concentration 50 of Bensulfuron-methyl equal to 0, 0.162, 0.324 and 0.486 g/L. After 21 days, blood samples, serum levels, and liver tissue of fishes were analyzed.RESULTS: The number of white blood cells increased in groups 2 and 3 (received 0.162 and 0.324 g/L Bensulfuron-methyl) compared to group 1, while a significant decrease was observed in group 4 (received 0.486 g/L Bensulfuron-methyl) compared to other groups. The number of red blood cells, the amount of hemoglobin, and the percentage of hematocrit in groups 3 and 4 showed a significant decrease compared to other groups, and the values of mean corpuscular volume, mean corpuscular hemoglobin, and mean corpuscular hemoglobin concentration were not significantly different in any groups. The amount of total serum protein in groups 3 and 4 decreased significantly compared to the control group. Serum glucose showed a significant increase in groups 3 and 4 compared to other groups. The values for aspartate aminotransferase, alanine transaminase, and alkaline phosphatase enzymes showed an increasing trend with the increase of Bensulfuron-methyl concentration. The most liver tissue damage was observed in group 4, which included hyperemia, hepatocyte vacuolar degeneration, edematous cell infiltration, bile duct hyperplasia, and hepatic necrosis.CONCLUSIONS: The increase in the concentration of Bensulfuron-methyl can cause liver tissue damage and changes in hematological and serum biochemical markers in common carp.
显示更多 [+] 显示较少 [-]Evaluation of the Efficiency of Polyclonal Antiserum Against the Conserved Motif of Influenza Virus Hemagglutinin in the Detection of Homologous and Heterologous Viruses
2023
Heidariyan, Vida | Karimi, Vahid | Shahsavandi, Shahla | Ghodsian, Naser
BACKGROUND: The H9N2 avian influenza is one of the most important viral diseases of poultry in Asian countries. Continuous mutations in the hemagglutinin (HA) protein as the main viral antigen make interpreting the HA-based serology test results difficult.OBJECTIVES: In this experimental study, the ability of polyclonal antibodies against the conserved motif of HA protein in detecting heterologous H9N2 isolates was evaluated.METHODS: Based on the bioinformatics data, a conserved motif of HA protein was selected and expressed in the pET-28a(+) vector. The recombinant peptide was mixed with an oil adjuvant and injected into specified pathogen free (SPF) chickens to produce the polyclonal antiserum. Similarly, antiserum from the inactivated virus was prepared. The efficiency of the prepared antisera was evaluated in the cross hemagglutination inhibition (HI) test using the homologous and heterologous H9N2 viruses.RESULTS: The average titer of HI antibody against homologous and heterologous viruses using the polyclonal antiserum was equal to five. This titer was estimated to be seven for the homologous virus and much lower for heterologous viruses with inactivated virus antiserum. The difference was statistically significant.CONCLUSIONS: According to the evaluations, this antiserum has a suitable efficiency in identifying different isolates of the H9N2 virus, and compared to the usual antiserum, it detects different antigens of a subtype more accurately. The resulting polyclonal antiserum does not contain non-specific inhibitors, which may cause problems interpreting serological findings. The results showed that polyclonal antiserum could identify H9N2 viruses isolated in different years by HI test; however, its validation requires testing with more viruses.
显示更多 [+] 显示较少 [-]Evaluation of Ostrich and Camel Sera as Alternatives to Commercial Fetal Bovine Serum in Axenic Culture of Leishmania tropica and Leishmania major Promastgotes
2022
Babaei, Zahra | Asadi, Arash | Sharifi, Iraj | Borhani, Mehdi | Ahmadi, Amin | Kayhani, Alireza | Afgar, Ali
BACKGROUND: RPMI 1640 is one of the most widely used culture media for the growth of microorganisms such as Leishmania, which is typically enriched with 10-30 % of fetal bovine serum (FBS) or calf serum (FCS) due to having growth factors such as micronutrients, trace elements, and hormones.OBJECTIVES: As a result of limitations such as the high cost of commercial sera and the recent propagation of ostrich and camel breeding in our country as well as the possibility of obtaining their sera comprising growth factors similar to FBS or FCS, we decided to compare different percentages of these sera with FBS regarding the growth of two Leishmania species.METHODS: 1×106/mL of Leishmania major and Leishmania tropica were cultured in RPMI 1640 in the presence of different percentages of 2.5-30 % related to all three sera; they were then counted, compared, and analyzed on different days up to the fourteenth day.RESULTS: The highest proliferation of both Leishmania species was observed in the presence of all percentages of FBS up to day 7. In media enriched with less than 5 % of both ostrich and camel sera, the growth of the two species of Leishmania was favorable; however,with the increase in the amount of these sera, the proliferation of both species decreased. While only 10 % of sera was compared, the highest growth of L. major and L. tropica was observed in the presence of FBS followed by camel serum.CONCLUSIONS: For 5 % and less concentrations, each ostrich and camel sera and for 10 %, only camel serum are recommended as substitutes for FBS in RPMI 1640 concerning the cultivation of L. major and L. tropicafor a week of incubation;if more than 15 percent is required, FBS is still the best option.
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