Identification of microorganisms, including bacteria, are widely used especially in environmental studies, biotechnology, clinical microbiology, microbial forensics, and in research study. The conventional method of bacteria identification is based on phenotypic observation techniques by profiling an organism’s metabolic attributes or some aspect of its chemical composition. Then, interpretation of test results involves substantial subjective judgement. Currently, general 16S rRNA sequencing and specific PCR play an important role in the accurate and faster identification of bacteria. The aim of this study is to compare the identification of the genus or species of bacteria from agricultural waste using conventional microbiology biochemical test and molecular techniques PCR 16S rRNA universal amplified ribosomal region (UARR) sequencing. A total of 72 agricultural waste samples and 2 ATCC culture as positive control were tested. Out of two ATCC bacteria and fifteen bacteria isolates identified by the biochemical test, twelve species (71%) of bacteria gave exactly the same bacteria genus as the 16S rRNA sequencing results. Aeromonas hydrophilia, Alcaligenes faecalis and Acinetobacter calcoaceticus was revealed as Pseudomonas sp. from the sequencing results. As for Alcaligenes sp., the results from the sequencing is Stenotrophomonas maltophilia. Previous reports also showed different results of the same isolate which were from similar classification, and closely related to each other. The limited number of biochemical tests available in a laboratory will contribute to misidentification of a proposed specie.

We studied the frequency and timing of abortion and the serum levels of 17β-estradiol and progesterone in Korean native cows fed pine needles during pregnancy. Fifteen pregnant cows were randomly assigned to groups of 5. The control group was fed a concentrate and rice straw, and the other 2 groups were fed, in addition, either 1.3 or 2.7 kg (dry weight) of Korean pine needles daily, starting at an average of 91 d of gestation and continuing until 245 d of gestation. The health status of the dams and the viability of the fetuses were ascertained by rectal palpation and ultrasound scanning during pregnancy. Simultaneously, blood samples were collected for analysis of serum 17β-estradiol and progesterone. Two abortions in mid-pregnancy (at 126 and 150 d of gestation) occurred in the group ingesting the higher daily amount of pine needles. Premature parturition occurred at 259 d of gestation in this group and at 241 and 252 d of gestation in the group ingesting the lower daily amount of pine needles. The serum 17β-estradiol concentration was significantly higher (P < 0.05) at 4 mo of gestation and the serum progesterone level significantly lower (P < 0.05) at 8 mo of gestation in the group ingesting more pine needles daily than in either of the other 2 groups. These results suggest that the ingestion of pine needles may play a role in abortion in Korean native cows by increasing the serum 17β-estradiol concentration and decreasing the serum progesterone concentration.

Rice straw and oil palm empty fruit bunch were treated with urea&#xD;and commercial effective microorganisms to study their ability to breakdown fibres, improved in protein and energy values. In rice straw, the crude protein and crude fibre treated with urea and urea + effective microorganisms showed significant differences from the untreated control. The neutral detergent fibre and nitrogen free&#xD;extract values in the rice straw treatment did not show significant differences. Metabolizable energy values decreased with the treatment groups compared to the control. The results of keeping the treated rice straw in anaerobic plastic bags up to 30 days showed no significant breakdown of fibre components in the control and urea&#xD;treated groups. But there is a significant dropped in the neutral detergent fibre in urea + effective microorganisms treatment.&#xD;In oil palm empty fruit bunch, there were no significant differences seen in the crude protein, crude fibre, acid detergent fibre, neutral detergent fibre, nitrogen free extract and metabolisable energy values. Storage showed decreased in energy values in all treated groups. The addition of urea and microbes showed improved protein level and in the reduction of the fibre components in rice straw only. Keywords: rice straw, oil palm empty fruit bunch, urea, effective microorganisms, crude fibre, acid detergent fibre, neutral&#xD;detergent fibre, metabolisable energy.

Objective: This research was arranged to explore the effect of supplementation of a combination of Lactobacillus plantarum and Saccharomyces cerevisiae as a new probiotic in fermented rice straw-based rations on in vitro digestibility and ruminal characteristics. Materials and Methods: A randomized group design with 3 types of treatment and 4 replications as a group was used in this study. A probiotic inoculum containing L. plantarum and S. cerevisiae with 1 × 1010 colony-forming unit (CFU)/ml. Treatments were followed by: P1 = complete rations without probiotics (control), P2 = P1 supplemented 0.5% probiotics, and P3 = P1 supplemented 1% probiotics. Substrate complete rations were based on the fermented rice straw and concen¬trate (60%:40%). Parameters of digestibility and rumen fermentation products were determined after 48 h of incubation. Results: Probiotics supplemented with fermented rice straw-based rations significantly increased (p &lt; 0.05) digestibility and rumen characteristics in vitro. Supplementation with 1% probiotics (P3) produces the highest digestibility compared to other treatments: in-vitro dry matter digestibil¬ity (IVDMD) (55%), in-vitro organic matter digestibility (IVOMD) (58.28%), in-vitro crude protein digestibility (IVCPD) (84.42%), in-vitro acid detergent fiber digestibility (IVADFD) (53.99%), in-vitro neutral detergent fiber digestibility (IVNDFD) (58.39%), and in-vitro cellulose digestibility (IVCLD) (67.12%). Rumen pH (6.76–6.80) did not change significantly (p &gt; 0.05) due to supplemented probiotics. Probiotic supplementation in rations significantly (p &lt; 0.05) increased the content of NH3 and total volatile fatty acid (VFA). Supplementation with 1% probiotic (P3) showed the highest concentration of NH3 (26.56 mg/100 ml) and was also followed by the total VFA (115.75 mM) compared to the control (22.59 mg/100 ml and 103.00 mM, respectively). Conclusion: Supplementation of 1% probiotics (combination of L. plantarum and S. cerevisiae) containing 1 × 1010 CFU/ml in fermented rice straw-based rations increases nutrient digestibility, that is, IVDMD, IVOMD, IVCPD, IVADFD, IVNDFD, and IVCLD, and also increases rumen fermenta¬tion, which is the concentration of NH3 and total VFA. [J Adv Vet Anim Res 2023; 10(1.000): 96-102]