The composition of root exudates is modulated by several environmental factors, and it remains unclear how that affects beneficial rhizosphere or inoculated microorganisms under heavy metal (HM) contamination. Therefore, we evaluated the transcriptional response of Pseudomonas putida E36 (a Miscanthus x giganteus isolate with plant growth promotion-related properties) to Cd, Pb and Zn in an in vitro study implementing root exudates from M. x giganteus. To collect root exudates and analyse their composition plants were grown in a pot experiment under HM and control conditions. Our results indicated higher exudation rate for plants challenged with HM. Further, out of 29 organic acids identified and quantified in the root exudates, 8 of them were significantly influenced by HM (e.g., salicylic and terephthalic acid). The transcriptional response of P. putida E36 was significantly affected by the HM addition to the growth medium, increasing the expression of several efflux pumps and stress response-related functional units. The additional supplementation of the growth medium with root exudates from HM-challenged plants resulted in a downregulation of 29% of the functional units upregulated in P. putida E36 as a result of HM addition to the growth medium. Surprisingly, root exudates + HM downregulated the expression of P. putida E36 functional units related to plant colonization (e.g., chemotaxis, motility, biofilm formation) but upregulated its antibiotic and biocide resistance compared to the control treatment without HM. Our findings suggest that HM-induced changes in root exudation pattern may attract beneficial bacteria that are in turn awarded with organic nutrients, helping them cope with HM stress. However, it might affect the ability of these bacteria to colonize plants growing in HM polluted areas. Those findings may offer an insight for future in vivo studies contributing to improvements in phytoremediation measures.

Salinity stress affects aquatic microalgal growth and their physiological responses have been studied extensively. However, arsenic (As) accumulation and biotransformation by freshwater phytoplankton under a salinity gradient have never been addressed. This study reports a distinctive pattern of As uptake, accumulation, and biotransformation by four axenic freshwater phytoplankton species, i.e., Scenedesmus acutus, Closterium aciculare, Staurastrum paradoxum, and Pediastrum duplex. Phytoplankton cells were incubated in sterilised C medium modified with varying salinity levels (0–5‰) in association with arsenate and phosphate concentrations. The biotransformation of arsenate (i.e., As(V)) to arsenite (As(III)) and to further methylated species decreased with increasing salinity in the culture medium whereas As accumulation increased. Among the four strains, only S. acutus and S. paradoxum converted As(V) to As(III), with no detected methylated species. In contrast, C. aciculare and P. duplex biotransformed As(V) to As(III) and further to methyl arsenic species, such as DMAA. S. acutus and S. paradoxum exhibited higher accumulation tendency than the other two species. S. paradoxum showed the lowest As reduction rate (i.e., As(V) to As(III)) compared to other species, although, without significant variations. The morphological changes were observed in phytoplankton cells in response to increased salinity stress. Moreover, As(V) concentrations in the culture medium significantly decreased by day 7–14. Thus, this study presents a conceptual model of the As biotransformation pattern by axenic freshwater phytoplankton.

A complex relationship exists between copper stress and the accumulation and release of domoic acid (DA) in toxin-producing Pseudo-nitzschia cells. To clarify the changes and role of DA in this process, we exposed the toxin-producing P. multiseries and the non-toxin-producing P. pungens to copper stress (5 and 9 μM) for 96 h. Results showed that P. multiseries grew better than P. pungens under the two aforementioned copper concentrations. DA content in the cells of P. multiseries increased with increased copper stress, and the dissolved DA in the medium under the 9 μM copper treatment increased. DA addition at a 9 μM copper concentration reduced the copper content in P. multiseries cells and cell walls, but did not change the free copper ion content in culture medium. Adding DA to the medium reduced the malondialdehyde (MDA) content in the cells of P. multiseries under copper stress, DA addition also reduced the activities of catalase (CAT) and superoxide dismutase (SOD) at 5 μM Cu, and the activity of peroxidase (POD) at 9 μM Cu. This suggests that DA may not alleviate copper stress by improving the antioxidant defense system of algal cells, nor can it be complexed with copper ions in the medium to alleviate copper stress. Furthermore, the reactive oxygen species (ROS) scavenger N-tert-butyl-α-phenylnitrone (BPN) was used to study the DA accumulated in cells. The BPN addition significantly reduced the accumulation of DA in the cells under copper stress, suggesting that DA content in cells was closely related to ROS. Moreover, further experiments demonstrated that DA addition can improve the growth of P. multiseries under hydrogen peroxide stress. Our results indicate that DA alleviates P. multiseries oxidative damage when expose to copper stress.

The present study was aimed at investigating the effects of different acids and pH neutralizers applied to dredged marine sediment for the treatment of heavy metals, and the resulting influence on the sediment quality as a plant growth medium. The inspection of barley germination in the dredged marine sediment revealed that residual salts are critical plant stressors whose adverse effects exceed those exhibited by high-level heavy metals and petroleum hydrocarbons present in the sediment. Acid washing and pH neutralization reduced not only the heavy metal contents but also the sediment salinity (by factors of 6.1–9.5), resulting in 100% germination of barley. For acid-washed and calcium-oxide-neutralized sediment, the barley growth was comparable to that observed in untreated and water washed sediment despite factors of 5.2–8.0 greater sediment salinity in the former. This result represents the protective effect of residual calcium against sodium and chloride toxicity. Water washing of acid-washed and pH-neutralized sediments further enhanced barley growth owing to the reduction in osmotic pressure. This study showed the effect of different sediment-washing reagents on the product quality. It also indicated the significance of balancing the enhancement of product quality and economic cost of further treatment requirements.

The objectives of this research are: identify the hydrocarbons in water from the Bitzal River, Tabasco; select a carbon source that serves as a representative substrate of the determined compounds; and finally, design an experimental proposal for bioreactors that are capable of consuming compounds formed by complex mixtures and, therefore be effective in the elimination of specific hydrocarbons. We identified 16 compounds that belong to different hydrocarbon fractions. Pentacene (24.3 ± 0.09 mg L⁻¹), n-nonane (2.11 ± 0.96 mg L⁻¹) and benzo [a] pyrene (1.39 ± 0.57 mg L⁻¹) were the compounds with the highest concentrations in water. Two culture media, mineral medium and seawater were used. Diesel and Mayan crude oil were used for each culture medium, with a total of four bioreactors. Diesel represented light- and medium-fraction hydrocarbons, while Mayan crude oil represented the heavy fraction as well as the recalcitrant and polycyclic aromatic hydrocarbons (PAH). The maximum growth of suspended solids for diesel in mineral medium reached 2.95 g L⁻¹, and diesel was completely consumed in 8 days. In seawater, suspended solids for diesel reached 2.70 g L⁻¹, and diesel was consumed in 12 days. For Mayan crude oil in mineral medium, suspended solids increased from 0.8 to 2.41 g L⁻¹, and Mayan crude oil was completely consumed in 12 days. Using seawater, Mayan crude oil also degraded in 12 days, and suspended solids growth reached 2.11 g L⁻¹. Compounds that simulate complex mixtures of hydrocarbons from light to heavy fractions could be degraded, and the use of bioreactors is an alternative method of hydrocarbon pollution remediation in the Bitzal River.

One of the most persistent pharmaceutical compounds commonly found in treated wastewater is lamotrigine (LTG). It has also been detected in soils and crops irrigated with treated wastewater. Here we focused on the ability of the white-rot edible mushroom Pleurotus ostreatus to remove and transform LTG in liquid cultures. At concentrations of environmental relevance (1 and 10 μg L−1) LTG was almost completely removed from the culture medium within 20 days. To elucidate the mechanism of LTG removal and transformation, we applied a physiological-based approach using inhibitors and a competing agent. These experiments were conducted at a higher concentration for metabolites detection. Based on identification of sulfur-containing metabolites and LTG N2-oxide and the effect of specific inhibitors, cytochrome P450 oxidation is suggested as one of the reaction mechanisms leading to LTG transformation. The variety and number of transformation products (i.e., conjugates) found in the current study were larger than reported in mammals. Moreover, known conjugates with glucuronide, glutathione, or cysteine/glycine, were not found in our system. Since the majority of the identified transformation products were conjugates of LTG, this study highlights the persistence of LTG as an organic pollutant in ecosystems exposed to wastewater.

Studies on Fe uptake by phytoplankton have been often conducted using artificial culture media. However, Fe chemistry in freshwater can be influenced by riverine anthropogenic impacts and other factors causing water quality changes. In this study, therefore, Fe uptake in natural (river and reservoir) and effluent waters was investigated for the notorious bloom-forming freshwater cyanobacterium Microcystis aeruginosa. To investigate the Fe uptake mechanism, a short-term incubational assay was conducted in the presence of light, Fe(II) ligand and Fe(III) reductant, with results consistently indicating that unchelated Fe(III) is the major substrate for Fe uptake by M. aeruginosa. Further assays using various freshwater samples indicated that Fe uptake is lower in natural waters compared to that of effluent waters and, interestingly, Fe uptake was found to be limited in natural waters. These results suggest that Fe limitation can be alleviated by the inflow of effluent waters. Statistical analysis with various water quality variables indicated that Fe availability is significantly influenced by concentrations of dissolved Fe and organic matter as well as specific UV absorbance (an index of aromaticity). Overall, findings of this study highlight that watershed anthropogenic activities exert important roles in Fe uptake by freshwater cyanobacteria via alteration of Fe speciation.

The phenylurea herbicide, linuron (LIN), is used to control various types of weeds. Despite its efficient role in controlling weeds, it presents a persistent problem to the environment. In the current study, phytoremediation properties of transgenic CYP1A2 Arabidopsis thaliana plants to LIN were assessed. CYP1A2 gene was firstly cloned and expressed in bacteria before proceeding to plants. In presence of LIN, The growth of CYP1A2 expressing bacteria was superior compared to control bacteria transformed with the empty bacterial expression vector pET22b(+). No clear morphological changes were detected on CYP1A2 transgenic plants. However, significant resistance to LIN herbicide application either via spraying the foliar parts of the plant or via supplementation of the herbicide in the growth medium was observed for CYP1A2 transformants. Plant growth assays under LIN stress provide strong evidence for the enhanced capacity of transgenic lines to grow and to tolerate high concentrations of LIN compared to control plants. HPLC analyses showed that detoxification of LIN by bacterial extracts and/or transgenic plant leaves is improved as compared to the corresponding controls. Our data indicate that over expression of the human CYP1A2 gene increases the phytoremediation capacity and tolerance of Arabidopsis thaliana plants to the phenylurea herbicide linuron.