Sediment and polyethylene sampler-based estimates of polychlorinated dibenzo-p-dioxin/dibenzofuran (PCDD/F) concentrations in Newark Bay, New Jersey (USA) benthic biota were compared. Biota concentrations based on sediment were estimated using an organic carbon (OC)-water partitioning model and an OC and black carbon (BC)-water dual model. Biota concentrations based on polyethylene were estimated from samplers deployed in the Newark Bay water column and samplers immersed in a sediment/porewater slurry in the laboratory. Porewater samplers provided the best estimates of biota concentrations (within 3.1×), with best results achieved for deposit-feeders (within 1.6×). Polyethylene deployed in deep water also provided good estimates of biota concentrations (within 4×). By contrast, OC-water partitioning overestimated biota concentrations by up to 7×, while OC and BC combined underestimated biota concentrations by up to 13×. We recommend passive samplers such as polyethylene for estimating concentrations of hydrophobic organic contaminants in field biota given its simplicity and relatively lower uncertainty compared to sediment equilibrium partitioning.

Rhizosphere soil and dominant plant samples were collected at a brownfield site in New Jersey, USA, during summer 2005 to evaluate plant metal uptake from the contaminated soils. Metal concentrations varied from 4.25 to 978 μg g⁻¹ for As, 9.68–209 μg g⁻¹ for Cr, 23.9–1870 μg g⁻¹ for Cu, and 24.8–6502 μg g⁻¹ for Zn. A wide range of metal uptake efficiencies in the roots, stems and leaves was found in this study. Data showed that (1) Betula populifolia has high Zn, Cu and As accumulations in the root, and high concentrations of Cu and Zn in the stem and the leaf; (2) Rhus copallinum has high accumulation of Zn and Cr in the leaf and Cu in the stem; (3) Polygonum cuspidatum has high accumulations of Cu and As in the root; and (4) Artemisia vulgaris shows high Cu accumulation in the leaf and the stem.

Blue crabs from a contaminated estuary (Hackensack Meadowlands-HM) and a cleaner reference site (Tuckerton-TK) were analyzed for Cr, Cu, Hg, Pb, and Zn in muscle and hepatopancreas. Crabs from each site were taken into the laboratory and fed food from the other site, or in another experiment, transplanted to the other site for eight weeks. All crabs were analyzed for metals. Overall, tissue concentrations reflected environmental conditions. Tissue differences were found for Cu, Pb and Zn (all higher in hepatopancreas), and Hg (higher in muscle). HM muscle had more Hg than TK muscle, but did not decrease after transplanting or consuming clean food. HM crabs lost Cu, Pb and Zn in hepatopancreas after being fed clean food or transplanted. TK crabs increased Hg in muscle and Cr and Zn in hepatopancreas after transplantation or being fed contaminated (HM) food. Concentrations were variable, suggesting that blue crabs may not be fully reliable bioindicators of polluted systems. The accumulation of metals within the muscle and hepatopancreas of blue crabs was highly variable, but often followed environmental concentrations.

Organohalogen pollutants are of concern in many river and estuarine environments, such as the New York-New Jersey Harbor estuary and its tributaries. The Hackensack River is contaminated with various metals, hydrocarbons and halogenated organics, including polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins. In order to examine the potential for microbial reductive dechlorination by indigenous microorganisms, sediment samples were collected from five different estuarine locations along the Hackensack River. Hexachlorobenzene (HCB), hexabromobenzene (HBB), and pentachloroaniline (PCA) were selected as model organohalogen pollutants to assess anaerobic dehalogenating potential. Dechlorinating activity of HCB and PCA was observed in sediment microcosms for all sampling sites. HCB was dechlorinated via pentachlorobenzene (PeCB) and trichlorobenzene (TriCB) to dichlorobenzene (DCB). PCA was dechlorinated via tetrachloroaniline (TeCA), trichloroanilines (TriCA), and dichloroanilines (DCA) to monochloroaniline (MCA). No HBB debromination was observed over 12 months of incubation. However, with HCB as a co-substrate slow HBB debromination was observed with production of tetrabromobenzene (TeBB) and tribromobenzene (TriBB). Chloroflexi specific 16S rRNA gene PCR-DGGE followed by sequence analysis detected Dehalococcoides species in sediments of the freshwater location, but not in the estuarine site. Analysis targeting 12 putative reductive dehalogenase (rdh) genes showed that these were enriched concomitant with HCB or PCA dechlorination in freshwater sediment microcosms.

Polychlorinated biphenyls (PCBs) were measured in the air and water over the Hudson River Estuary during six intensive field campaigns from December 1999 to April 2001. Over-water gas-phase PCB concentrations averaged 1100 pg/m3 and varied with temperature. Dissolved-phase PCB concentrations averaged 1100 pg/L and displayed no seasonal trend. Uncertainty analysis of the results suggests that PCBs with 5 or fewer chlorines exhibited net volatilization. The direction of net air/water exchange could not be determined for PCBs with 6 or more chlorines. Instantaneous net fluxes of PCBs ranged from +0.2 to +630 ng m-2 d-1. Annual fluxes of [summation operator]PCBs were predicted from modeled gas-phase concentrations, measured dissolved-phase concentrations, daily surface water temperatures and wind speeds. The net volatilization flux was +62 μg m-2 yr-1, corresponding to an annual loss of +28 kg/yr of PCBs from the Hudson River Estuary for the year of 2000. Investigation of the air-water exchange of PCBs in the Hudson River Estuary suggests that PCBs with 5 or fewer chlorines undergo net volatilization.

The impact of ghost fishing in large coastal ecosystems has generated considerable interest. In smaller, understudied systems with fewer stakeholders, derelict fishing gear (DFGs) may have impacts similar to these larger systems at the same relative scale. Four years of side scan sonar surveys in the Mullica River-Great Bay Estuary (New Jersey, USA) supported the recovery of 1776 DFGs off-season by commercial partners. Locations with high densities of recovered DFGs (>200 DFGs/km²) occupied intersections of recreational vessel traffic and commercial crabbing activity. Condition and depth-in-sediment of recovered DFGs was used to evaluate true bycatch (terrapins, whelks, blue crabs) versus species utilizing degraded gear as habitat (juvenile tautog, oyster toadfish). Critically, gear recovered in-season with low cost sonars (an additional 225 DFGs) prevented the accumulation of new DFGs which likely generate the highest percentages of bycatch. Removal of DFGs in this system led to significant ecological (reduced bycatch), economic (>$61,000 in direct pay, reused gear), and anticipated future benefits (increased harvest).

Hurricane Sandy made landfall in Barnegat Bay, October, 29, 2012, damaging shorelines and infrastructure. Estuarine sediment chemistry and toxicity were investigated before and after to evaluate potential environmental health impacts and to establish post-event baseline sediment-quality conditions. Trace element concentrations increased throughout Barnegat Bay up to two orders of magnitude, especially north of Barnegat Inlet, consistent with northward redistribution of silt. Loss of organic compounds, clay, and organic carbon is consistent with sediment winnowing and transport through the inlets and sediment transport modeling results. The number of sites exceeding sediment quality guidance levels for trace elements tripled post-Sandy. Sediment toxicity post-Sandy was mostly unaffected relative to pre-Sandy conditions, but at the site with the greatest relative increase for trace elements, survival rate of the test amphipod decreased (indicating degradation). This study would not have been possible without comprehensive baseline data enabling the evaluation of storm-derived changes in sediment quality.

Spatial trends of polybrominated diphenyl ether (PBDE) congeners were examined by using high resolution gas chromatography – low resolution electron impact mass spectrometry (GC-EIMS) in 414 samples of young-of-the-year (YOY) bluefish (Pomatomus saltatrix) collected from a total of 29 nursery habitats along the US Atlantic coastline from Massachusetts to Florida. Of the 26 target PBDE congeners, BDE-47 (4 Br), BDE-100 (5 Br), BDE-49 (4 Br), BDE-99 (5 Br), and BDE-154 (6 Br) were the five most frequently detected congeners in the order of decreasing importance. The sum of the concentrations of five major PBDE congeners, referred to as ΣPBDEs, varied between estuaries and also among samples from a given estuary. ΣPBDEs were lowest in YOY bluefish from Vineyard Sound, Nantucket Sound, Great Bay, Delaware Bay, Lynnhaven Bay, Cape Lookout, and Crescent Beach, with maximum ΣPBDE concentrations below 10ng/g wet weight. ΣPBDEs in three bluefish samples from Stamford Harbor were detected at relatively high to unusually high concentrations of 69.1, 205, and 561ng/g wet weight. ΣPBDE values for other Stamford Harbor bluefish were generally low. Highest PBDE concentrations were detected in the vicinity of industrial and urban locations within the New York – New Jersey metropolitan complex. Among them, bluefish from Newark Bay were generally the most contaminated with an average ΣPBDE value of 56.6±30.8ng/g wet weight. ΣPBDEs in bluefish from Newark Bay were numerically greater than ΣPBDEs in bluefish from all locations, however these differences were not statistically significant. Modest to good correlations between ΣPBDEs and lipids were observed for YOY bluefish from Buzzards Bay, Upper New Bedford Harbor, Lower New Bedford Harbor, Outer New Bedford Harbor, Providence Harbor, Housatonic River, Norwalk Harbor, Little Neck Bay, Newark Bay, Sandy Hook Bay, Great Bay, Delaware Bay, Patuxent River and Crescent Beach. Poor correlations between ΣPBDE and lipids were observed for bluefish from other estuaries. ΣPBDEs were not always correlated with fish length or weight. ΣPBDEs in YOY bluefish along the US Atlantic coastline modestly paralleled ΣPBDEs in mussels and oysters, from not exact but geographically loosely similar locations, reported in the NOAA Mussel Watch Program. A number of researchers who used the high resolution mass spectrometry reported additional PBDE congeners. Although PBDE congeners we report do appear to be the prominent congeners in these studies, it is likely that the comparisons will be skewed in certain instances.

Atlantic coastal bays of the US are essential habitat for young of year bluefish (Pomatomus saltatrix). Their residence in these estuaries during critical life stages, high lipid content, and piscivory make bluefish an ideal bioindicator species for evaluating estuarine health. Individual whole fish from four estuaries impacted by Hurricane Sandy were collected in August 2013, analyzed for a suite of persistent organic pollutants (POPs) including polychlorinated biphenyls, polybrominated diphenyl ethers and organochlorine pesticides and evaluated using health metrics. Concentrations in whole bluefish differed by estuary; however, concentrations for many POPs decreased or were similar to those observed prior to the hurricane. Prevalence of the ectoparasitic gill isopod (Lironeca ovalis) varied by estuary and no relationships between contaminants and lesions were observed. Bluefish should be considered for monitoring programs and, if sampled frequently, could be an effective bioindicator of incremental and episodic changes in contaminants within aquatic food webs.

Real time quantitative Polymerase Chain Reaction (qPCR) was used at four marine bathing beaches in New Jersey as part of a demonstration project to evaluate the potential for use of qPCR as part of a routine beach monitoring program. Split sample analyses for Enterococcus spp. using membrane filtration (MF) and qPCR were performed for 11weeks during the summer of 2011 using swimming advisories based on qPCR results. Comparison of qPCR and MF results from split samples indicated that there was an 82% overall agreement rate between the two methods. Results from the qPCR tests were available by noon the same day of sample collection and swimming advisories were posted on a dedicated website. The qPCR method can be more labor intensive and requires a higher level of training to perform, however, qPCR was able to assess beach water quality in a timelier manner compared to conventional MF techniques.