This paper presents the results of investigation on photosynthetic pigments, chlorophyll a in the river Danube (Serbia) during 2002-2005. Field investigations were carried out with seasonal dynamics on the river strech between 1112 and 851 km. Exceptionally in September, during low water period, investigations were carried out on the river strech between km 1260 - 851, including the main tributaries: Tisza, Sava, Velika Morava and Pek. The concentrations of chlorophyll a and phaeophytin a were determined using the standard ISO 10260/92 methodology, variant B. Pigment extraction was done in hot ethanol immediately after sampling, on board of a research ship. The results revealed seasonal concentration dynamics of the mentioned indicators of primary productivity and physiological status of the algae community where fall of chlorophyll a from the upstream towards downstream profiles was evidenced.

Phytoplankton composition of the Hydrosystem Danube-Tisza-Danube (HS DTD) and isolated peaks of chlorophyll a in summer months of 2003 and 2004 revealed moderate ecological potential in Banat and Backa region (Serbia). Investigated HS DTD water pointed out to a slighty better ecological potential in 2004.

During 2005 the referent monitoring of the chemical quality of surface waters and sediments in Vojvodina was conducted as a supplement to the regular monitoring program in Vojvodina. It is concluded that the water quality mainly satisfies the criteria of the 1st/2nd class acccording to our legislation, but regarding the more stringent Canadian and Dutch water quality standards content of some micropollutants may be considered as potentially problematic. Sediment quality is mainly satisfying, with the exceptions of the DTD canal Vrbas-Bezdan monitoring station after Srbobran, which showed a slight contamination with PAHs, and the Sava-Sabac monitoring station, as the target values according to Dutch legislation were exceeded for DDT and its metabolites.

There are some water reservoirs on the territory of Zajecar district area (Serbia). Their purpose and time of building are very different. It is also different the organic matter production in those reservoirs. Water reservoirs for supplying with drinking water are very specific because the increased of organic products makes some difficulties in process of refinement reservoir water to drinking water. In this paper we are trying to explain, taking the reservoir Grliste for the example, if the biomanipulation exerts on water quality in the reservoirs.