Spatial distributions and temporal variations of trace metals in Korean coastal sediments were investigated by determining seven metals (As, Cd, Cr, Cu, Hg, Pb, and Zn) in sediment collected from 71 stations between 2004 and 2010 (n=491). High metal concentrations were found in the southeastern coast, where there are many cities and industrial complexes, indicating that metal concentrations in Korean coastal sediment are significantly influenced by human activities associated with urbanization and industrialization. However, metal concentrations in sediment did not markedly vary temporally, which was because the coast is managed sustainably and because of the characteristics of the sediment environments. Based on the sediment quality guidelines and geoaccumulation index, Korean coastal sediments are practically unpolluted with Cd, Cr, Cu, Hg, Pb and Zn but moderately polluted with As. More intensive monitoring is required to determine the potential As sources and to understand the As geochemical cycles in Korean coastal sediments.

Plastic is a common item in marine environments. Studies assessing seabird ingestion of plastics have focused on species that ingest plastics mistaken for prey items. Few studies have examined a scavenger and predatory species that are likely to ingest plastics indirectly through their prey items, such as the great skua (Stercorarius skua). We examined 1034 regurgitated pellets from a great skua colony in the Faroe Islands for plastics and found approximately 6% contained plastics. Pellets containing remains of Northern fulmars (Fulmarus glacialis) had the highest prevalence of plastic. Our findings support previous work showing that Northern fulmars have higher loads of plastics than other sympatric species. This study demonstrates that marine plastic debris is transferred from surface feeding seabird species to predatory great skuas. Examination of plastic ingestion in species that do not ingest plastics directly can provide insights into how plastic particles transfer vertically within the food web.

Illumina-based RNA-seq was used to determine the short-term transcriptomic responses of Paralichthys olivaceus gill to an environmentally relevant level of water accommodated fraction (WAF) of crude oil. 213,979 transcripts and 128,482 unigenes were obtained. Differential expression analysis revealed that 1641 and 2142 genes were significantly up- and down-regulated. Enrichment analysis identified a set of GO terms and putative pathways involved in the response of P. olivaceus to WAF exposure. Analysis of the transcripts revealed the effective protective mechanisms of P. olivaceus to reduce the toxic effects of WAF. Moreover, WAF exposure induced the metabolism of energy substrates, and downstream pathway genes were modified to provide protection against toxic damage. Transcripts analysis demonstrated that the genes involved in circadian rhythm signaling were regulated in gills of P. olivaceus exposed to WAF. These results provide insights into the mechanisms of WAF-induced toxicity in fishes and into the WAF-sensitive biomarkers in P. olivaceus.

Temporal trend studies are useful to evaluate the effectiveness of regulations on local pollutants. The emission of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) and dioxin-like polychlorinated biphenyls (PCBs) has been regulated by the Korean government in accordance with the Stockholm Convention. The accumulation and temporal trends of PCDD/Fs and dioxin-like PCBs were investigated in finless porpoises (Neophocaena asiaeorientalis) collected in Korean waters. Median concentrations of PCDDs, PCDFs, non-ortho PCBs, and mono-ortho PCBs were 1.0, 1.1, 0.1, and 1.8pgTEQ/g lipid weight, respectively, which were lower than threshold values for marine mammals. Age- and sex-dependent accumulation patterns were found for PCDFs and DL-PCBs. Temporal trends in finless porpoises collected between 2003 and 2010 showed significant reduction rates of 57%, 54%, 69%, and 60% for PCDDs, PCDFs, non-ortho PCBs, and mono-ortho PCBs, respectively. Our results suggest that the regulations on dioxin-like contaminants have been effective for marine mammals in Korea.

The characteristics of dissolved organic matter (DOM) extracted from sediments with four particle sizes (<25, 63–25, 200–63 and >200μm) in the Yangtze Estuary were compared. The differences in their binding capacities for individual fluorescent components with As/Sb were studied using fluorescence-quenching titrations combined with excitation–emission matrix (EEM) spectra. The results indicated that the particle size influenced the quality and quantity of extracted DOM. With increasing particle size, the extracted DOM content, value of UV280 and acidic functional group content of the DOM decreased. Three protein-like components (C2, C3 and C4) and one humic-like component (C1) were identified using the parallel factor analysis (PARAFAC) model. Wherein, protein-like material dominated in DOM on different particle-size fractions and possessed a stronger complex capacity with As/Sb. A significant positive correlation between the complexation capacity of extracted DOM from samples, as well as with the acidic functional group content, was observed.

Microplastics are known to be an increasing component found within both marine sediments and the water column. This study carried out an initial assessment of the levels of microplastics present within the Solent estuarine complex, focusing specifically on the water column. A plankton net trawl survey was carried out, with samples analysed using visual observation and Fourier Transform Infrared Spectroscopy (FT-IR). The study identified significant quantities of plastics, ranging in shape, with hot spots found at confluence points within the estuary. Though the FT-IR analysis was inconclusive, the nature of the samples indicates the effect of oceanographic conditions on the prevalent types of microplastics found, which in turn identifies key local sources such as wastewater treatment plants and the plastics industry as being the dominant inputs.

A novel aerobic denitrification and biomineralization strain CN86 was isolated from the Qu Jiang artificial lake. Based on phylogenetic characteristics, the isolated strain was identified as Acinetobacter species. Strain CN86 was confirmed to have the ability to perform simultaneous denitrification and biomineralization. Exponential decay equation was used for the matching of kinetic processes on denitrification and biomineralization. A highest nitrate removal rate was achieved at the pH7.0, organic concentration of 1.5g/L and temperature of 30°C. An optimal hardness removal rate was obtained at the pH9.0, organic concentration of 2.0g/L and temperature of 30°C. Strain CN86 is a suitable candidate for the simultaneous removal of nitrate and hardness in groundwater treatment.

Coral populations in the Persian Gulf have a reputation for being some of the toughest in the world yet little is known about the energetic constraints of living under temperature and salinity extremes. Energy allocation for sexual reproduction in Gulf corals was evaluated relative to conspecifics living under milder environmental conditions in the Oman Sea. Fecundity was depressed at Gulf sites in two Indo-Pacific merulinid species (Cyphastrea microphthalma and Platygyra daedalea) but not in a regionally endemic acroporid (Acropora downingi). Gulf populations of each species experienced high temperature bleaching at the onset of gametogenesis in the study but fecundity was only negatively impacted in P. daedalea and A. downingi. Large population sizes of C. microphthalma and P. daedalea in the Gulf are expected to buffer reductions on colony-level fecundity. However, depleted population sizes of A. downingi at some Gulf sites equate to low reef-wide fecundity and likely impede outcrossing success.

The presence of antibiotics in animal manure represents a significant concern with respect to the introduction of antibiotic residues to the environment and the development of antibiotic-resistant pathogens. In this review, we have (1) compiled reported detections of antibiotics in poultry litter, swine manure, and cattle manure; and (2) discussed the treatment of antibiotics during conventional agricultural waste management practices. The most reported antibiotics in animal manure were fluoroquinolones, sulfonamides, and tetracyclines, all of which the World Health Organization has listed as critically important for human health. Relatively high treatment efficiencies were observed for antibiotics in composting, anaerobic digestion, and aerobic/anaerobic lagooning. Interestingly, active management of compost piles did not demonstrate a significant increase in antibiotic degradation; however, low- and high-intensity compost systems exhibited high treatment efficiencies for most antibiotics. Anaerobic digestion was not effective for some key antibiotics, including lincosamides and select sulfonamides and fluoroquinolones. Given the potential for energy recovery during anaerobic digestion of agricultural waste, efforts to optimize antibiotic degradation represent an important area for future research. Lagoons also exhibited fairly high levels of antibiotic treatment, especially for aerobic systems; however, the operational costs/complexity of these systems inhibit utilization at the full-scale. No overall trends in antibiotic treatment efficiency during these three agricultural waste management practices were observed. Finally, we posit that increased efforts to include analysis of antibiotic residues in animal manure in national surveillance programs will provide important information to address concerns over the continued use of antimicrobials in animal feeding operations.

General abundance and species composition of a dinoflagellate community in Yemeni coastal waters of Al Salif (southern Red Sea) were studied with a view to understand the annual variations in particular the toxic species. Dinoflagellates were more abundant among phytoplankton. Thirty five dinoflagellate taxa were identified, among which 12 were reported as potentially toxic species. A significant change in seasonal abundance was recorded with the maximum (2.27∗106cellsl−1) in May, and the minimum (2.50∗102cellsl−1) recorded in January. Kryptoperidinium foliaceum, which was reported for the first time from the Red Sea, was the most abundant species with a maximum in May 2013 (2.26∗106cellsl−1). Spearman's rank correlation analysis indicates that, total harmful dinoflagellate cells, K. foliaceum, Prorocentrum gracile and Prorocentrum micans were significantly correlated with temperature. This study suggests that Yemeni waters should be monitored to investigate harmful species and to identify areas and seasons at higher risk.