Ports are subject to a variety of anthropogenic impacts, and there is mounting evidence of faecal contamination through several routes. Yet, little is known about pollution in ports by faecal indicator bacteria (FIB). FIB spatio-temporal dynamics were assessed in 12 ports of the Adriatic Sea, a semi-enclosed basin under strong anthropogenic pressure, and their relationships with environmental variables were explored to gain insight into pollution sources. FIB were abundant in ports, often more so than in adjacent areas; their abundance patterns were related to salinity, oxygen, and nutrient levels. In addition, a molecular method, quantitative (q)PCR, was used to quantify FIB. qPCR enabled faster FIB determination and water quality monitoring that culture-based methods. These data provide robust baseline evidence of faecal contamination in ports and can be used to improve the management of routine port activities (dredging and ballast water exchange), having potential to spread pathogens in the sea.

This study utilizes suspended particles and seafloor sediments collected from the northern Gulf of Mexico (GOM) continental margin to study the fate, transport, residence times and accumulation rates of particle-bound polycyclic aromatic hydrocarbons (PAHs). Total particulate-PAHs and particulate organic carbon (POC) varied between 0.9 and 7.0 ng/L, and 4–131 μg/L, respectively. Particulate-PAHs were positively correlated with POC, while both particulate-PAHs and POC were negatively correlated with salinity (P-value < 0.05). These results show that the river-derived particle influx and associated POC are important vectors for transport and fate of particulate-PAHs in the river-dominated northern GOM continental ecosystems. The composition of underlying seafloor sediment-PAHs were not correlated to the water column particulate-PAHs, which is attributed to re-mineralization, sediment resuspension/redistribution and different timescales of comparison. The 210Pb-derived residence time of particles and associated particulate-PAHs in water column varied between 2 and 39 days. Residence times of particulate-PAHs were significantly correlated with seafloor sediment-PAHs accumulation rates, shorter water column residence times leading to higher PAHs accumulation rates.

Microplastics are commonly found in marine ecosystems, but their distribution, prevalence, and impacts on resident fauna are still not well understood. Microplastics in coastal sediments expose invertebrate infauna to the risk of ingestion of plastic debris and associated toxicants. We assessed the prevalence of microplastics in beach sediments and ingested by Pacific mole crabs (Emerita analoga) at sandy beaches spanning >900 km of the California coast. Microplastics were present in sediments of every one of 51 beaches sampled. At a subset of 38 beaches Pacific mole crabs were collected and crabs at every beach had ingested microplastics. Across all beaches sampled, an average of 35% of Pacific mole crabs examined had microplastics in their guts. Our study demonstrates that microplastics are ubiquitous in sediments on California beaches and they are frequently consumed by a filter-feeding crustacean that is a common prey item in the diet of a wide variety of taxa, including fishes and birds.

This study presents baseline records of trace metals for two commercial shrimps from the inner continental shelf of southeast Brazil (~22°S). Organisms were sampled in 2004, 10 years before the beginning of large port activities in coastal waters. The concentrations of trace metals in muscle tissues (μg.g⁻¹ w.w.) of Xyphopenaues kroyeri and Artemesia longinaris are as follows: Al: 141.57 and 146.71, Fe: 83.17 and 91.68, Zn: 28.69 and 29.70, Cu: 7.19 and 3.94, Mn: 1.47 and 1.72, Pb: 1.14 and 0.60, V: 0.66 and 0.56, Ni: 0.38 and 0.34, Cr: 0.42 and 0.29, and Cd: 0.15 and 0.14, respectively. Significantly higher concentrations of Cu and Pb were recorded for X. kroyeri. In general, the concentrations are below the maximum permissible limits for metals in fishery/food products, as established by the Brazilian Agency for Sanitary Vigilance (ANVISA), except for Pb and Cr. These baseline records are relevant for future monitoring.

Samples for sediment and two species of native mangrove plants were collected from seven sampling sites for assessing the level of metal contamination. Results of the studied metals displayed the order of pollution as Fe > Ti > Zr > Rb > Zn > Sr > Pb > Y > Cu > Cr > As accordingly. Geoaccumulation index and contamination factor revealed that the sediment samples were unpolluted to moderately polluted by Zn, Fe, Ti, Rb, Y, and Zr. Ecological risk factor depicted a pollution-free condition in the study areas. PCA, CA, and correlation coefficient indicated that the source of the metals in the environment was anthropogenic. Bioconcentration factor values were found to be below 1 in both plant species. Conversely, transfer factor values for most heavy metals were found to be >1 in both plant species, which reflects the phytoremediation ability of plants.

The prediction models of MWQI in mangrove and estuarine zones were constructed. The 2011–2015 data employed in this study entailed 13 parameters from six monitoring stations in West Malaysia. Spatial discriminant analysis (SDA) had recommended seven significant parameters to develop the MWQI which were DO, TSS, O&G, PO4, Cd, Cr and Zn. These selected parameters were then used to develop prediction models for the MWQI using artificial neural network (ANN) and multiple linear regressions (MLR). The SDA-ANN model had higher R2 value for training (0.9044) and validation (0.7113) results than SDA-MLR model and was chosen as the best model in mangrove estuarine zone. The SDA-ANN model had also demonstrated lower RMSE (5.224) than the SDA-MLR (12.7755). In summary, this work suggested that ANN was an effective tool to compute the MWQ in mangrove estuarine zone and a powerful alternative prediction model as compared to the other modelling methods.

Increased sediment loads within algal turfs, can be highly detrimental to coral reef systems. However, significant knowledge gaps remain in relation to sediment dynamics, especially linking suspended sediments, sedimentation and turf-bound sediments. To examine these links, a series of different methods for quantifying suspended sediments, sedimentation and the accumulation of turf sediments were compared, simultaneously, on an inner-shelf reef. We revealed that the amount and composition of sediment quantified using different methods varied markedly, with commonly employed measures of sedimentation failing to accurately reflect patterns of sediment accumulation in turfs. Our results highlighted the propensity for turfs to trap and retain sediments, with turfs accumulating approximately 2.6 times more sediment than traps, and 6 times more sediment than SedPods, over a seven-day period. This study highlights the major, but often overlooked, role that algal turfs can play in sediment dynamics on coral reefs.

The European oyster Ostrea edulis is a keystone species that is internationally recognised as ‘threatened and declining’ in the NE Atlantic by OSPAR and several nations have consequently adopted strategies for its conservation and restoration. Understanding the settlement behaviour of O. edulis larvae is crucial to inform these strategies. We compared the efficiency of several treatments in triggering settlement. The most effective settlement occurred with the presence of conspecifics: 100% settled in <23 h. Marine stones with habitat-associated biofilms induced 81% settlement that started after a 45 h delay. Sterile shells and terrestrial stones did not induce more settlement than control treatments. These results indicate that O. edulis larvae are gregarious and finely-tuned to settle in response to cues which are indicative of their adult habitat requirements. The role of chemical cues in mediating settlement, and the importance of this to restoration, are discussed.

Soundscapes are vital to acoustically specialized animals. Using passive acoustic monitoring data, the temporal and spectral variations in the soundscape of a Chinese white dolphin hotspot were analyzed. By cluster analysis, the 1/3 octave band power spectrum can be grouped into three bands with median overall contribution rates of 35.24, 14.14 and 30.61%. Significant diel and tidal soundscape variations were observed with a generalized linear model. Temporal patterns and frequency ranges of middle frequency band sound matched well with those of fish vocalization, indicating that fish might serve as a signal source. Dolphin sounds were mainly detected in periods involving low levels of ambient sound and without fish vocalization, which could reflect noise avoidance and passive eavesdropping behaviors engaged in by the predator. Pre-construction data can be used to assess the effects of offshore windfarms on acoustic environments and aquatic animals by comparing them with the soundscape of postconstruction and/or postmitigation.

The Arabian Gulf is a warm (summer SST > 30 °C) and hypersaline (salinity > 40 psu at any time) marginal sea of the Indian Ocean. This paper reports on a 3-year study of seasonal and spatial changes of primary production and associated physico-chemical and biological parameters in the coastal waters of Saudi Arabia in the western Arabian Gulf. The primary production rates were low and yet showed a seasonality, with a major spring peak and a minor autumn peak, and a possible significant role for heterotrophs. While the strong relationships between the net changes of carbon uptake and nutrients between seasons showed a control of primary production by the availability of nutrients, the decrease in primary production between spring and summer when nutrients continued to increase suggests that the primary production at this time could have been controlled by higher ambient temperatures and intensities of incident light.