Using fluorescence spectroscopy and parallel factor analysis (PARAFAC) we characterized and modeled the fluorescence properties of dissolved organic matter (DOM) in samples from the Penobscot River, Androscoggin River, Penobscot Bay, and the Gulf of Maine (GoM). We analyzed excitation-emission matrices (EEMs) using an existing PARAFAC model (Cory and McKnight, 2005) and created a system-specific model with seven components (GoM PARAFAC). The GoM PARAFAC model contained six components similar to those in other PARAFAC models and one unique component with a spectrum similar to a residual found using the Cory and McKnight (2005) model. The unique component was abundant in samples from the Androscoggin River immediately downstream of a pulp mill effluent release site. The detection of a PARAFAC component associated with an anthropogenic source of DOM, such as pulp mill effluent, demonstrates the importance for rigorously analyzing PARAFAC residuals and developing system-specific models.

Marine debris, particularly debris that is composed of lost or abandoned fishing gear, is recognized as a serious threat to marine life, vessels, and coral reefs. The goal of the GhostNet project is the detection of derelict nets at sea through the use of weather and ocean models, drifting buoys and satellite imagery to locate convergent areas where nets are likely to collect, followed by airborne surveys with trained observers and remote sensing instruments to spot individual derelict nets. These components of GhostNet were first tested together in the field during a 14-day marine debris survey of the Gulf of Alaska in July and August 2003. Model, buoy, and satellite data were used in flight planning. A manned aircraft survey with visible and IR cameras and a LIDAR instrument located debris in the targeted locations, including 102 individual pieces of debris of anthropogenic or terrestrial origin.

This paper describes different numerical models of ocean circulation the output of which can be applied to study patterns and pathways of drifting marine debris. The paper focuses on model output that is readily available rather than on numerical models that could be configured and run locally. These include operational models from the US Navy (the Navy Layered Ocean Model (NLOM), Coastal Ocean Model (NCOM), and Hybrid Coordinate Ocean Model (HYCOM)), data assimilating reanalysis models (the Simple Ocean Data Assimilation (SODA), the Global Ocean Data Assimilation Experiment (GODAE) models), and the European Center for Medium-Range Weather Forecasts (ECMWF) ocean reanalysis (Ocean Reanalysis System, ECMWF/ORA-S3). The paper describes the underlying physics in each model system, limitations, and where to obtain the model output.

Tropical coastal ecosystems, including the Great Barrier Reef (GBR) of Australia are increasingly threatened by pollution; yet few studies have investigated the sensitivity of GBR species to these pollutants. Here we exposed juveniles of the tropical reef fish Acanthochromis polyacanthus (spiny damselfish) to three concentrations of the insecticide chlorpyrifos (CPF) and measured (i) muscle cholinesterase (ChE) activity; (ii) hepatic glutathione-S-transferase (GST) activity; and (iii) coenzyme Q (CoQ) redox balance, after 6h and 96h of exposure. After 96h, muscle ChE activity was significantly inhibited by 26%, 49% and 53% when fish were exposed to 1, 10 or 100μg/L CPF, respectively. Muscle ChE characterization revealed three types of ChEs, including two atypical forms. Hepatic CoQ antioxidant form significantly increased at 10μg/L after 6h of exposure, potentially demonstrating an early response to CPF-induced oxidative stress in liver. Hepatic GST was not affected by CPF exposure.

Development of the Great Barrier Reef (GBR) catchments in the last 150years has increased the loads of suspended sediment, nutrients and pesticides (‘pollutants’) delivered to the GBR. The scale and type of development, the pollutants generated and the ecosystems offshore vary regionally. We analysed the relative risk of pollutants from agricultural land uses and identified the sources of these pollutants from different land uses for each region to develop priorities for management. The assessment showed the Wet Tropics and Mackay Whitsunday regions to be of relatively high risk dominated by sugarcane cultivation, contributing pesticide and dissolved inorganic nitrogen (DIN). The Burdekin and Fitzroy ranked medium–high risk dominated by grazing suspended sediment inputs for both, and additionally sugarcane DIN and pesticide inputs for the Burdekin. The Burnett Mary ranked medium risk, dominated by grazing and sugarcane. Cape York was not formally ranked but is considered to be low risk.

Protection of non-human biota from ionizing contaminants, especially in the vicinity of nuclear installations is a very important aspect for nuclear engineers and ecologists. In this view, a baseline data on the activity concentration of ²¹⁰Po and ²¹⁰Pb were quantified in different tissues of molluscs inhabiting the intertidal region along the coast of Kudankulam. The activity concentration was noticed higher in the organs associated with digestion and metabolism. Filter feeding bivalve molluscs registered the maximum activity of ²¹⁰Po in their whole body compared to grazing gastropods. ²¹⁰Po:²¹⁰Pb ratio was calculated to be greater than unity in most of the analysed tissues. The ecological sensitivity of molluscs to the radiation exposure and the safeness of the environment was analysed by calculating the external and internal dose rate. The hazard quotient for molluscs was lesser than the global bench mark dose rate of 10μGyh–¹.

Our current view about the relationship between metals and bacteria in marine sediments might be biased because most studies only use ex situ approaches to quantify metals. The aim of the present research was to compare ex situ and in situ methods of metal measurement (DET and DGT – diffusive equilibration or diffusive gradients in thin-films) and relate the results with two commonly used microbiological variables (bacterial biomass and bacterial diversity as revealed by DGGE). No previous studies have used such in situ approaches in microbial ecology. For biomass and most of the investigated trace metals (Ag, Cd, Sn, Cr, Ni, Cu, Pb, and Al) no significant correlations were found. The exceptions were Fe, Mn, Co, and As which behave like micronutrients. For bacterial diversity, no relevant relationships were found. We conclude that in situ methods are more adapted tools for microbial ecologists but that ex situ approaches are still necessary.

Suspended sediment concentration (SS) is an important indicator of marine environmental changes due to natural causes such as tides, tidal currents, and river discharges, as well as human activities such as construction in coastal regions. In the Saemangeum area on the west coast of Korea, construction of a huge tidal dyke for land reclamation has strongly influenced the coastal environment. This study used remotely sensed data to analyze the SS changes in coastal waters caused by the dyke construction. Landsat and MODIS satellite images were used for the spatial analysis of finer patterns and for the detailed temporal analysis, respectively. Forty Landsat scenes and 105 monthly composite MODIS images observed during 1985–2010 were employed, and four field campaigns (from 2005 to 2006) were performed to verify the image-derived SS. The results of the satellite data analyses showed that the seawater was clear before the dyke construction, with SS values lower than 20g/m³. These values increased continuously as the dyke construction progressed. The maximum SS values appeared just before completion of the fourth dyke. Values decreased to below 5g/m³ after dyke construction. These changes indicated tidal current modification. Some eddies and plumes were observed in the images generated from Landsat data. Landsat and MODIS can reveal that coastal water turbidity was greatly reduced after completion of the construction.

Plastic resin pellets collected from remote islands in the Pacific, Atlantic, and Indian Oceans and the Caribbean Sea were analyzed for polychlorinated biphenyls (PCBs), dichloro-diphenyltrichloroethane and its degradation products (DDTs), and hexachlorocyclohexanes (HCHs). Concentrations of PCBs (sum of 13 congeners) in the pellets were 0.1–9.9ng/g-pellet. These were 1–3 orders of magnitude smaller than those observed in pellets from industrialized coastal shores. Concentrations of DDTs in the pellets were 0.8–4.1ng/g-pellet. HCH concentrations were 0.6–1.7ng/g-pellet, except for 19.3ng/g-pellet on St. Helena, where current use of lindane is likely influence. This study provides background levels of POPs (PCBs<10ng/g-pellet, DDTs<4ng/g-pellet, HCHs<2ng/g-pellet) for International Pellet Watch. Sporadic large concentrations of POPs were found in some pellet samples from remote islands and should be considered in future assessments of pollutants on plastic debris.

The mode of action of PAHs that causes fish developmental malformations is unclear. The embryotoxicity of marine medaka (Oryzias melastigma) was investigated after individual exposure to three- to five-ring PAHs Phe, Py, and BaP or co-exposure with α-ANF for 18days. We found that the relationships between EROD induction and developmental deformities of embryos showed a various pattern under different exposure scenarios of Phe, Py, and BaP, which suggested possibly different modes of action in determining the developmental toxicities. As for co-exposure scenarios of each PAH combined with ANF, it showed potentially synergistic effects. The inhibited CYP1A mediated enzyme activity by ANF after co-exposure did not effectively alleviate developmental toxicity of embryo. It showed potentially synergistic effects after co-exposure of marine fish embryos to CYP1A inhibitors and PAH-type CYP1A inducers. Heart deformities in the early life stages of marine medaka were recommended as a biomarker for indicating the extent of PAH pollution.