Measures of transport scale in aquatic systems can contribute to the formulation of definitions of indicators of the system’s ecological properties. This paper addresses confinement, a specific transport scale proposed by biological scientists as a parameter that can capture and synthesize the principal properties that determine the spatial structure of biological communities in transitional environments. Currently, there is no direct experimental measure of confinement. In this study, a methodology based on the accumulation rate within a lagoon of a passive tracer of marine origin is proposed, the influences of different factors in the calculation of confinement are analyzed, and general recommendations are derived. In particular, we analyze the spatial and the temporal variability of confinement and its sensitivity to the seasonal variability of climatic forcing, the inputs from rivers and the parameterization of the tidal exchanges. The Lagoon of Venice is used as a case study.

In the present work, fat, skin, liver and muscle samples from Leptonychotes weddellii (Weddell seal, n=2 individuals), Lobodon carcinophagus (crabeater seal, n=2), Arctocephalus gazella (Antarctic fur seal, n=3) and Mirounga leonina (southern elephant seal, n=1) were collected from King George Island, Antarctica, and analysed for POPs (PCBs, organochlorine pesticides and PBDEs) and stable isotopes (δ¹³C and δ¹⁵N in all tissues but fat). PBDEs could be found in only one sample (L. weddellii fat). Generally, PCBs (from 74 to 523ngg⁻¹lw), DDTs (from 14 to 168ngg⁻¹lw) and chlordanes (from 9 to 78ngg⁻¹lw) were the prevailing compounds. Results showed a clear stratification in accordance with ecological data. Nonetheless, stable isotope analyses provide a deeper insight into fluctuations due to migrations and nutritional stress. Correlation between δ¹⁵N and pollutants suggests, to some degree, a considerable ability to metabolize and/or excrete the majority of them.

A rapid assessment, using the abundance and distribution range method, was used to evaluate the status of a large branching bryozoan, Zoobotryon verticillatum attached to the immersed part of marina pontoons in the Canary Islands. Colonies were also found attached to the hulls of leisure craft berthed alongside pontoons at three marinas in Lanzarote during 2012. Low levels of abundance and distribution of the bryozoan occurred in marinas with a freshwater influence whereas in a sheltered marina lacking direct freshwater inputs colonies occurred at ∼2 per metre of combined pontoon length. While the occurrence of this bryozoan is recent it may be expected to occur elsewhere in Macaronesia most probably spread by leisure craft.

This study aims to establish a low-altitude remote sensing system for surveying litter on a beach or the ocean using a remote-controlled digital camera suspended from a balloon filled with helium gas. The resultant images are processed to identify the litter using projective transformation method and color difference in the CIELUV color space. Low-altitude remote sensing experimental observations were conducted on two locations in Japan. Although the sizes of the litter and the areas covered are distorted in the original photographs taken at various angles and heights, the proposed image process system is capable of identifying object positions with a high degree of accuracy (1–3m). Furthermore, the color difference approach in the CIELUV color space used in this study is well capable of extracting pixels of litter objects of various colors allowing us to estimate the number of objects from the photographs.

The environmental characteristics of Ahe deep lagoon (Tuamotu Archipelago, French Polynesia) were studied over 3years with the aim of explaining the spatial and temporal variability of the natural food available for pearl oysters with a special focus on phytoplankton biomass and global photosynthesis/respiration ratio of the lagoon. Chlorophyll averaged 0.34±0.01μgL⁻¹ and our findings did not confirm increased phytoplankton biomass in deep lagoonal waters. Phytoplankton production appears to be limited firstly by nitrogen and respiratory processes overpass photosynthetic processes at least in the north-eastern edge of the atoll. Grazing by pearl oysters in culture seems to decrease the POC concentration but not the phytoplankton biomass. Oysters graze mainly on non chlorophyllian particles.

The biofiltration capacity, biomass-yield and accumulation of N- and C-compounds of Hydropuntia cornea were analyzed. Algae were grown in different conditions for 28d: outdoor and indoor, with or without fishpond effluents. N-uptake efficiency of these effluents was higher than 95% after 7d both outdoors and indoors. N-enriched conditions reduced the extent of photoinhibition and increased the maximal quantum yield in H. cornea. The biomass-yield was higher in outdoor grown-algae after 7d and decreased independently of the treatment after 28d. N, acid polysaccharide (AP) and mycosporine-like amino acid (MAA)-yields decreased throughout the experiment in all conditions. The highest MAA-yield was observed in fishpond effluent outdoor-grown algae, indicating a positive effect of increased radiation on MAA accumulation. However, APs were higher under N-depleted conditions. The use of MAAs as UV-screening and antioxidants, and the use of AP as immunostimulants are discussed.

In view of increasing environmental awareness and biodiversity conservation, understanding the main forcing mechanism driving biogeochemical cycles in coral reefs and lagoon coastal areas is a priority. La Niña events cause unbalanced situations in the Equatorial Pacific and result in enhanced precipitation in South West Pacific coastal areas. We investigated the impact of heavy rainfalls during the 2008 La Niña event on the New Caledonia lagoon using a 3D coupled on-line hydrodynamic–biogeochemical model. Simulations and data showed that the whole lagoon was impacted by river inputs and stronger hydrodynamics, enhancing chlorophyll-a concentration by a factor between 1.7 and 1.9. The coupled model provided new insights into plume transport, highlighting that eastern plumes can be advected northwards or can reach the South West Lagoon, depending on the balance between regional, tide-induced, and wind-induced surface currents. It also provided a synoptic view of lagoon biogeochemical–hydrodynamic response, when remote sensing data are not available due to cloud coverage.

Vertical profiles of dissolved and particulate Mn, Fe, Ni, Cu, Zn, Cd, Pb, and ²³⁴Th were determined in the Hung-Tsai Trough off southwestern Taiwan during 19–23 November, 2004. Except in the case of Cd, the distribution coefficient (Kd) of the trace elements showed a negative correlation with the suspended particle concentration. Based on the average Kd values, the general sequence of particle affinities for the eight trace elements is, from highest to lowest, Fe>Mn≈Pb>Zn≈Th>Cd≈Cu≈Ni. The trace metal data was coupled with the particle removal flux estimated from ²³⁴Th/²³⁸U disequilibrium to investigate metal removal by particle sinking from the euphotic layer. The residence time of trace elements with respect to particle removal from the euphotic layer was estimated. A negative correlation between the residence time and the distribution coefficient for the trace metals was found.

Coral cores were collected along an environmental and water quality gradient through the Whitsunday Island group, Great Barrier Reef (Australia), for trace element and stable isotope analysis. The primary aim of the study was to examine if this gradient could be detected in coral records and, if so, whether the gradient has changed over time with changing land use in the adjacent river catchments. Y/Ca was the trace element ratio which varied spatially across the gradient, with concentrations progressively decreasing away from the river mouths. The Ba/Ca and Y/Ca ratios were the only indicators of change in the gradient through time, increasing shortly after European settlement. The Mn/Ca ratio responded to local disturbance related to the construction of tourism infrastructure. Nitrogen isotope ratios showed no apparent trend over time. This study highlights the importance of site selection when using coral records to record regional environmental signals.

Dinophysis acuminata and Dinophysis acuta produce lipophilic toxins that cause most shellfish harvesting closures in the Atlantic coastal waters of Europe. Dinophysis often exhibit patchy distributions and sampling with conventional methods may fail to detect them. A 6-month calibration study in 2006, plus an additional sampling in 2010 were carried out in Galicia to compare Dinophysis counts obtained from weekly high vertical resolution bottle samples with depth-integrated hose samples. Counts with these two methods were comparable at some depth-ranges, but hose maxima were over one order of magnitude lower under thin-layer scenarios. Estimates from hose samplers should be used with caution in programmes using a “Dinophysis index”, either to trigger shellfish sampling or to establish precautionary harvesting closures. In general, hose samplers provide reliable information on the occurrence of Dinophysis except under extreme site-specific hydrodynamic conditions. This study adds new information about the heterogeneous, specific vertical distributions of two Dinophysis spp.