Statistical analysis of rainfall data from 2005 to 2015 showed that atmospheric deposition supplied large amount of dissolved inorganic nitrogen (38–155 mg·m−2·month−1) in N-deficient South China Sea and Eastern Indian Ocean. To understand marine ecosystem responses to increasing nutrient disturbances, we implemented field mesocosm experiments to study phytoplankton community structure and biodiversity responses to nutrient treatments with nitrate, phosphate and iron across tropical seas. Our results showed that DIN supply would change phytoplankton community structure and stimulated the regime shift from cyanobacteria to diatoms (relative dominance R > 0). Phytoplankton communities were dominated by diatoms (relative abundance >50%) accompanied by high chlorophyll a content with 1.58–39.27 μg·L−1 in DIN-added cultures, whereas cyanobacteria dominated communities (relative abundance >60%) with low biomass of 0.12–0.18 μg·L−1 in undisturbed cultures. Simultaneously increased DIN loading from atmospheric deposition would decrease ecological diversity of tropical seas owing to species competition and succession (Shannon diversity H′ decreased to <1).

Given predicted increases in urbanization in tropical and subtropical regions, understanding the processes shaping urban coral reefs may be essential for anticipating future conservation challenges. We used a case study approach to identify unifying patterns of urban coral reefs and clarify the effects of urbanization on hard coral assemblages. Data were compiled from 11 cities throughout East and Southeast Asia, with particular focus on Singapore, Jakarta, Hong Kong, and Naha (Okinawa). Our review highlights several key characteristics of urban coral reefs, including “reef compression” (a decline in bathymetric range with increasing turbidity and decreasing water clarity over time and relative to shore), dominance by domed coral growth forms and low reef complexity, variable city-specific inshore-offshore gradients, early declines in coral cover with recent fluctuating periods of acute impacts and rapid recovery, and colonization of urban infrastructure by hard corals. We present hypotheses for urban reef community dynamics and discuss potential of ecological engineering for corals in urban areas.

Phase shift, resulting from coral reef degradation, has been frequently recorded on reefs in optimal conditions, while marginal reefs were considered more resistant due to few records. Noting the lack of marginal reef phase shift studies, we quantitatively assessed their geographic extent in the Southwest Atlantic. Using metadata and a calculated phase shift index, we identified phase shifts from corals to both zoanthid and macroalgal dominance. Positive correlations existed between phase shift and local human impacts for zoanthids: proximity to human populations >100,000 inhabitants, urbanized surfaces and dredged ports and a negative relationship to the endurance of SST >1 °C above normal. Macroalgal shifts positively correlated to ports and urbanized surfaces, higher latitudes and shore proximity, indicating a possible link to nutrient runoff. The high frequency of these phase shifts suggests greater degradation than reported for Caribbean reefs, suggesting that marginal reefs do not have higher natural resistance to human impacts.

Seven hundred and nine surface sediment samples, along with deeper sediment samples, were collected from Hebei Province along the coastal section of the Bohai Sea, China, and analyzed for grain size, concentrations of organic carbon (Corg) and heavy metals (Cu, Pb, Zn, Cr, Cd, As, and Hg). Results indicated that the average concentrations in the sediments were 16.1 mg/kg (Cu), 19.4 mg/kg (Pb), 50 mg/kg (Zn), 48.8 mg/kg (Cr), 0.1 mg/kg (Cd), 8.4 mg/kg (As), and 20.3 μg/kg (Hg). These concentrations generally met the China Marine Sediment Quality criteria. However, both pollution assessments indicated moderate to strong Cd and Hg contamination in the study area. The potential ecological risk index suggested that the combined ecological risk of the seven studied metals may be low, but that 24.5% of the sites, where sediments were finer and higher in Corg concentration, had high ecological risk in Hg and Cd pollution.

The response units of protozoan communities, based on a community-weighted mean (CWM) dataset across trait-taxon space, were investigated in order to determine their utility as bioindicators of marine water quality. From a total of 17 functional categories of seven biological traits, three functional response units (FRUs) were identified at correlation levels of >0.75. FRUs 1 and 3 generally dominated the communities in more polluted areas during warm seasons, while FRU2 appeared to prefer less polluted waters and dominated the communities in spring and winter. Correlation analysis demonstrated that the CWM values of FRUs 1 and 3 were significantly positively correlated to the concentrations of chemical oxygen demand (COD), whereas those of FRU2 were negatively correlated to COD. Across taxon-function space, 16 species were identified as potential bioindicators of water quality. These results suggest that redundancy analysis across trait-taxon space is a useful tool for identifying indicators of environmental quality.

Monitoring efforts are required to understand the sources, distribution and abundance of microplastic pollution. To verify the abundance of microplastics along the Tuscan coastal waters (Italy), water-column and surface samples were collected in two seasons across four transects at different distances to the coast (0.5, 5, 10 and 20 km), within the implementation of the European Marine Strategy Framework Directive. The results show an average concentration of 0.26 items/m³ in the water-column samples and 41.1 g/km² and 69,161.3 items/km² of floating microplastics, with an increase with the distance to the coast The seasonality and the sampling area do not affect the abundance of microplastics. The most abundant size class is 1–2.5 mm as fragments and sheets suggesting that fragmentation of larger polyethylene and polypropylene items could be the main source of microplastics. These data represent the application of a harmonized protocol to make the data on microplastics comparable and reliable.

In Hawaii, glyphosate-based herbicides frequently sprayed near shorelines may be affecting non-target marine species. Glyphosate inhibits aromatic amino acid biosynthesis (shikimate pathway), and is toxic to beneficial gut bacteria in cattle and chickens. Effects of glyphosate on gut bacteria in marine herbivorous turtles were assessed in vitro. When cultures of mixed bacterial communities from gastrointestinal tracts of freshly euthanized green turtles (Chelonia mydas), were exposed for 24h to six glyphosate concentrations (plus deionized water control), bacterial density was significantly lower at glyphosate concentrations≥2.2×10⁻⁴gL⁻¹ (absorbance measured at 600nm wavelength). Using a modified Kirby-Bauer disk diffusion assay, the growth of four bacterial isolates (Pantoea, Proteus, Shigella, and Staphylococcus) was significantly inhibited by glyphosate concentrations≥1.76×10⁻³gL⁻¹. Reduced growth or lower survival of gut bacteria in green turtles exposed to glyphosate could have adverse effects on turtle digestion and overall health.

Despite the rapid construction of offshore wind farms, the available information regarding the risks of this type of development in terms of emerging pollutants, particularly microplastics, is scarce. In this study, we quantified the level of microplastic pollution at an offshore wind farm in the Yellow Sea, China, in 2016. The abundance of microplastics was 0.330 ± 0.278 items/m3 in the surface water and 2.58 ± 1.14 items/g (dry) in the sediment. To the best of our knowledge, the level of microplastic pollution in our study area was slightly higher than that in coastal areas around the world. The microplastics detected in the surface waters and sediments were mainly fibrous (75.3% and 68.7%, respectively) and consisted of some granules and films. The microplastics in the samples might originate from garments or ropes via wastewater discharge. The abundance of plastic in the water and sediment samples collected from the wind farm area was lower than that in the samples collected from outside the wind farm area. The anthropogenic hydrodynamic effect was the main factor affecting the local distribution of microplastics. The presence of a wind farm could increase the bed shear stress during ebb tide, disturbing the bed sediment, facilitating its initiation and transport, and ultimately increasing the ease of washing away the microplastics adhered to the sediment. This study will serve as a reference for further studies of the distribution and migration of microplastics in coastal zones subjected to similar marine utilization.

A comprehensive analysis on the phytoplankton ecology with special reference to different phytoplankton size classes was carried out at green Noctiluca scintillans (hereafter Noctiluca) bloom and non-bloom locations in offshore waters of the northern Arabian Sea. At the bloom locations, green Noctiluca represented a dense mono-specific proliferation with average cell density of 10.16 ± 5.806 × 104 cells-L−1 and relative abundance share of 98.63%. Active photosynthesis through prasinophytic endosymbiont was depicted from net community production magnitude reaching 85.26 mgC/m3/Day under low prey abundance. Parallel swarming of Porpita porpita, a voracious copepod feeder signified the competitive advantage of Noctiluca to have the phytoplankton prey. Average concentration of picophytoplankton biomass was eleven times lower in surface waters of non-bloom stations in comparison to bloom. Higher N:P ratio in subsurface waters of non-bloom stations signified non-utilization of nitrogenous nutrients. Green Noctiluca bloom onset subsequent to diatom rich conditions was evident from spatio-temporal ocean colour satellite imageries.

Synoptic sediment quality triad (contaminants, benthic assemblages, toxicity testing) data were collected for sites in Sydney estuary, adjacent Cooks River and five less-modified southern estuaries. Matching data tested relationships between contaminants and benthic assemblages, correlations with specific contaminants, and the ability of sediment quality guidelines to predict the risk of adverse effects.Significant but weak relationships occurred in complex patterns between assemblages, contaminant concentrations and environmental variables. Maximum benthos abundance occurred where sediment contamination was high and was dominated by polychaetes. Spionidae (polychaete) and Galeommatidae (mollusc) abundances were strongly correlated with site environmental characteristics and with varying mixtures of metals and organic contaminants.The risk of adverse effects on benthic assemblage structure increased with increasing sediment toxicity except for areas of very high contamination and for non-bioavailable anthropogenic chemicals. The overall weight-of-evidence scores differentiated the highly modified sites from less-contaminated southern estuaries, where toxicity scores were higher than predicted.