IITA's research in breeding cassava and sweet potato for resistance to pests and diseases of major economic importance in Africa is discussed under the headings: breeding cassava for resistance to pests (cassava green spider mite (Mononychellus progresivus and M. tanajoa) and cassava mealybug (Phenacoccus manihoti)); breeding cassava for resistance to disease (African cassava mosaic geminivirus, cassava bacterial blight (Xanthomonas campestris pv. manihotis) and cassava anthracnose disease (Colletotrichum gloeosporioides f.sp. manihotis)); and breeding sweet potato for resistance to sweet potato virus, weevils and nematodes and integrated control of nematodes.

Wild potato species (genus Solanum, section Petota) represent a tremendously diverse gene pool which is traditionally utilized as a source of diverse traits for potato breeding. Abiotic and biotic stress tolerance and resistance belong to the most frequently utilized traits of wild species in potato breeding programs. This review provides an introduction to the taxonomy, centre of diversity, genetic characteristics, evolution and important tolerance and resistance traits of wild potatoes and their use for potato breeding. The review has been written for readers who are interested in the problems of finding and utilization of new resistance genes from the wild genetic resources.

Potato (Solanum tuberosum L.) is among the most important upland crops cultivated for many end uses throughout Japan. Potatoes are consumed in different ways, such as table use, food processing, starch production, and others. At the same time, various cropping systems are adopted according to environmental conditions. Although potato-breeding programs in Japan are conducted by considering these demands, pest and disease resistance is one of the most important traits required for all modern cultivars. There are many pests and diseases affecting potato production in Japan, where conferring resistance against potato cyst nematodes, late blight, common scab, bacterial wilt, and viral diseases has become a main target of breeding. Artificial inoculation tests and cultivation in infested fields were traditionally conducted, in order to evaluate the levels of resistance among breeding materials. However, several DNA markers for pest and disease resistance genes have recently been developed for the selection of resistant genotypes. We have taken both approaches toward the selection of pest and disease resistant genotypes at each breeding step. This review introduces our approaches to develop new pest and disease resistant potato cultivars by using classical and molecular approaches.

In Poland the Plant Breeding and Acclimatization Institute is responsible for officially assessing the resistance to Synchytrium endobioticum of domestic potato breeding lines and cultivars from other countries. Cultivation of potato cultivars in Poland requires confirmation of resistance to potato wart disease. The official assessment uses the modified Glynne-Lemmerzahl method (laboratory tests) and pot tests. The full cycle of assessment of resistance to wart disease requires 52 seed potatoes per variety/breeding line. Forty two tubers are used in laboratory tests. To complete the laboratory tests the next 10 tubers are grown in pot tests (in soil with winter sporangia) during the vegetation season. The final results for domestic breeding lines of potato are available after 3 years of investigation. For cultivars from other countries the authorization of resistance to S. endobioticum takes approximately one year. The Polish breeders (breeding lines) or the breeder's representative (cultivars from other countries) receive the certificate only for lines/cultivars with laboratory and field resistance to S. endobioticum.

International Potato Center, 'New sources of resistance to potato late blight disease in Peru. Project profile', p.2, International Potato Center, 2020 | Late blight disease in potato is possibly the most devastating crop disease in history. This project seeks to identify new sources of resistance in landraces and wild relatives, which could be used in potato breeding programs around the world to mitigate the risk of future disease outbreaks

International audience | Two novel major effect loci (Sen4 and Sen5) and several minor effect QTLs for potato wart disease resistance have been mapped. The importance of minor effect loci to bring full resistance to wart disease was investigated. Using the newly identified and known wart disease resistances, a panel of potato breeding germplasm and Solanum wild species was screened. This provided a state-of-the-art "hitch-hikers-guide" of complementary wart disease resistance sources. Potato wart disease, caused by the obligate biotrophic soil-born fungus Synchytrium endobioticum, is the most important quarantine disease of potato. Because of its huge impact on yield, the lack of chemical control and the formation of resting spores with long viability, breeding for resistant varieties combined with strict quarantine measures are the only way to efficiently and durably manage the disease. In this study, we set out to make an inventory of the different resistance sources. Using a Genome-Wide Association Study (GWAS) in the potato breeding genepool, we identified Sen4, associated with pathotypes 2, 6 and 18 resistance. Associated SNPs mapped to the south arm of chromosome 12 and were validated to be linked to resistance in one full-sib population. Also, a bulked segregant analysis combined with a Comparative Subsequence Sets Analysis (CoSSA) resulted in the identification of Sen5, associated with pathotypes 2, 6 and 18 resistance, on the south arm of chromosome 5. In addition to these two major effect loci, the GWAS and CoSSA allowed the identification of several quantitative trait loci necessary to bring full resistance to certain pathotypes. Panels of varieties and Solanum accessions were screened for the presence of Sen1, Sen2, Sen3, Sen4 and Sen5. Combined with pedigree analysis, we could trace back some of these genes to the ancestral resistance donors. This analysis revealed complementary resistance sources and allows elimination of redundancy in wart resistance breeding programs.

International audience | Two novel major effect loci (Sen4 and Sen5) and several minor effect QTLs for potato wart disease resistance have been mapped. The importance of minor effect loci to bring full resistance to wart disease was investigated. Using the newly identified and known wart disease resistances, a panel of potato breeding germplasm and Solanum wild species was screened. This provided a state-of-the-art "hitch-hikers-guide" of complementary wart disease resistance sources. Potato wart disease, caused by the obligate biotrophic soil-born fungus Synchytrium endobioticum, is the most important quarantine disease of potato. Because of its huge impact on yield, the lack of chemical control and the formation of resting spores with long viability, breeding for resistant varieties combined with strict quarantine measures are the only way to efficiently and durably manage the disease. In this study, we set out to make an inventory of the different resistance sources. Using a Genome-Wide Association Study (GWAS) in the potato breeding genepool, we identified Sen4, associated with pathotypes 2, 6 and 18 resistance. Associated SNPs mapped to the south arm of chromosome 12 and were validated to be linked to resistance in one full-sib population. Also, a bulked segregant analysis combined with a Comparative Subsequence Sets Analysis (CoSSA) resulted in the identification of Sen5, associated with pathotypes 2, 6 and 18 resistance, on the south arm of chromosome 5. In addition to these two major effect loci, the GWAS and CoSSA allowed the identification of several quantitative trait loci necessary to bring full resistance to certain pathotypes. Panels of varieties and Solanum accessions were screened for the presence of Sen1, Sen2, Sen3, Sen4 and Sen5. Combined with pedigree analysis, we could trace back some of these genes to the ancestral resistance donors. This analysis revealed complementary resistance sources and allows elimination of redundancy in wart resistance breeding programs.

The development of novel improved varieties adapted to unstable environmental conditions is possible through the genetic diversity of breeding materials. Potato is among the most important food crops worldwide; however, there are still significant hindrances to breeding gains attributed to its autotetraploid and highly heterozygous genome. Bacterial wilt caused by the Ralstonia solanacearum species complex is an important disease affecting potato among many economically important crops worldwide. No cultivated potato genotypes have shown a satisfactory level of resistance to bacterial wilt. Nevertheless, resistance can play a crucial role in effective integrated disease management. To understand the genetic landscape of bacterial wilt resistance in cultivated potato, we evaluated the diversity of 192 accessions from the International Potato Center (CIP) using 9,250 single-nucleotide polymorphisms and their associations with the response to bacterial wilt disease evaluated over two independent trials. Twenty-four accessions showed high resistance throughout both trials. Genetic diversity analysis revealed three major clusters whose subgroups were mostly represented by CIP clones derived from common parents. Genome-wide association analyses identified six major hits: two on chromosome 8 and one on each chromosome 2, 4, 5, and 9. These results facilitate genetic dissection of bacterial wilt resistance and enable marker-assisted breeding in elite genotypes for potato breeding initiatives.

The study in Belarus the most dangerous and quarantine fungus Synchytrium endobioticum (Schilb.) Perc. – potato wart disease agent has shown that the resistance feature is obligatory and ecologically safe method of losses decrease from the disease. The necessity of immunological evaluation of potato breeding material for wart disease resistance is substantiated. Among the potato hybrid material studied for resistance to the (D1) pathotype of wart disease agent from the breeding institutions of Belarus and Russia for the period of 2003-2007 in preliminary first year testing there were 83,9% of resistant samples, the second year -92,4%, in State testing -91.9%. By immunological evaluation for wart disease resistance it is very important to observe conditions favourable for the interaction of a fungus parasite and a host plant. It is determined that the parasitic fungus activity and the susceptible plants reaction on infection becomes weaker by potato planting at later than recommended time

Potato breeding has been performed at the Vokė Branch of the Lithuanian Institute of Agriculture since 1958. The key objective of potato breeding is to produce early potato cultivars immune to wart disease Synchytrium endobioticum (Schilb.), resistant to Globodera rostochiensis (Woll.) pathotype of nematodes and major potato diseases. As a result of the breeding work seven potato cultivars of different maturity have been selected. Based on the high disease and pest resistance records, the cultivars and promising hybrids from this breeding program have been recommended for cultivation on ecological farms.