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Antimicrobial resistance and distribution of tetracycline resistance determinants in Escherichia coli isolated from aquatic birds
2008
Cho, J.K. (Health and Environmental Research Institute, Daegu, Republic of Korea) | Lee, S.M. (Kyungpook National University, Daegu, Republic of Korea) | Kim, K.S. (Kyungpook National University, Daegu, Republic of Korea), E-mail: kimkiseuk@knu.ac.kr
One hundred and sixty nine Escherichia (E.) coli strains isolated from fecal samples of aquatic birds in Geumho river basin and Dalseong park were tested by agar dilution method to determine their susceptibility patterns to 14 antimicrobial agents. The distribution of tetracycline resistance determinants (tetA, tetB, tetC, tetD and tetE) were also examined by PCR in 76 tetracycline-resistant (TC∨r) E. coli isolated. The high resistance was observed in tetracycline, cephalothin and ampicillin (45.0~36.7%). Resistance of E. coli isolates derived from Dalseong park to tetracycline, cephalothin, ampicillin and streptomycin (65.7~44.8%) were significantly higher than those isolated from Geumho river basin (31.4~14.7%). About seventy percent (70.4%) of the strains isolated were resistant to one or more drugs tested. Thirty (39.5%) of 76 TC∨r E. coli isolates which were resistant to one or more drugs transferred all or a part of their resistance patterns to the recipient strain of E. coli J53 by conjugation. All of TC∨r E. coli isolates contained at least one or more of 5 tet genes examined. The most common genes found in these isolates were tetA (60.6%) and followed by tetB (7.9%) and tetC (1.3%). However, tetD and tetD and tetE were ant found in any of the isolates tested. Twenty one (27.6%) of TC∨r E. coli isolates had two determinants, tetA/tetB (20 strains), tetA/tetC (1 strain). And two strains (2.6%) contained three determinants (tetA/tetB/tetC).
Mostrar más [+] Menos [-]Histopathological effects of the nematode Amidostomum acutum on the small intestines of two aquatic birds: Fulica atra and Gallinula chloropus Texto completo
2021
Altaif, K.I. | Mhaisen, F.T. | Mizhir, A.H.
The small intestine of two rallid aquatic birds (Fulica atra Linnaeus, 1758 and Gallinula chloropus (Linnaeus, 1758) from Bahr Al-Najaf depression, southwest of Al-Najaf city, mid-Iraq), were infected with the nematode Amidostomum acutum Seurat, 1918 with a prevalence of 25% and 50%, respectively, and a mean intensity of 24.5 and 30, respectively. The infected birds showed several gross pathological and microscopic lesions in their small intestine due to the infection with this nematode. The gross lesions included hypertrophy in the anterior part of the duodenum and small rough nodules on the small intestine wall. Microscopic lesions included necrosis and shortening of villi with their fullness with inflammatory cells, degeneration of villi, and an increased number of acini at the base of the intestinal villi.
Mostrar más [+] Menos [-]Genotypic characterisation of Avian paramyxovirus type-1 viruses isolated from aquatic birds in Uganda Texto completo
2018
Agnes Wanyana | Kizito K. Mugimba | Omony J. Bosco | Halid Kirunda | Jessica L. Nakavuma | Angélique Teillaud | Mariette F. Ducatez | Denis K. Byarugaba
Genotypic characterisation of Avian paramyxovirus type-1 viruses isolated from aquatic birds in Uganda Texto completo
2018
Agnes Wanyana | Kizito K. Mugimba | Omony J. Bosco | Halid Kirunda | Jessica L. Nakavuma | Angélique Teillaud | Mariette F. Ducatez | Denis K. Byarugaba
Avian paramyxovirus type-1 (APMV-1) viruses of the lentogenic pathotypes are often isolated from wild aquatic birds and may mutate to high pathogenicity when they cross into poultry and cause debilitating Newcastle disease. This study characterised AMPV-1 isolated from fresh faecal droppings from wild aquatic birds roosting sites in Uganda. Fresh faecal samples from wild aquatic birds at several waterbodies in Uganda were collected and inoculated into 9–10-day-old embryonated chicken eggs. After isolation, the viruses were confirmed as APMV-1 by APMV-1-specific polymerase chain reaction (PCR). The cleavage site of the fusion protein gene for 24 representative isolates was sequenced and phylogenetically analysed and compared with representative isolates of the different APMV-1 genotypes in the GenBank database. In total, 711 samples were collected from different regions in the country from which 72 isolates were recovered, giving a prevalence of 10.1%. Sequence analysis of 24 isolates revealed that the isolates were all lentogenic, with the typical 111GGRQGR’L117 avirulent motif. Twenty-two isolates had similar amino acid sequences at the cleavage site, which were different from the LaSota vaccine strain by a silent nucleotide substitution T357C. Two isolates, NDV/waterfowl/Uganda/MU150/2011 and NDV/waterfowl/Uganda/MU186/2011, were different from the rest of the isolates in a single amino acid, with aspartate and alanine at positions 124 and 129, respectively. The results of this study revealed that Ugandan aquatic birds indeed harbour APMV-1 that clustered with class II genotype II strains and had limited genetic diversity.
Mostrar más [+] Menos [-]Genotypic characterisation of Avian paramyxovirus type-1 viruses isolated from aquatic birds in Uganda Texto completo
2018
Wanyana, Agnes(Makerere University College of Veterinary Medicine) | Mugimba, Kizito K.(Makerere University College of Veterinary Medicine) | Bosco, Omony J(Makerere University College of Veterinary Medicine) | Kirunda, Halid(National Livestock Resources Research Institute) | Nakavuma, Jessica L.(Makerere University College of Veterinary Medicine) | Teillaud, Angélique(Université de Toulouse Interactions Hôtes-Agents Pathogènes ,École Nationale Vétérinaire de Toulouse) | Ducatez, Mariette F.(Université de Toulouse Interactions Hôtes-Agents Pathogènes ,École Nationale Vétérinaire de Toulouse) | Byarugaba, Denis K.(Makerere University College of Veterinary Medicine)
Avian paramyxovirus type-1 (APMV-1) viruses of the lentogenic pathotypes are often isolated from wild aquatic birds and may mutate to high pathogenicity when they cross into poultry and cause debilitating Newcastle disease. This study characterised AMPV-1 isolated from fresh faecal droppings from wild aquatic birds roosting sites in Uganda. Fresh faecal samples from wild aquatic birds at several waterbodies in Uganda were collected and inoculated into 9-10-day-old embryonated chicken eggs. After isolation, the viruses were confirmed as APMV-1 by APMV-1-specific polymerase chain reaction (PCR). The cleavage site of the fusion protein gene for 24 representative isolates was sequenced and phylogenetically analysed and compared with representative isolates of the different APMV-1 genotypes in the GenBank database. In total, 711 samples were collected from different regions in the country from which 72 isolates were recovered, giving a prevalence of 10.1%. Sequence analysis of 24 isolates revealed that the isolates were all lentogenic, with the typical 111GGRQGR'L117 avirulent motif. Twenty-two isolates had similar amino acid sequences at the cleavage site, which were different from the LaSota vaccine strain by a silent nucleotide substitution T357C. Two isolates, NDV/waterfowl/Uganda/MU150/2011 and NDV/waterfowl/Uganda/MU186/2011, were different from the rest of the isolates in a single amino acid, with aspartate and alanine at positions 124 and 129, respectively. The results of this study revealed that Ugandan aquatic birds indeed harbour APMV-1 that clustered with class II genotype II strains and had limited genetic diversity.
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