The dissemination of antibiotic resistance (AR) has attracted global attention because of the increasing antibiotic treatment failure it has caused. Through natural transformation, a live bacterium takes up extracellular DNA (exDNA), which facilitates AR dissemination. However, recovery of exDNA from water samples is challenging. In this study, we validated a consecutive ultrafiltration-based protocol to simultaneously recover intracellular DNA (inDNA), dissolved exDNA (Dis_exDNA, dissolved in the bulk water), and adsorbed exDNA (Ads_exDNA, adsorbed to the surfaces of suspended particles). Using hollow fiber ultrafiltration (HFUF), all DNA fractions were concentrated from environmental water samples, after which Dis_exDNA (supernatant) was separated from inDNA and Ads_exDNA (pellets) using centrifugation. Ads_exDNA was washed off from the pellets with proteinase K and sodium phosphate buffer. Dis_exDNA and Ads_exDNA were further concentrated using centrifugal ultrafiltration, from which silica binding was performed. inDNA was extracted from washed pellets with a commercial kit. For inDNA, HFUF showed recovery efficiencies of 96.5 ± 18.5% and 88.0 ± 2.0% for total cells and cultured Escherichia coli, respectively (n = 3). To represent all possible DNA fragments in water environment, exDNA with different lengths (10.0, 4.0, 1.0, and 0.5 kbp) were spiked to test the recovery efficiencies for Dis_exDNA. The whole process achieved 62.2%–62.9% recovery for 10 and 4 kbp exDNA, and 38.8%–44.5% recovery for 1.0 and 0.5 kbp exDNA. Proteinase K treatment enhanced the recovery of Ads_exDNA by 4.0–10.7 times. The protocol was applied to water samples from an urban river in Tokyo, Japan. The abundance of AR genes (ARGs) in inDNA, Dis_exDNA, and Ads_exDNA increased downstream of wastewater treatment plants. ARGs in Ads_exDNA and Dis_exDNA accounted for 1.8%–26.7% and 0.03%–20.9%, respectively, of the total DNA, implying that Ads_exDNA and Dis_exDNA are nonnegligible potential pools for the horizontal transfer of ARGs.

Supported carbon quantum dots (CQDs), used as fluorescent sensors for the detection of metal ions, have rarely been used to remove heavy metals from water. Nitrogen-doped CQDs immobilized in hydrophilic silica hydrogels exhibited a more superior sensitivity and selectivity for the detection of Re(VII) and Cr(VI) than other metal ions, including Fe(III), Fe(II), Zn(II), Cu(II) and Mn(II). For the first time, low limits of detection (LOD) of 2.3 μM for Re(VII) detection and 65 nM for Cr(VI) detection were reported by a facile method. Based on the high selectivity of fluorescent silica hydrogels for Re(VII) and Cr(VI) detection, the removal of Re(VII) and Cr(VI) by graphene oxide (GO) in water was monitored with the hydrogels used as a turn-off fluorescent sensing platform. The consistent results of the sorption isotherms of each metal on GO, which were obtained from the fluorescence spectra and by UV absorption, further verified the possibility of monitoring metal removal by fluorescence detection. Remarkably, GO removed 1186 mg/g of Re(VII) but only 178 mg/g of Cr(VI). The density functional theory (DFT) calculations indicated that both Re(VII) and Cr(VI) formed stable bonds with silica hydrogels, confirming that the interactions between the metal ions and the substrate would promote the fluorescence quenching of the supported CQDs. On the other hand, Re(VII) interacted more strongly with the carboxyl groups of GO than Cr(VI). In addition, a real-time detection system was designed to alarm the service life of a GO filter used for Re(VII) removal.

Waste date palm-derived biochar (DPBC) was modified with nano-zerovalent iron (BC-ZVI) and silica (BC-SiO₂) through mechanochemical treatments and evaluated for arsenate (As(V)) removal from water. The feedstock and synthesized adsorbents were characterized through proximate, ultimate, and chemical analyses for structural, surface, and mineralogical compositions. BC-ZVI demonstrated the highest surface area and contents of C, N, and H. A pH range of 2–6 was optimum for BC-ZVI (100% removal), 3–6 for DPBC (89% removal), and 4–6 for BC-SiO₂ (18% removal). Co-occurring PO₄³⁻ and SO₄²⁻ ions showed up to 100% reduction, while NO₃⁻ and Cl⁻ ions resulted in up to 26% reduction in As(V) removal. Fitness of the Langmuir, Freundlich and Redlich-Peterson isotherms to As(V) adsorption data suggested that both mono- and multi-layer adsorption processes occurred. BC-ZVI showed superior performance by demonstrating the highest Langmuir maximum adsorption capacity (26.52 mg g⁻¹), followed by DPBC, BC-SiO₂, and commercial activated carbon (AC) (7.33, 5.22, and 3.28 mg g⁻¹, respectively). Blockage of pores with silica particles in BC-SiO₂ resulted in lower As(V) removal than that of DPBC. Pseudo-second-order kinetic model fitted well with the As(V) adsorption data (R² = 0.99), while the Elovich, intraparticle diffusion, and power function models showed a moderate fitness (R² = 0.53–0.93). The dynamics of As(V) adsorption onto the tested adsorbents exhibited the highest adsorption rates for BC-ZVI. As(V) adsorption onto the tested adsorbents was confirmed through post-adsorption FTIR, SEM-EDS, and XRD analyses. Adsorption of As(V) onto DPBC, BC-SiO₂, and AC followed electrostatic interactions, surface complexation, and intraparticle diffusion, whereas, these mechanisms were further abetted by the higher surface area, nano-sized structure, and redox reactions of BC-ZVI.

Because of the complexity of contaminants infiltrating groundwater, it is necessary to study the co-transport of contaminants in the vadose and saturated zones. To investigate the role of inorganic colloids in the transport of biocolloids through porous media, a series of experiments were performed using columns packed with sand. The Escherichia coli phage (E. coli phage) was used as the model virus and silica as the model colloid in this study. The model virus exhibited a higher degree of attachment when compared with silica under similar experimental conditions. Under unsaturated flow conditions, the degree of virus retention was higher than in the corresponding saturated flow case, regardless of the presence of silica. Mass recovery and breakthrough curve data showed that silica hindered virus transport in saturated porous media. The model virus exhibited a higher degree of retention in the presence of silica. This could be related to pore structure changes caused by aggregated virus-silica particles located within the pores of the sand. Conversely, the suspended virus retained at the air-water interface provided new retention sites for other colloids; the retention was observed to be higher in the presence of colloidal silica in the saturated columns. In the corresponding unsaturated experiments, silica was observed to play the opposite function with respect to virus transport, which demonstrated that silica facilitated virus transport in the presence of unsaturated porous media. Capillary forces were stronger than the virus-silica interactions, and inhibited the aggregation of particles. Suspended silica competes with the virus for sorption sites because of a high affinity for the air-water interface. This competition inhibits virus retention by electrostatic repulsion of like-charged particles, and concomitantly facilitates virus transport under unsaturated conditions.

Silica nanoparticles (SiNPs) can reduce both quality and quantity of sperm via inhibiting the progress of meiosis and mitosis and inducing apoptosis of spermatogenic cells, however, their specific mechanism and effects on the later stage of spermatogenesis are still unclear. To investigate the effects of SiNPs on the reproductive system, male mice were treated with SiNPs (0, 1.25, 5 and 20 mg/kg.bw) via intratracheal instillation once every 3 days and for a total of 15 days. Results revealed that exposure to SiNPs induced reduction in the rate of sperm activity, histological abnormalities in seminiferous epithelium as well as apoptosis of spermatogenic cells, which are associated with decreased level of Lethal (3) malignant brain tumor like 2 (L3MBTL2) and activation of DNA damage-p53-mitochondrial apoptosis pathways. Moreover, reduction in L3MBTL2 level caused by SiNPs also led to the lower expression of RNF8-ubH2A/ubH2B pathway, thus resulting in incomplete histone-to-protamine exchange. These results suggest that the inhibition of L3MBTL2 expression caused by SiNPs not only activates DNA damage-p53-mitochondrial apoptosis pathway leading to the apoptosis of spermatogenic cells, but also inhibits RNF8-ubH2A/ubH2B pathway resulting in incomplete histone-to-protamine exchange, thereby affected spermatogenesis. This indicates that L3MBTL2 plays an important role in reproductive toxicity of males caused by SiNPs.

Though the main toxic mechanisms of graphene oxide (GO) to algae have been accepted as the shading effect, oxidative stress and mechanical damage, the effect of algal characteristics on these three mechanisms of GO toxicity have seldom been taken into consideration. In this study, we investigated GO toxicity to green algae (Chlorella vulgaris, Scenedesmus obliquus, Chlamydomonas reinhardtii), cyanobacteria (Microcystis aeruginosa) and diatoms (Cyclotella sp.). The aim was to assess how the physiological characteristics of algae affect the toxicity of GO. Results showed that 10 mg/L of GO significantly inhibited the growth of all tested algal types, while S. obliquus and C. reinhardtii were found to be the most susceptible and tolerant species, respectively. Then, scanning electron microscopy (SEM) and transmission electron microscopy (TEM) were used to observe the physiological characteristics of the assessed algae. The presence of locomotive organelles, along with smaller and more spherical cells, was more likely to alleviate the shading effect. Variations in cell wall composition led to different extents of mechanical damage as shown by Cyclotella sp. silica frustules and S. obliquus autosporine division being prone to damage. Meanwhile, growth inhibition and cell division were significantly correlated with the oxidative stress and membrane permeability, suggesting the latter two indicators can effectively signal GO toxicity to algae. The findings of this study provide novel insights into the toxicity of graphene materials in aquatic environments.

A simple, sensitive and effective method was developed and validated for selective adsorption and quantitation of norfloxacin (NFX) from marine sediments and seawater samples using the novel molecularly imprinted silica polymers as sorbents followed by high-performance liquid chromatographic analysis with diode array detection (HPLC-DAD). The imprinted particles were characterized by different techniques and the molecular recognition for NFX was also investigated. Several parameters affecting the extraction efficiency of molecularly imprinted solid-phase extraction (MISPE) process were optimized. Three sediment and seawater samples from Weihai bay in China were analyzed and the results show that satisfactory recoveries (77.2–98.7%) were achieved in seawater samples with low relative standard deviation (RSD) values less than 6.89% (n = 3), and the recoveries in sediments were in the range of 75.5–91.7%. The limits of detection are respectivley 2 μg L⁻¹ in seawater samples and 5 μg kg⁻¹ in sediments.

Sediment cores were analyzed from the continental shelf of the northwestern South China Sea aiming to understand the change history of primary productivity and provide insights into key changes of environmental conditions in this region over the past ~100 years. Multiple proxies including stable carbon isotopic composition (δ¹³C) of sedimentary organic matter, diatom abundance and biogenic silica burial flux were applied along with ²¹⁰Pb chronology. Notably, these independent evidences consistently point to a steady increase of primary production in this region only after ~1960s. We propose that increasing atmospheric deposition due to dramatically enhanced human activities especially from China supplies essential nitrogen nutrients to the N-poor region and probably acts a major reason for the observed enhancement of marine primary production. Our study provides insights into better understanding how human perturbation may have profoundly impacted biogeochemical cycling in marginal seas in the last decades.

“Innovative actions towards a pollution free-planet” is a goal of the United Nations Environment Assembly (UNEA). Aided by both the Food and Agricultural Organisation (FAO) and its Global Soil Partnership under the 3rd UNEA resolution, a consensus from > 170 countries have agreed a need for accelerated action and collaboration to combat soil pollution. This initiative has been tasked to find new and improved solutions to prevent and reduce soil pollution, and it is in this context that this review provides an updated perspective on an emerging technology platform that has already provided demonstrable utility for measurement, mapping, and monitoring of toxic trace elements (TTEs) in soils, in addition to the entrapment, removal, and remediation of pollutant sources. In this article, the development and characteristics of functionalized mesoporous silica nanomaterials (FMSN) will be discussed and compared with other common metal scavenging materials. The chemistries of the common functionalizations will be reviewed, in addition to providing an outlook on some of the future directions/applications of FMSN. The use of FMSN in soil will be considered with some specific case studies focusing on Hg and As. Finally, the advantages and developments of FMSN in the widely used diffusive gradients-in-thin films (DGT) technique will be discussed, in particular, its advantages as a DGT substrate for integration with oxygen planar optodes in multilayer systems that provide 2D mapping of metal pollutant fluxes at submillimeter resolution, which can be used to measure detailed sediment-water fluxes as well as soil-root interactions, to predict plant uptake and bioavailability.

A new eco-friendly compound was prepared for the treatment of textile wastewater containing mixed dyes with various ranges of toxicity. Porous silica was extracted from a black liquor by-product using a simple method and characterized by porous morphology (the pore size ranged between 12 and 41 nm). The silica is the main corrosive agent present in the black liquor; thus, the extraction of silica from the black liquor was considered detoxification process. The extracted porous silica was used as a precursor material to prepare the hybrid material based on polyvinyl alcohol (PVA) as a binder polymer and functionalized by nicotinic acid. The multifunction prepared hybrid was characterized by FT-IR, TGA, DTGA, SEM, and EDX. The porous size of the prepared hybrid varied from 96 nm to 620 nm and presents a high thermal stability in comparison with its parent materials. The adsorption of cationic and anionic dyes was carried out. The adsorption kinetics parameters were fitted with pseudo-first-order and pseudo-second-order kinetic models for methyl orange (MO) and methylene blue (MB), respectively. The adsorption parameters indicated that the Langmuir model is better to describe the adsorption of dyes on the hybrid material. The maximum adsorption capacity was 484 and 771 mg/g for MO and MB, respectively.