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Investigating the Effect of Medicago sativa L. and Trifolium pratense L. Root Exudates on PAHs Bioremediation in an Aged-Contaminated Soil Texto completo
2019
Davin, Marie | Starren, Amandine | Marit, Emilie | Lefébure, Kévin | Fauconnier, Marie-Laure | Colinet, Gilles
Investigating the Effect of Medicago sativa L. and Trifolium pratense L. Root Exudates on PAHs Bioremediation in an Aged-Contaminated Soil Texto completo
2019
Davin, Marie | Starren, Amandine | Marit, Emilie | Lefébure, Kévin | Fauconnier, Marie-Laure | Colinet, Gilles
peer reviewed | Polycyclic aromatic hydrocarbons (PAH) are persistent organic compounds of major concern that accumulate in the environment, especially soils, and require remediation. Researches to develop bioremediation and phytoremediation (alternative eco-friendly technologies) are being conducted. First, a bioaccessibility measurement protocol was adapted to a brownfield soil using Tenax® beads in order to compare PAHs bioaccessibility in soil samples. PAHs desorption kinetics were established, described by a site distribution model, and a common extraction time was calculated (48 h). Second, the role of two Fabaceae (Medicago sativa L. or Trifolium pratense L.) root exudates in enhancing PAHs bioaccessibility and biodegradation in the studied soil was evaluated during microcosms experiments (28 °C). The CO2 emissions were significantly higher in presence of T. pratense exudates; the dehydrogenase activities showed improvements of the soil microbial activity in presence of two types of root exudates compared to untreated soil samples; the PAHs residual contents decreased more in untreated samples than in the presence of T. pratense exudates; and M. sativa exudates lowered PAHs bioaccessibility but not residual contents.
Mostrar más [+] Menos [-]Investigating the Effect of Medicago sativa L. and Trifolium pratense L. Root Exudates on PAHs Bioremediation in an Aged-Contaminated Soil Texto completo
2019
Davin, Marie | Starren, Amandine | Marit, Emilie | Lefébure, Kévin | Fauconnier, Marie-Laure | Colinet, Gilles
Polycyclic aromatic hydrocarbons (PAH) are persistent organic compounds of major concern that accumulate in the environment, especially soils, and require remediation. Researches to develop bioremediation and phytoremediation (alternative eco-friendly technologies) are being conducted. First, a bioaccessibility measurement protocol was adapted to a brownfield soil using Tenax® beads in order to compare PAHs bioaccessibility in soil samples. PAHs desorption kinetics were established, described by a site distribution model, and a common extraction time was calculated (48 h). Second, the role of two Fabaceae (Medicago sativa L. or Trifolium pratense L.) root exudates in enhancing PAHs bioaccessibility and biodegradation in the studied soil was evaluated during microcosms experiments (28 °C). The CO₂ emissions were significantly higher in presence of T. pratense exudates; the dehydrogenase activities showed improvements of the soil microbial activity in presence of two types of root exudates compared to untreated soil samples; the PAHs residual contents decreased more in untreated samples than in the presence of T. pratense exudates; and M. sativa exudates lowered PAHs bioaccessibility but not residual contents.
Mostrar más [+] Menos [-]Assessment of sperm DNA integrity within the Palaemon longirostris (H. Milne-Edwards, 1837) population of the Seine estuary Texto completo
2019
Erraud, Alexandre | Bonnard, Marc | Geffard, Olivier | Chaumot, Arnaud | Duflot, Aurélie | Geffard, Alain | Forget-Leray, Joëlle | Xuereb, Benoît | Stress Environnementaux et BIOsurveillance des milieux aquatiques (SEBIO) ; Institut National de l'Environnement Industriel et des Risques (INERIS)-Université de Reims Champagne-Ardenne (URCA)-Université Le Havre Normandie (ULH) ; Normandie Université (NU)-Normandie Université (NU)-SFR Condorcet ; Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS)-Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS) | RiverLy - Fonctionnement des hydrosystèmes ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA) | project ECOTONES - program Seine-Aval V (Public Interest Groups Seine-Aval) (SA5 QO 2014) | Research Federation CNRS 3730 SCALE | Normandy Region
Assessment of sperm DNA integrity within the Palaemon longirostris (H. Milne-Edwards, 1837) population of the Seine estuary Texto completo
2019
Erraud, Alexandre | Bonnard, Marc | Geffard, Olivier | Chaumot, Arnaud | Duflot, Aurélie | Geffard, Alain | Forget-Leray, Joëlle | Xuereb, Benoît | Stress Environnementaux et BIOsurveillance des milieux aquatiques (SEBIO) ; Institut National de l'Environnement Industriel et des Risques (INERIS)-Université de Reims Champagne-Ardenne (URCA)-Université Le Havre Normandie (ULH) ; Normandie Université (NU)-Normandie Université (NU)-SFR Condorcet ; Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS)-Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS) | RiverLy - Fonctionnement des hydrosystèmes ; Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA) | project ECOTONES - program Seine-Aval V (Public Interest Groups Seine-Aval) (SA5 QO 2014) | Research Federation CNRS 3730 SCALE | Normandy Region
[Departement_IRSTEA]Eaux [ADD1_IRSTEA]Systèmes aquatiques soumis à des pressions multiples | International audience | The interpretation of biomarkers in natura should be based on a referential of expected values in uncontaminated conditions. Nevertheless, to build a reference data set of biomarker responses in estuarine areas, which receive chronic pollution loads due to their transition position between continent and sea, is impossible. In this context, the aim of the present work was to propose the use of laboratory recovery period to define a baseline for the measurement of sperm DNA damage by Comet assay in the estuarine prawn Palaemon longirostris. For that, sperm DNA integrity was observed after both a passive (i.e. 20 days in a clean environment) and an active (i.e. forced renewal of spermatophores) recovery of wild P. longirostris specimens from the Seine estuary, in laboratory conditions. Then, the levels of sperm DNA damage recorded within the P. longirostris population of the Seine estuary, during six campaigns of sampling from April 2015 to October 2017, have been interpreted according to the defined threshold values. The results showed a persistence in the level of DNA damage after 20-day in clean environment with the passive recovery. This strategy was inconclusive to reach a baseline level but it revealed the lack of DNA repair mechanisms. For the active recovery, a decrease of 54% of the level of DNA damage has been observed after the first renewal of spermatophores and this level stabilized after the second renewal. On the basis of this second strategy, we defined a mean basal value of sperm DNA damage of 54.9 A.U. and a maximum threshold of 69.7 A.U. (i.e. 95 %CI). The analysis of the results using the reference value highlighted significant abnormal sperm DNA damage within the native population of P. longirostris from the Seine estuary on all stations during the six-sampling campaigns.
Mostrar más [+] Menos [-]Assessment of sperm DNA integrity within the Palaemon longirostris (H. Milne-Edwards, 1837) population of the Seine estuary Texto completo
2019
Erraud, Alexandre | Bonnard, Marc | Geffard, Olivier | Chaumot, Arnaud | Duflot, Aurélie | Geffard, Alain | Forget-Leray, Joëlle | Xuereb, Benoit
The interpretation of biomarkers in natura should be based on a referential of expected values in uncontaminated conditions. Nevertheless, to build a reference data set of biomarker responses in estuarine areas, which receive chronic pollution loads due to their transition position between continent and sea, is impossible. In this context, the aim of the present work was to propose the use of laboratory recovery period to define a baseline for the measurement of sperm DNA damage by Comet assay in the estuarine prawn Palaemon longirostris. For that, sperm DNA integrity was observed after both a passive (i.e. 20 days in a clean environment) and an active (i.e. forced renewal of spermatophores) recovery of wild P. longirostris specimens from the Seine estuary, in laboratory conditions. Then, the levels of sperm DNA damage recorded within the P. longirostris population of the Seine estuary, during six campaigns of sampling from April 2015 to October 2017, have been interpreted according to the defined threshold values. The results showed a persistence in the level of DNA damage after 20-day in clean environment with the passive recovery. This strategy was inconclusive to reach a baseline level but it revealed the lack of DNA repair mechanisms. For the active recovery, a decrease of 54% of the level of DNA damage has been observed after the first renewal of spermatophores and this level stabilized after the second renewal. On the basis of this second strategy, we defined a mean basal value of sperm DNA damage of 54.9 A.U. and a maximum threshold of 69.7 A.U. (i.e. 95 %CI). The analysis of the results using the reference value highlighted significant abnormal sperm DNA damage within the native population of P. longirostris from the Seine estuary on all stations during the six-sampling campaigns.
Mostrar más [+] Menos [-]Exploring atmospheric stagnation during a severe particulate matter air pollution episode over complex terrain in Santiago, Chile Texto completo
2019
Toro A., Richard | Kvakic, Marko | Klaić, Zvjezdana B. | Koracin, Darko | Morales S., Raúl G. E. | Leiva G., Manuel A. | Universidad de Chile = University of Chile [Santiago] (UCHILE) | Interactions Sol Plante Atmosphère (UMR ISPA) ; Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro) | University of Zagreb | Division of Atmospheric Sciences ; Desert Research Institute | University of Split = Université de Split (UNIST)
Exploring atmospheric stagnation during a severe particulate matter air pollution episode over complex terrain in Santiago, Chile Texto completo
2019
Toro A., Richard | Kvakic, Marko | Klaić, Zvjezdana B. | Koracin, Darko | Morales S., Raúl G. E. | Leiva G., Manuel A. | Universidad de Chile = University of Chile [Santiago] (UCHILE) | Interactions Sol Plante Atmosphère (UMR ISPA) ; Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro) | University of Zagreb | Division of Atmospheric Sciences ; Desert Research Institute | University of Split = Université de Split (UNIST)
International audience | A severe air quality degradation event occurred in the Santiago Metropolitan Area (SMA), Chile, in June 2014. Meteorological and air quality measurements from 11 stations in the area as well as numerical simulations using the Weather and Research Forecasting (WRF) model were used to explain the main reasons for the occurrence of elevated particulate matter (PM) concentrations. The conditions were characterized with formation of a coastal low in central Chile between the southeastern anticyclone and a high-pressure system over Argentina. At a local scale, these conditions generated a depression at the base of the inversion layer, an increase in the vertical thermal stability, lower humidity and low-wind conditions, which were conducive to a decrease in pollutant dispersion and insufficient ventilation of the polluted air. Measurements and simulations using the WRF model revealed a vertical structure of the boundary layer during these stagnant conditions and provided a basis for a trajectory analysis. The back-trajectory calculation showed that the transport of air parcels was contained in the valley during the highest concentrations. The analysis also enabled the definition of the threshold values of a simple indicator of air pollution (ventilation coefficient, VC), which confirmed the evolution of the episode and divided the observed daily concentrations into two groups, with one including values above the limits prescribed by the national air quality standards (NAQS) and the other including values below these limits. For the SMA, the daily PM concentrations above the NASQ limits were associated with an overall mean threshold value of VC below 500 m2 s−1 (for PM2.5) and 300 m2 s−1 (for PM10). To apply the VC analysis to other pollutants and different geographic locations, different threshold values should be evaluated.
Mostrar más [+] Menos [-]Exploring atmospheric stagnation during a severe particulate matter air pollution episode over complex terrain in Santiago, Chile Texto completo
2019
Toro A, Richard | Kvakić, Marko | Klaić, Zvjezdana B. | Koračin, Darko | Morales S, Raúl G.E. | Leiva G, Manuel A.
A severe air quality degradation event occurred in the Santiago Metropolitan Area (SMA), Chile, in June 2014. Meteorological and air quality measurements from 11 stations in the area as well as numerical simulations using the Weather and Research Forecasting (WRF) model were used to explain the main reasons for the occurrence of elevated particulate matter (PM) concentrations. The conditions were characterized with formation of a coastal low in central Chile between the southeastern anticyclone and a high-pressure system over Argentina. At a local scale, these conditions generated a depression at the base of the inversion layer, an increase in the vertical thermal stability, lower humidity and low-wind conditions, which were conducive to a decrease in pollutant dispersion and insufficient ventilation of the polluted air. Measurements and simulations using the WRF model revealed a vertical structure of the boundary layer during these stagnant conditions and provided a basis for a trajectory analysis. The back-trajectory calculation showed that the transport of air parcels was contained in the valley during the highest concentrations. The analysis also enabled the definition of the threshold values of a simple indicator of air pollution (ventilation coefficient, VC), which confirmed the evolution of the episode and divided the observed daily concentrations into two groups, with one including values above the limits prescribed by the national air quality standards (NAQS) and the other including values below these limits. For the SMA, the daily PM concentrations above the NASQ limits were associated with an overall mean threshold value of VC below 500 m² s⁻¹ (for PM₂.₅) and 300 m² s⁻¹ (for PM₁₀). To apply the VC analysis to other pollutants and different geographic locations, different threshold values should be evaluated.
Mostrar más [+] Menos [-]A methodological framework for identifying potential sources of soil heavy metal pollution based on machine learning: A case study in the Yangtze Delta, China Texto completo
2019
Jia, Xiaolin | Hu, Bifeng | Marchant, Ben P. | Zhou, Lianqing | Shi, Zhou | Zhu, Youwei | Zhejiang University [Hangzhou, China] | Unité de Science du Sol (Orléans) (URSols) ; Institut National de la Recherche Agronomique (INRA) | InfoSol (InfoSol) ; Institut National de la Recherche Agronomique (INRA) | British Geological Survey (BGS) | Ministry of Agriculture
A methodological framework for identifying potential sources of soil heavy metal pollution based on machine learning: A case study in the Yangtze Delta, China Texto completo
2019
Jia, Xiaolin | Hu, Bifeng | Marchant, Ben P. | Zhou, Lianqing | Shi, Zhou | Zhu, Youwei | Zhejiang University [Hangzhou, China] | Unité de Science du Sol (Orléans) (URSols) ; Institut National de la Recherche Agronomique (INRA) | InfoSol (InfoSol) ; Institut National de la Recherche Agronomique (INRA) | British Geological Survey (BGS) | Ministry of Agriculture
International audience | It is a great challenge to identify the many and varied sources of soil heavy metal pollution. Often little information is available regarding the anthropogenic factors and enterprises that could potentially pollute soils. In this study we use freely available geographical data from a search engine in conjunction with machine learning methodologies to identify and classify potentially polluting enterprises in the Yangtze Delta, China. The data were classified into 31 separate and four integrated industry types by five different machine learning approaches. Multinomial naive Bayesian (NB) methods achieved an accuracy of 87% and Kappa coefficient of 0.82 and were used to classify the geographic data from more than 260,000 enterprises. The relationship between the different industry classes and measurements of soil cadmium (Cd) and mercury (Hg) concentrations was explored using bivariate local Moran's I analysis. The analysis revealed areas where different industry classes had led to soil pollution. In the case of Cd, elevated concentrations also occurred in some areas because of excessive fertilization and coal mining. This study provides a new approach to investigate the interaction between anthropogenic pollution and natural sources of soil heavy metals to inform pollution control and planning decisions regarding the location of industrial sites. (C) 2019 Elsevier Ltd. All rights reserved.
Mostrar más [+] Menos [-]A methodological framework for identifying potential sources of soil heavy metal pollution based on machine learning: A case study in the Yangtze Delta, China Texto completo
2019
Jia, Xiaolin | Hu, Bifeng | Marchant, Ben P. | Zhou, Lianqing | Shi, Zhou | Zhu, Youwei
It is a great challenge to identify the many and varied sources of soil heavy metal pollution. Often little information is available regarding the anthropogenic factors and enterprises that could potentially pollute soils. In this study we use freely available geographical data from a search engine in conjunction with machine learning methodologies to identify and classify potentially polluting enterprises in the Yangtze Delta, China. The data were classified into 31 separate and four integrated industry types by five different machine learning approaches. Multinomial naive Bayesian (NB) methods achieved an accuracy of 87% and Kappa coefficient of 0.82 and were used to classify the geographic data from more than 260,000 enterprises. The relationship between the different industry classes and measurements of soil cadmium (Cd) and mercury (Hg) concentrations was explored using bivariate local Moran's I analysis. The analysis revealed areas where different industry classes had led to soil pollution. In the case of Cd, elevated concentrations also occurred in some areas because of excessive fertilization and coal mining. This study provides a new approach to investigate the interaction between anthropogenic pollution and natural sources of soil heavy metals to inform pollution control and planning decisions regarding the location of industrial sites.
Mostrar más [+] Menos [-]Determining suitable fish to monitor plastic ingestion trends in the Mediterranean Sea Texto completo
2019
Bray, Laura | Digka, Nikoletta | Tsangaris, Catherine | Camedda, Andrea | Gambaiani, Delphine | de Lucia, Giuseppe Andrea | Matiddi, Marco | Miaud, Claude | Palazzo, Luca | Pérez-Del-Olmo, Ana | Raga, Juan Antonio | Silvestri, Cecilia | Kaberi, Helen | Centre d’Ecologie Fonctionnelle et Evolutive (CEFE) ; Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Occitanie])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
Determining suitable fish to monitor plastic ingestion trends in the Mediterranean Sea Texto completo
2019
Bray, Laura | Digka, Nikoletta | Tsangaris, Catherine | Camedda, Andrea | Gambaiani, Delphine | de Lucia, Giuseppe Andrea | Matiddi, Marco | Miaud, Claude | Palazzo, Luca | Pérez-Del-Olmo, Ana | Raga, Juan Antonio | Silvestri, Cecilia | Kaberi, Helen | Centre d’Ecologie Fonctionnelle et Evolutive (CEFE) ; Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Occitanie])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
International audience
Mostrar más [+] Menos [-]Determining suitable fish to monitor plastic ingestion trends in the Mediterranean Sea Texto completo
2019
Bray, Laura | Digka, Nikoletta | Tsangaris, Catherine | Camedda, Andrea | Gambaiani, Delphine | de Lucia, Giuseppe Andrea | Matiddi, Marco | Miaud, Claude | Palazzo, Luca | Pérez-del-Olmo, Ana | Raga, Juan Antonio | Silvestri, Cecilia | Kaberi, Helen
The presence of marine litter is a complex, yet persistent, threat to the health and biodiversity of the marine environment, and plastic is the most abundant, and ubiquitous type of marine litter. To monitor the level of plastic waste in an area, and the prospect of it entering the food chain, bioindicator species are used extensively throughout Northern European Seas, however due to their distribution ranges many are not applicable to the Mediterranean Sea. Guidance published for the Marine Strategy Framework Directive suggests that the contents of fish stomachs may be analyzed to determine trends of marine plastic ingestion. In order to equate transnational trends in marine plastic ingestion, the use of standardized fish species that widely occur throughout the basin is favoured, however for the Mediterranean Sea, specific species are not listed. Here we propose a methodology to assess how effective Mediterranean fish species, that are known to have ingested marine plastic, are as bioindicators. A new Bioindicator Index (BI) was established by incorporating several parameters considered important for bioindicators. These parameters included species distribution throughout the Mediterranean basin, several life history traits, the commercial value of each species, and the occurrence of marine litter in their gut contents. By collecting existing data for Mediterranean fish, ranked scores were assigned to each trait and an average value (BI value) was calculated for each species. Based on their habitat preferences, Engraulis encrasicolus (pelagic), Boops boops (benthopelagic), three species of Myctophidae (Hygophum benoiti, Myctophum punctatum and Electrona risso) (mesopelagic), Mullus barbatus barbartus (demersal) and Chelidonichthys lucerna (benthic), were identified as currently, the most suitable fish for monitoring the ingestion of marine plastics throughout the Mediterranean basin. The use of standardized indicator species will ensure coherence in the reporting of marine litter ingestion trends throughout the Mediterranean Sea.
Mostrar más [+] Menos [-]Exploring atmospheric stagnation during a severe particulate matter air pollution episode over complex terrain in Santiago, Chile Texto completo
2019
Toro A., Richard | Kvakic, Marko | Klaić, Zvjezdana B. | Koracin, Darko | Morales S., Raúl G. E. | Leiva G., Manuel A. | Universidad de Chile = University of Chile [Santiago] (UCHILE) | Interactions Sol Plante Atmosphère (UMR ISPA) ; Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro) | University of Zagreb | Division of Atmospheric Sciences ; Desert Research Institute | University of Split
International audience | A severe air quality degradation event occurred in the Santiago Metropolitan Area (SMA), Chile, in June 2014. Meteorological and air quality measurements from 11 stations in the area as well as numerical simulations using the Weather and Research Forecasting (WRF) model were used to explain the main reasons for the occurrence of elevated particulate matter (PM) concentrations. The conditions were characterized with formation of a coastal low in central Chile between the southeastern anticyclone and a high-pressure system over Argentina. At a local scale, these conditions generated a depression at the base of the inversion layer, an increase in the vertical thermal stability, lower humidity and low-wind conditions, which were conducive to a decrease in pollutant dispersion and insufficient ventilation of the polluted air. Measurements and simulations using the WRF model revealed a vertical structure of the boundary layer during these stagnant conditions and provided a basis for a trajectory analysis. The back-trajectory calculation showed that the transport of air parcels was contained in the valley during the highest concentrations. The analysis also enabled the definition of the threshold values of a simple indicator of air pollution (ventilation coefficient, VC), which confirmed the evolution of the episode and divided the observed daily concentrations into two groups, with one including values above the limits prescribed by the national air quality standards (NAQS) and the other including values below these limits. For the SMA, the daily PM concentrations above the NASQ limits were associated with an overall mean threshold value of VC below 500 m2 s−1 (for PM2.5) and 300 m2 s−1 (for PM10). To apply the VC analysis to other pollutants and different geographic locations, different threshold values should be evaluated.
Mostrar más [+] Menos [-]The response profile to chronic radiation exposure based on the transcriptome analysis of Scots pine from Chernobyl affected zone Texto completo
2019
Duarte, Gustavo | Volkova Yu, Polina | Institut Jean-Pierre Bourgin (IJPB) ; Institut National de la Recherche Agronomique (INRA)-AgroParisTech | Russian Institute of Radiology and Agroecology ; Partenaires INRAE | Russian Science FoundationRussian Science Foundation (RSF) [14-14-00666]; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [18-34-20012]
The response profile to chronic radiation exposure based on the transcriptome analysis of Scots pine from Chernobyl affected zone Texto completo
2019
Duarte, Gustavo | Volkova Yu, Polina | Institut Jean-Pierre Bourgin (IJPB) ; Institut National de la Recherche Agronomique (INRA)-AgroParisTech | Russian Institute of Radiology and Agroecology ; Partenaires INRAE | Russian Science FoundationRussian Science Foundation (RSF) [14-14-00666]; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [18-34-20012]
International audience | Radioactive contamination of the natural areas is one of the most long-lasting anthropogenic impacts on the environment. Scots pine (Pinus sylvestris L.) is a promising organism for radiation-related research because of its high radiosensitivity, but the genome size of Pinacea species has imposed obstacles for high-throughput studies so far. In this work, we conducted the analysis of the de novo assembled transcriptome of Scots pine populations growing in the Chernobyl-affected zone, which is still today contaminated with radionuclides because of the accident at the nuclear power plant in 1986. The transcriptome profiles indicate a clear pattern of adaptive stress response, which seems to be dose-dependent. The transcriptional response indicates a continuous modulation of the cellular redox system, enhanced expression of chaperones and histones, along with the control of ions balance. Interestingly, the activity of transposable element families is inversely correlated to the exposure levels to radiation. These adaptive responses, which are triggered by radiation doses 30 times lower than the one accepted as a safe for biota species by international regulations, suggest that the environmental management in radiation protection should be reviewed.
Mostrar más [+] Menos [-]The response profile to chronic radiation exposure based on the transcriptome analysis of Scots pine from Chernobyl affected zone Texto completo
2019
Duarte, Gustavo T. | Volkova, Polina Yu | Geras'kin, Stanislav A.
Radioactive contamination of the natural areas is one of the most long-lasting anthropogenic impacts on the environment. Scots pine (Pinus sylvestris L.) is a promising organism for radiation-related research because of its high radiosensitivity, but the genome size of Pinacea species has imposed obstacles for high-throughput studies so far. In this work, we conducted the analysis of the de novo assembled transcriptome of Scots pine populations growing in the Chernobyl-affected zone, which is still today contaminated with radionuclides because of the accident at the nuclear power plant in 1986. The transcriptome profiles indicate a clear pattern of adaptive stress response, which seems to be dose-dependent. The transcriptional response indicates a continuous modulation of the cellular redox system, enhanced expression of chaperones and histones, along with the control of ions balance. Interestingly, the activity of transposable element families is inversely correlated to the exposure levels to radiation. These adaptive responses, which are triggered by radiation doses 30 times lower than the one accepted as a safe for biota species by international regulations, suggest that the environmental management in radiation protection should be reviewed.
Mostrar más [+] Menos [-]Different stories told by small and large microplastics in sediment - first report of microplastic concentrations in an urban recipient in Norway Texto completo
2019
Haave, Marte | Lorenz, Claudia | Primpke, Sebastian | Gerdts, Gunnar
Different stories told by small and large microplastics in sediment - first report of microplastic concentrations in an urban recipient in Norway Texto completo
2019
Haave, Marte | Lorenz, Claudia | Primpke, Sebastian | Gerdts, Gunnar
Microplastics (MP) in sediments from discharge sites for wastewater and deposition sites in deep regions in an urban fjord in Norway were extracted by density separation in a Microplastic Sediment Separator with ZnCl2. Particles (>11 μm) were identified using FTIR. Twenty different polymer types were identified, at concentrations from 12,000 to 200,000 particles kg−1 dw. Over 95% of the MP were smaller than 100 μm. High deposition of small MP agreed with known areas for organic deposition. Polyurethane acrylate resins dominated the small MP while polyamide fibers dominated the larger MP. Particles >500 μm showed different maximum concentrations and spatial distribution from the smaller particles. This study is the first to report concentration ranges of identified plastic particles from a Norwegian fjord, down to sizes below the limit of visual identification. The results provides a baseline for future comparison, and point at relevant sizes for environmental risk assessments.
Mostrar más [+] Menos [-]Different stories told by small and large microplastics in sediment - first report of microplastic concentrations in an urban recipient in Norway Texto completo
2019
Haave, Marte | Lorenz, Claudia | Primpke, Sebastian | Gerdts, Gunnar
Microplastics (MP) in sediments from discharge sites for wastewater and deposition sites in deep regions in an urban fjord in Norway were extracted by density separation in a Microplastic Sediment Separator with ZnCl2. Particles (>11 μm) were identified using FTIR. Twenty different polymer types were identified, at concentrations from 12,000 to 200,000 particles kg−1 dw. Over 95% of the MP were smaller than 100 μm. High deposition of small MP agreed with known areas for organic deposition. Polyurethane acrylate resins dominated the small MP while polyamide fibers dominated the larger MP. Particles >500 μm showed different maximum concentrations and spatial distribution from the smaller particles. This study is the first to report concentration ranges of identified plastic particles from a Norwegian fjord, down to sizes below the limit of visual identification. The results provides a baseline for future comparison, and point at relevant sizes for environmental risk assessments.
Mostrar más [+] Menos [-]Nitrification inhibitor DMPSA mitigated N2O emission and promoted NO sink in rainfed wheat Texto completo
2019
Recio Huetos, Jaime | Álvarez Álvarez, José Manuel | Rodriguez de Quijano Urquiaga, Marta | Vallejo Garcia, Antonio
Fertilized cropping systems are important sources of nitrous oxide (N2O) and nitric oxide (NO) to the atmosphere, and biotic and abiotic processes control the production and consumption of these gases in the soil. In fact, the inhibition of nitrification after application of urea or an ammonium-based fertilizer to agricultural soils has resulted in an efficient strategy to mitigate both N2O and NO in aerated agricultural soils. Therefore, the NO and N2O mitigation capacity of a novel nitrification inhibitor (NI), 2-(3,4- dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA), has been studied in a winter wheat crop. A high temporal resolution of fluxes of NO and NO2, obtained by using automatic chambers for urea (U) and urea with DMPSA, allowed a better understanding of the temporal net emissions of these gases under field conditions. Seventy-five days after fertilization, the effective reduction of nitrification by DMPSA significantly decreased the production of NO with respect to the treatment without it, giving net consumption of NO in the soil ( 61.72 g-N ha 1 ) for U þ DMPSA in comparison to net production (227.44 g-N ha 1 ) for U. The explanation of NO deposition after NI application, due to biotic and abiotic processes in the soil-plant system, supposes a challenge that needs to be studied in the future. In the case of N2O, the addition of DMPSA significantly mitigated the emissions of this gas by 71%, though the total N2O emissions in both fertilized treatments were significantly greater than those of the control (43.69 gN ha 1 ). Regarding the fertilized treatments, no significant effect of DMPSA in comparison to urea alone was observed on grain yield nor bread-making wheat quality. To sum up, we got a significant reduction of N2O and NO with the addition of DMPSA, without a loss in yield and quality parameters in wheat.
Mostrar más [+] Menos [-]Occurrence of perfluoroalkyl substances in the Bay of Marseille (NW Mediterranean Sea) and the Rhône River Texto completo
2019
Schmidt, Natascha | Fauvelle, Vincent | Castro-Jiménez, Javier | Lajaunie-Salla, Katixa | Pinazo, C. | Yohia, Christophe | Sempere, Richard | Institut méditerranéen d'océanologie (MIO) ; Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Toulon (UTLN)-Centre National de la Recherche Scientifique (CNRS) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Institut Pythéas (OSU PYTHEAS) ; Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Centre National de la Recherche Scientifique (CNRS)
International audience | Four perfluoroalkyl substances (PFAS) were analyzed in 62 duplicate surface water samples from the Rhône River and Marseille Bay (France; NW Mediterranean Sea). Perfluorooctane sulfonate (PFOS) was detected in all samples and exceeded the European Environmental Quality Standard (EQS) values in over 80% of the cases. The most contaminated samples were from the Rhône River (up to 200 ng L-1 ∑ 4 PFAS), as well as those collected near a wastewater treatment plant outlet in Marseille Bay (up to 9 ng L −1 ∑ 4 PFAS). While PFOS was the predominant PFAS in Marseille Bay, remarkably high concentrations of perfluorohexanoic acid (PFHxA) were measured in the Rhône River (8-193 ng L −1). The relative abundances of individual compounds differed thus significantly between the Rhône River and Marseille Bay, indicating different sources. A simulation made with the MARS3D model showed that PFOS inputs from the Rhône River can enter Marseille Bay at levels > EQS.
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