Macrophomina phaseolina is a soil pathogen known as charcoal rot and can cause up to 90% yield loss in sunflower under suitable conditions. The serious damage caused by chemicals used in the control of soil-borne pathogens to the environment and health has become one of the most important concerns in agriculture. Therefore, in our study, it was aimed to determine the in vitro antagonistic effects of various bacterial species against M phaseolina. A total of 38 bacterial strains were isolated from soil samples in the rhizosphere of Malva sylvestris (hibiscus), Vicia sativa (vetch), Cicer arietinum (chickpea), Papaver rhoeas (weasel), Carlina marianum (thistle), Glebionis coronaria (crown daisy) and Vicia faba collected from Urla district of İzmir. All bacterial strains exhibited antibiosis effect under in vitro conditions, but it was determined that 5 bacterial isolates among them showed a high inhibition zone and showed an average inhibition potential ranging between 55% and 74%. The most effective bacteria identified at species and genus level by Maldi biotyping (MALDI-TOF MS) were identified as Bacillus amyloliquefaciens, Stenotrophomonas sp. and Bacillus cereus (3 isolates), and these species showed that they can be important biocontrol agents in biological control against M. phaseolina.

The studies on phage applications that provide successful results in biocontrol of foodborne pathogens and offer an environmentally friendly approach have been increasing today. Phages are viruses that can infect and kill the specific target bacterial cell. Salmonella is one of the most important pathogenic microorganisms that leading causes of food-borne illnesses called salmonellosis. Meat products especially chicken meat, fresh eggs, dairy products, ready-to-eat foods, seafood products and all kinds of contaminated food can be cause of salmonellosis. In this review, the phage application studies to control of Salmonella in food systems were summarized taking into account the research studied in recent years.

The aim of this study was to isolate, purify and determine host ranges of bacteriophages infecting Escherichia coli O157:H7 from different environment such as river/stream water, sewage, raw food, animal troughs, wastewaters of food processing plants, slaughterhouse and fish farms. For screening of E. coli O157:H7 bacteriophages, 92 samples were used. It was found that in respect to anti-E. coli O157:H7 bacteriophages, food processing wastewaters, sewage and slaughterhouse wastewaters are the richest sources, and streams, troughs and fisheries wastewater are rich in the middle, and raw foods were the poorest source. A total of 37 phages were isolated and purified. The phages counts of the purified samples were changed among 30×103 - 34×108 PFU/mL. The isolated phages were generally infective against E. coli O157:H7 and E. coli strains and 81.08% of the phages (30 out of 37) formed clear plaques and were capable to lyse at least 1 out of 5 E. coli O157:H7 strains. In addition to E. coli, some phages were capable to infect some Salmonella enterica serovars. This results show that inhibitor spectra of the phages were wide.