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Transcriptional Regulation of NADP-Dependent Malate Dehydrogenase: Comparative Genetics and Identification of DNA-Binding Proteins Texto completo
2007
Hameister, Steffen | Becker, Beril | Holtgrefe, Simone | Strodtkötter, Inga | Linke, Vera | Backhausen, Jan E | Scheibe, Renate
The transcriptional regulation of NADP-malate dehydrogenase (NADP-MDH) was analyzed in Arabidopsis ecotypes and other Brassicaceae. The amount of transcript increased twofold after transfer into low temperature (12°C) or high light (750 μE) in all species. Analysis of the genomic DNA reveals that the NADP-MDH gene (At5g58330 in A. thaliana) in Brassicaceae is located between two other genes (At5g58320 and At5g58340 in Arabidopsis), both encoded on the opposite DNA strand. No promoter elements were identified in 5' direction of the NADP-MDH gene, and the expression of NADP-MDH was not affected in knock-out plants carrying a DNA insert in the 5' region. A yeast-one hybrid approach yielded only three DNA-binding proteins for the 500-bp fragment located upstream of the ATG sequence, but 34 proteins for its coding region. However, in Chlamydomonas and in some Poaceae, which do not possess any genes within the 1200 bp upstream region, typical promoter elements were identified. Alignments of genomic DNA reveal that, in contrast to Poaceae, the introns are highly conserved within Brassicaceae. We conclude that in Brassicaceae the majority of regulatory elements are located within the coding region. The NADP-MDH gene of both families evolved from a common precursor, similar to the gene in Chlamydomonas. Changes in the selection pressure allowed the insertion of At5g58340 into the promoter region of a common ancestor. When the demand for transcriptional regulation increased, At5g58340 disappeared in Poaceae, and a promoter developed in the 5' region. In contrast, Brassicaceae maintained At5g58340 and shifted all regulatory elements into the coding region of NADP-MDH.
Mostrar más [+] Menos [-]Seed germination of agricultural weeds is promoted by the butenolide 3-methyl-2H-furo[2,3-c]pyran-2-one under laboratory and field conditions Texto completo
2007
Stevens, J. C | Merritt, D. J | Flematti, G. R | Ghisalberti, E. L | Dixon, K. W
Here we report that a synthesised form of a naturally occurring chemical (a butenolide, 3-methyl-2H-furo[2,3-c]pyran-2-one) found in smoke can stimulate seedling emergence of the economically important weed species Avena fatua L. (Poaceae), Arctotheca calendula (L.) Levyns (Asteraceae), Brassica tournefortii Gouan (Brassicaceae), and Raphanus raphanistrum L. (Brassicaceae) under field conditions at rates equivalent to 2-20 g/ha a.i. The butenolide also stimulates germination of freshly collected seeds from wild populations of these species, as well as those of Sisymbrium orientale L. (Brassicaceae), Hordeum leporinum Link (Poaceae) and Echium plantagineum L. (Boraginaceae) under laboratory conditions, consistently greater than that of smoke water. Experiments using B. tournefortii seeds collected from several locations across Western Australia and in different growing seasons found that these factors significantly influence the butenolide response, implying a role of the maternal environment in seed germination/dormancy characteristics. This research highlights the potential of butenolide as an agent for broad acre weed control and land restoration.
Mostrar más [+] Menos [-]Control of corolla monosymmetry in the Brassicaceae Iberis amara Texto completo
2007
Busch, Andrea | Zachgo, Sabine
Establishment of morphological novelties has contributed to the enormous diversification of floral architecture. One such novelty, flower monosymmetry, is assumed to have evolved several times independently during angiosperm evolution. To date, analysis of monosymmetry regulation has focused on species from taxa where monosymmetry prevails, such as the Lamiales and Fabaceae. In Antirrhinum majus, formation of a monosymmetric corolla is specified by the activity of the TCP transcription factors CYCLOIDEA (CYC) and DICHOTOMA (DICH). It was shown that establishment of monosymmetry likely requires an early asymmetric floral expression of CYC homologs that needs to be maintained until late floral stages. To understand how CYC homologs might have been recruited during evolution to establish monosymmetry, we characterized the likely CYC ortholog IaTCP1 from Iberis amara (Brassicaceae). Species of the genus Iberis form a monosymmetric corolla, whereas the Brassicaceae are otherwise dominated by genera developing a polysymmetric corolla. Instead of four equally sized petals, I. amara produces two small adaxial and two large abaxial petals. The timing of IaTCP1 expression differs from that of its Arabidopsis homolog TCP1 and other CYC homologs. IaTCP1 lacks an asymmetric early expression but displays a very strong differential expression in the corolla at later floral stages, when the strongest unequal petal growth occurs. Analysis of occasionally occurring peloric Iberis flower variants and comparative functional studies of TCP homologs in Arabidopsis demonstrate the importance of an altered temporal IaTCP1 expression within the Brassicaceae to govern the formation of a monosymmetric corolla.
Mostrar más [+] Menos [-]Comparative Genetic Mapping in Boechera stricta, a Close Relative of Arabidopsis Texto completo
2007
Schranz, M Eric | Windsor, Aaron J. | Song, Bao-hua | Lawton-Rauh, Amy | Mitchell-Olds, Thomas
The angiosperm family Brassicaceae contains both the research model Arabidopsis (Arabidopsis thaliana) and the agricultural genus BRASSICA: Comparative genomics in the Brassicaceae has largely focused on direct comparisons between Arabidopsis and the species of interest. However, the reduced genome size and chromosome number (n = 5) of Arabidopsis complicates comparisons. Arabidopsis shows extensive genome and chromosome reshuffling compared to its close relatives Arabidopsis lyrata and Capsella rubella, both with n = 8. To facilitate comparative genomics across the Brassicaceae we recently outlined a system of 24 conserved chromosomal blocks based on their positions in an ancestral karyotype of n = 8, rather than by their position in Arabidopsis. In this report we use this system as a tool to understand genome structure and evolution in Boechera stricta (n = 7). B. stricta is a diploid, sexual, and highly self-fertilizing species occurring in mostly montane regions of western North America. We have created an F₂ genetic map of B. stricta based on 192 individuals scored at 196 microsatellite and candidate gene loci. Single-nucleotide polymorphism genotyping of 94 of the loci was done simultaneously using an Illumina bead array. The total map length is 725.8 cM, with an average marker spacing of 3.9 cM. There are no gaps greater than 19.3 cM. The chromosomal reduction from n = 8 to n = 7 and other genomic changes in B. stricta likely involved a pericentric inversion, a chromosomal fusion, and two reciprocal translocations that are easily visualized using the genomic blocks. Our genetic map will facilitate the analysis of ecologically relevant quantitative variation in BOECHERA:
Mostrar más [+] Menos [-]Two New Combinations in North American Descurainia (Brassicaceae) Texto completo
2007
Goodson, Barbara E. | Al-Shehbaz, Ihsan A.
The new combinations Descurainia brevisiliqua and D. nelsonii (Brassicaceae) are proposed. Detailed descriptions and distributions are given, and the characters distinguishing them from their nearest relatives in previous classifications (D. obtusa and D. pinnata, respectively) are discussed.
Mostrar más [+] Menos [-]A Comparison of Semiochemically Mediated Interactions Involving Specialist and Generalist Brassica-feeding Aphids and the Braconid Parasitoid Diaeretiella rapae Texto completo
2007
Blande, J. D | Pickett, J. A | Poppy, G. M
Diaeretiella rapae, a parasitoid that predominately specializes in the parasitism of Brassica-feeding aphids, attacks Lipaphis erysimi, a specialist feeding aphid of the Brassicaceae and other families in the Capparales, at a greater rate than the generalist-feeding aphid, Myzus persicae. In this study, we investigated the orientation behavior of D. rapae to the volatile chemicals produced when these two aphid species feed on turnip (Brassica rapa var rapifera). We showed no significant preference orientation behavior to either aphid/turnip complex over the other. Isothiocyanates are among the compounds emitted by plants of the Brassicaceae in response to insect feeding damage, including by aphids. We assessed parasitoid orientation behavior in response to laboratory-formulated isothiocyanates. We tested two formulations and discovered significant orientation toward 3-butenyl isothiocyanate. We also assessed plant and aphid glucosinolate content, and showed large levels of glucosinolate concentration in L. erysimi, whereas there was little change in plant content in response to aphid feeding. Our results suggest that during the process of host location, similar cues may be utilized for locating L. erysimi and M. persicae, whereas the acceptance of hosts and their suitability may involve aspects of nonvolatile aphid chemistry.
Mostrar más [+] Menos [-]Predatory Behavior of Polistes dominulus Wasps in Response to Cardenolides and Glucosinolates in Pieris napi Caterpillars Texto completo
2007
Rayor, Linda S. | Mooney, Larissa J. | Renwick, J Alan
To examine how plant allelochemicals in prey affect foraging choices made by generalist predator paper wasps, Polistes dominulus (Vespidae), we compared predation on Pieris napi (Pieridae) caterpillars reared on host plants with different allelochemicals. In naturalistic behavioral choice experiments, free-flying wasps chose between living pierids reared on cabbage (Brassica oleracea), which lacks deterrent allelochemicals, or alternate host plants with potentially deterrent allelochemicals. The alternative host plants were: wormwood mustard, (Erysimum cheiranthoides: Brassicaceae), which contains cardenolides; nasturtium (Tropaeolum majus: Tropaeolaceae) with high concentrations of chlorogenic acid; and black mustard (Brassica nigra: Brassicaceae) with high concentrations of the aliphatic glucosinolate, sinigrin. Although wasps captured equal numbers of caterpillars reared on cabbage and each alternate host plant, they spent significantly longer handling prey from the alternate host plants as they selectively removed the caterpillar’s gut, which contained the plant material. This was true even if the caterpillar did not sequester toxins in its tissues, as revealed by high performance liquid chromatography (HPLC) analysis of Erysimum-reared pierids. Because handling time is longer, predators that capture pierids containing non-sequestered allelochemicals experience an overall reduction in foraging rate that may translate into a fitness cost.
Mostrar más [+] Menos [-]Identification and Host Relations of Turnip ringspot virus, A Novel Comovirus from Ohio Texto completo
2007
Rajakaruna, P. | Khandekar, S. | Meulia, T. | Leisner, S.M.
Viruslike chlorotic ring spot symptoms and line patterns of unknown origin were observed on a greenhouse-grown turnip plant. The suspected virus was mechanically transmissible to plants in the Brassicaceae. Electron microscopic analysis revealed icosahedral particles approximately 28 nm in diameter. Reverse transcriptase-polymerase chain reaction (RT-PCR) analyses suggested that the pathogen is a comovirus, an observation that was confirmed by analysis of portions of the genomic sequence. This virus was provisionally named Turnip ringspot virus (TuRSV). Based on the RNA 1 sequence, TuRSV is most similar to Radish mosaic virus, another pathogen that infects members of the Brassicaceae. Arabidopsis thaliana is susceptible to TuRSV, and 12 out of the 23 ecotypes studied showed symptoms when inoculated with the virus. TuRSV induced a variety of responses on ecotypes from death to no infection. Some ecotypes showed one or two rounds of symptom display followed by recovery when inoculated with TuRSV. About half of the ecotypes (11/23) analyzed showed no symptoms when inoculated with TuRSV. Col-0 plants showed no symptoms, and infectious virus was not recovered from systemic leaves, although it could be detected by RT-PCR. Col-0 plants harboring mutations impairing the ethylene, jasmonic acid, or salicylic acid signaling pathways did not show symptoms when inoculated with TuRSV.
Mostrar más [+] Menos [-]Effect of Nutrient Solution Concentration on the Growth and Mineral Uptake of Various Wrap-up Vegetables and Herbs Grown with Mixed Planting in DFT Hydroponics
2007
Seo, T.C. (Protected Horticulture Experiment Station, NHRI, RDA, Busan, Republic of Korea) | Rho, M.Y. (Protected Horticulture Experiment Station, NHRI, RDA, Busan, Republic of Korea) | Gang, N.J. (Protected Horticulture Experiment Station, NHRI, RDA, Busan, Republic of Korea) | Lee, S.C. (Protected Horticulture Experiment Station, NHRI, RDA, Busan, Republic of Korea) | Choi, Y.H. (Protected Horticulture Experiment Station, NHRI, RDA, Busan, Republic of Korea) | Yun, H.K. (Rural Development Administration, Suwon, Republic of Korea)
The twenty seven wrap-up vegetables (13 Compositae, 14 Brassicaceae) and seven herbs (6 Labiatae, 1 Umbelliferae) were cultivated with a deep flow technique (DFT) hydroponic beds and treated with 3 levels of nutrient solution concentrations of 1.2, 2.4, and 3.6 dSㆍm-¹ in summer and autumn season. The pH and electrical conductivity (EC) change of nutrient solution, fresh weight, and mineral contents of plants were investigated. The pH was maintained lower in high electrical conductivity (EC) treatment and in summer than autumn.
Mostrar más [+] Menos [-]Weeds of wheat fields of village Qambar, district Swat, Pakistan
2007
Akhtar, N. (Peshawar Univ. (Pakistan). Dept. of Botany) | Hussain, F. (Peshawar Univ. (Pakistan). Dept. of Botany)
Twenty three species of 13 families were identified as weeds of wheat fields from five different localities of village Qambar, District Swat, during April, 2007. Density, frequency, cover and importance values for each species were calculated. The families in decreasing order of number of species were Brassicaceae (5 Spp.), Fabaceae (4 Spp), Caryophyllaceae (3 Spp) and Poaceae (2 Spp). The remaining 9 families were represented by one species each. Stellaria media and Poa annua appeared to be problematic weeds in the area.
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