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Physics-informed machine learning algorithms for forecasting sediment yield: an analysis of physical consistency, sensitivity, and interpretability Texte intégral
2024
El Bilali, A. | Brouziyne, Youssef | Attar, O. | Lamane, H. | Hadri, A. | Taleb, A.
The sediment transport, involving the movement of the bedload and suspended sediment in the basins, is a critical environmental concern that worsens water scarcity and leads to degradation of land and its ecosystems. Machine learning (ML) algorithms have emerged as powerful tools for predicting sediment yield. However, their use by decision-makers can be attributed to concerns regarding their consistency with the involved physical processes. In light of this issue, this study aims to develop a physics-informed ML approach for predicting sediment yield. To achieve this objective, Gaussian, Center, Regular, and Direct Copulas were employed to generate virtual combinations of physical of the sub-basins and hydrological datasets. These datasets were then utilized to train deep neural network (DNN), conventional neural network (CNN), Extra Tree, and XGBoost (XGB) models. The performance of these models was compared with the modified universal soil loss equation (MUSLE), which serves as a process-based model. The results demonstrated that the ML models outperformed the MUSLE model, exhibiting improvements in Nash–Sutcliffe efficiency (NSE) of approximately 10%, 18%, 32%, and 41% for the DNN, CNN, Extra Tree, and XGB models, respectively. Furthermore, through Sobol sensitivity and Shapley additive explanation–based interpretability analyses, it was revealed that the Extra Tree model displayed greater consistency with the physical processes underlying sediment transport as modeled by MUSLE. The proposed framework provides new insights into enhancing the accuracy and applicability of ML models in forecasting sediment yield while maintaining consistency with natural processes. Consequently, it can prove valuable in simulating process-related strategies aimed at mitigating sediment transport at watershed scales, such as the implementation of best management practices.
Afficher plus [+] Moins [-]New flux based dose-response relationships for ozone for European forest tree species Texte intégral
2015
Büker, P. | Feng, Z. | Uddling, J. | Briolat, A. | Alonso, R. | Braun, S. | Elvira, S. | Gerosa, G | Karlsson, P.E. | Le Thiec, Didier | Marzuoli, R. | Mills, G. | Oksanen, E. | Wieser, G. | Wilkinson, M. | Emberson, L.D. | Environment Department ; Stockholm Environment Institute in York (SEI) | Research Centre for Eco-Environmental Science ; Chinese Academy of Sciences [Changchun Branch] (CAS) | Department of Biological and Environmental Sciences [Gothenburg] ; Göteborgs Universitet = University of Gothenburg (GU) | Ecotoxicology of Air Pollution (CIEMAT) | Institut für Angewandte Pflanzenbiologie (IAP) | Dipartimento di Matematica e Fisica ; Università cattolica del Sacro Cuore [Milano] (Unicatt) | Swedish Environmental Research Institute (IVL) | Ecologie et Ecophysiologie Forestières [devient SILVA en 2018] (EEF) ; Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL) | Centre for Ecology and Hydrology ; Bangor University | Department of Biology ; University of Eastern Finland | Department for Natural Hazards and Alpine Timberline ; Federal Research and Training Centre for Forests Natural Hazards and Landscape | Alice Holt Lodge ; Forest Research [Great Britain] | UK Department for Environment, Food and Rural Affairs (Defra - AQ0601) | European Project: 282910
New flux based dose-response relationships for ozone for European forest tree species Texte intégral
2015
Büker, P. | Feng, Z. | Uddling, J. | Briolat, A. | Alonso, R. | Braun, S. | Elvira, S. | Gerosa, G | Karlsson, P.E. | Le Thiec, Didier | Marzuoli, R. | Mills, G. | Oksanen, E. | Wieser, G. | Wilkinson, M. | Emberson, L.D. | Environment Department ; Stockholm Environment Institute in York (SEI) | Research Centre for Eco-Environmental Science ; Chinese Academy of Sciences [Changchun Branch] (CAS) | Department of Biological and Environmental Sciences [Gothenburg] ; Göteborgs Universitet = University of Gothenburg (GU) | Ecotoxicology of Air Pollution (CIEMAT) | Institut für Angewandte Pflanzenbiologie (IAP) | Dipartimento di Matematica e Fisica ; Università cattolica del Sacro Cuore [Milano] (Unicatt) | Swedish Environmental Research Institute (IVL) | Ecologie et Ecophysiologie Forestières [devient SILVA en 2018] (EEF) ; Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL) | Centre for Ecology and Hydrology ; Bangor University | Department of Biology ; University of Eastern Finland | Department for Natural Hazards and Alpine Timberline ; Federal Research and Training Centre for Forests Natural Hazards and Landscape | Alice Holt Lodge ; Forest Research [Great Britain] | UK Department for Environment, Food and Rural Affairs (Defra - AQ0601) | European Project: 282910
Supplementary data related to this article can be found at :http://dx.doi.org/10.1016/j.envpol.2015.06.033 | To derive O3 dose-response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O3 doses (PODy) were related to biomass reductions.[br/]PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation.[br/]Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods.[br/]This study validates the stomatal O3 flux concept and represents a step forward in predicting O3 damage to forests in a spatially and temporally varying climate.
Afficher plus [+] Moins [-]New flux based dose–response relationships for ozone for European forest tree species Texte intégral
2015
Büker, P. | Feng, Z. | Uddling, J. | Briolat, A. | Alonso, R. | Brown, Steve | Elvira, S. | Gerosa, G. | Karlsson, P.E. | Le Thiec, D. | Marzuoli, R. | Mills, G. | Oksanen, E. | Wieser, G. | Wilkinson, M. | Emberson, L.D.
To derive O3 dose–response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O3 doses (PODy) were related to biomass reductions. PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation. Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods. This study validates the stomatal O3 flux concept and represents a step forward in predicting O3 damage to forests in a spatially and temporally varying climate.
Afficher plus [+] Moins [-]Earthworm bioturbation influences the phytoavailability of metals released by particles in cultivated soils Texte intégral
2014
Lévèque, Thibaut | Capowiez, Yvan | Schreck, Eva | Xiong, Tiantian | Foucault, Yann | Dumat, Camille | Laboratoire Ecologie Fonctionnelle et Environnement (LEFE) ; Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3) ; Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT) | Agence de l'Environnement et de la Maîtrise de l'Énergie (ADEME) | Unité de recherche Plantes et Systèmes de Culture Horticoles (PSH) ; Institut National de la Recherche Agronomique (INRA) | Centre National de la Recherche Scientifique (CNRS) | Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT) | Société de Traitement Chimique des Métaux - STCM (FRANCE) | École nationale supérieure agronomique de Toulouse (ENSAT) ; Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT)-Université de Toulouse (UT) | INSU-EC2CO program; French Agency of the Environment and Energy (ADEME); Chemical Metal Treatments Company (STCM); National Research Agency [ANR-12-0011-VBDU]; ADEME, France
Earthworm bioturbation influences the phytoavailability of metals released by particles in cultivated soils Texte intégral
2014
Lévèque, Thibaut | Capowiez, Yvan | Schreck, Eva | Xiong, Tiantian | Foucault, Yann | Dumat, Camille | Laboratoire Ecologie Fonctionnelle et Environnement (LEFE) ; Institut Ecologie et Environnement - CNRS Ecologie et Environnement (INEE-CNRS) ; Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3) ; Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT) | Agence de l'Environnement et de la Maîtrise de l'Énergie (ADEME) | Unité de recherche Plantes et Systèmes de Culture Horticoles (PSH) ; Institut National de la Recherche Agronomique (INRA) | Centre National de la Recherche Scientifique (CNRS) | Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT) | Société de Traitement Chimique des Métaux - STCM (FRANCE) | École nationale supérieure agronomique de Toulouse (ENSAT) ; Institut National Polytechnique (Toulouse) (Toulouse INP) ; Université de Toulouse (UT)-Université de Toulouse (UT) | INSU-EC2CO program; French Agency of the Environment and Energy (ADEME); Chemical Metal Treatments Company (STCM); National Research Agency [ANR-12-0011-VBDU]; ADEME, France
International audience | The influence of earthworm activity on soil-to-plant metal transfer was studied by carrying out six weeks mesocosms experiments with or without lettuce and/or earthworms in soil with a gradient of metal concentrations due to particles fallouts. Soil characteristics, metal concentrations in lettuce and earthworms were measured and soil porosity in the mesocosms was determined. Earthworms increased the soil pH, macroporosity and soil organic matter content due to the burying of wheat straw provided as food. Earthworm activities increased the metals concentrations in lettuce leaves. Pb and Cd concentrations in lettuce leaves can increase up to 46% with earthworm activities ... These results and the low correlation between estimated by CaCl2 and EDTA and measured pollutant phytoavailability suggest that earthworm bioturbation was the main cause of the increase. Bioturbation could affect the proximity of pollutants to the roots and soil organic matter.
Afficher plus [+] Moins [-]Earthworm bioturbation influences the phytoavailability of metals released by particles in cultivated soils Texte intégral
2014
Leveque, Thibaut | Capowiez, Yvan | Schreck, Eva | Xiong, Tiantian | Foucault, Yann | Dumat, Camille
The influence of earthworm activity on soil-to-plant metal transfer was studied by carrying out six weeks mesocosms experiments with or without lettuce and/or earthworms in soil with a gradient of metal concentrations due to particles fallouts. Soil characteristics, metal concentrations in lettuce and earthworms were measured and soil porosity in the mesocosms was determined. Earthworms increased the soil pH, macroporosity and soil organic matter content due to the burying of wheat straw provided as food. Earthworm activities increased the metals concentrations in lettuce leaves. Pb and Cd concentrations in lettuce leaves can increase up to 46% with earthworm activities … These results and the low correlation between estimated by CaCl2 and EDTA and measured pollutant phytoavailability suggest that earthworm bioturbation was the main cause of the increase. Bioturbation could affect the proximity of pollutants to the roots and soil organic matter.
Afficher plus [+] Moins [-]Main conclusions and perspectives from the collective scientific assessment of the effects of plant protection products on biodiversity and ecosystem services along the land-sea continuum in France and French overseas territories Texte intégral
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Amichot, Marcel | Artigas, Joan | Aviron, Stéphanie | Barthélémy, Carole | Beaudouin, Rémy | Bedos, Carole | Berard, Annette | Berny, Philippe | Bertrand, Cédric | Bertrand, Colette | Betoulle, Stéphane | Bureau-Point, Eve | Charles, Sandrine | Chaumot, Arnaud | Chauvel, Bruno | Coeurdassier, Michaël | Corio-Costet, Marie-France | Coutellec, Marie-Agnès | Crouzet, Olivier | Doussan, Isabelle | Fabure, Juliette | Fritsch, Clémentine | Gallai, Nicola | Gonzalez, Patrice | Gouy, Véronique | Hedde, Mickaël | Langlais, Alexandra | Le Bellec, Fabrice | Leboulanger, Christophe | Margoum, Christelle | Martin-Laurent, Fabrice | Mongruel, Rémi | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nelieu, Sylvie | Pelosi, Céline | Rault, Magali | Sabater, Sergi | Stachowski-Haberkorn, Sabine | Sucre, Eliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie
Main conclusions and perspectives from the collective scientific assessment of the effects of plant protection products on biodiversity and ecosystem services along the land-sea continuum in France and French overseas territories Texte intégral
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Amichot, Marcel | Artigas, Joan | Aviron, Stéphanie | Barthélémy, Carole | Beaudouin, Rémy | Bedos, Carole | Berard, Annette | Berny, Philippe | Bertrand, Cédric | Bertrand, Colette | Betoulle, Stéphane | Bureau-Point, Eve | Charles, Sandrine | Chaumot, Arnaud | Chauvel, Bruno | Coeurdassier, Michaël | Corio-Costet, Marie-France | Coutellec, Marie-Agnès | Crouzet, Olivier | Doussan, Isabelle | Fabure, Juliette | Fritsch, Clémentine | Gallai, Nicola | Gonzalez, Patrice | Gouy, Véronique | Hedde, Mickaël | Langlais, Alexandra | Le Bellec, Fabrice | Leboulanger, Christophe | Margoum, Christelle | Martin-Laurent, Fabrice | Mongruel, Rémi | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nelieu, Sylvie | Pelosi, Céline | Rault, Magali | Sabater, Sergi | Stachowski-Haberkorn, Sabine | Sucre, Eliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie
Preservation of biodiversity and ecosystem services is critical for sustainable development and human well-being. However, an unprecedented erosion of biodiversity is observed and the use of plant protection products (PPP) has been identified as one of its main causes. In this context, at the request of the French Ministries responsible for the Environment, for Agriculture and for Research, a panel of 46 scientific experts ran a nearly 2-year-long (2020–2022) collective scientific assessment (CSA) of international scientific knowledge relating to the impacts of PPP on biodiversity and ecosystem services. The scope of this CSA covered the terrestrial, atmospheric, freshwater, and marine environments (with the exception of groundwater) in their continuity from the site of PPP application to the ocean, in France and French overseas territories, based on international knowledge produced on or transposable to this type of context (climate, PPP used, biodiversity present, etc.). Here, we provide a brief summary of the CSA's main conclusions, which were drawn from about 4500 international publications. Our analysis finds that PPP contaminate all environmental matrices, including biota, and cause direct and indirect ecotoxicological effects that unequivocally contribute to the decline of certain biological groups and alter certain ecosystem functions and services. Levers for action to limit PPP-driven pollution and effects on environmental compartments include local measures from plot to landscape scales and regulatory improvements. However, there are still significant gaps in knowledge regarding environmental contamination by PPPs and its effect on biodiversity and ecosystem functions and services. Perspectives and research needs are proposed to address these gaps.
Afficher plus [+] Moins [-]Main conclusions and perspectives from the collective scientific assessment of the effects of plant protection products on biodiversity and ecosystem services along the land–sea continuum in France and French overseas territories Texte intégral
2025
Pesce, Stephane | Mamy, Laure | Sanchez, Wilfried | Amichot, Marcel | Artigas, Joan | Mongruel, Remi | Munaron, Dominique | Aviron, Stephanie | Barthélémy, Carole | Beaudouin, Rémy | Bedos, Carole | Bérard, Annette | Berny, Philippe | Bertrand, Cédric | Bertrand, Colette | Betoulle, Dtephane | Bureau‑point, Eve | Charles, Sandrine | Chaumot, Arnaud | Chauvel, Bruno | Coeurdassier, Michael | Corio‑costet, Marie-france | Coutellec, Agnes | Crouzet, Olivier | Doussan, Isabelle | Faburé, Juliette | Fritsch, Clémentine | Gallai, Nicola | Gonzalez, Patrice | Gouy, Véronique | Hedde, Mickael | Langlais, Alexandra | Le Bellec, Fabrice | Leboulanger, Christophe | Margoum, Christelle | Martin‑laurent, Fabrice | Morin, Soizic | Mougin, Christian | Nélieu, Sylvie | Pelosi, Celine | Rault, Magali | Sabater, Sergi | Stachowski-haberkorn, Sabine | Sucré, Alliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie
Preservation of biodiversity and ecosystem services is critical for sustainable development and human well-being. However, an unprecedented erosion of biodiversity is observed and the use of plant protection products (PPP) has been identified as one of its main causes. In this context, at the request of the French Ministries responsible for the Environment, for Agriculture and for Research, a panel of 46 scientific experts ran a nearly 2-year-long (2020–2022) collective scientific assessment (CSA) of international scientific knowledge relating to the impacts of PPP on biodiversity and ecosystem services. The scope of this CSA covered the terrestrial, atmospheric, freshwater, and marine environments (with the exception of groundwater) in their continuity from the site of PPP application to the ocean, in France and French overseas territories, based on international knowledge produced on or transposable to this type of context (climate, PPP used, biodiversity present, etc.). Here, we provide a brief summary of the CSA’s main conclusions, which were drawn from about 4500 international publications. Our analysis finds that PPP contaminate all environmental matrices, including biota, and cause direct and indirect ecotoxicological effects that unequivocally contribute to the decline of certain biological groups and alter certain ecosystem functions and services. Levers for action to limit PPP-driven pollution and effects on environmental compartments include local measures from plot to landscape scales and regulatory improvements. However, there are still significant gaps in knowledge regarding environmental contamination by PPPs and its effect on biodiversity and ecosystem functions and services. Perspectives and research needs are proposed to address these gaps.
Afficher plus [+] Moins [-]Main conclusions and perspectives from the collective scientific assessment of the effects of plant protection products on biodiversity and ecosystem services along the land–sea continuum in France and French overseas territories Texte intégral
2025
Pesce, Stéphane | Mamy, Laure | Sanchez, Wilfried | Amichot, Marcel | Artigas, Joan | Aviron, Stéphanie | Barthélémy, Carole | Beaudouin, Rémy | Bedos, Carole | Bérard, Annette | Berny, Philippe | Bertrand, Cédric | Bertrand, Colette | Betoulle, Stéphane | Bureau-Point, Ève | Charles, Sandrine | Chaumot, Arnaud | Chauvel, Bruno | Coeurdassier, Michael | Corio-Costet, Marie-France | Coutellec, Marie-Agnès | Crouzet, Olivier | Doussan, Isabelle | Fabure, Juliette | Fritsch, Clémentine | Gallai, Nicola | Gonzalez, Patrice | Gouy-Boussada, Véronique | Hedde, Mickael | Langlais, Alexandra | Le Bellec, Fabrice | Leboulanger, Christophe | Margoum, Christelle | Martin-Laurent, Fabrice | Mongruel, Rémi | Morin, Soizic | Mougin, Christian | Munaron, Dominique | Nélieu, Sylvie | Pélosi, Céline | Rault, Magali | Sabater, Sergi | Stachowski-Haberkorn, Sabine | Sucré, Elliott | Thomas, Marielle | Tournebize, Julien | Leenhardt, Sophie | RiverLy - Fonctionnement des hydrosystèmes (RiverLy) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Ecologie fonctionnelle et écotoxicologie des agroécosystèmes (ECOSYS) ; AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) | Institut Sophia Agrobiotech (ISA) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Côte d'Azur (UniCA) | Laboratoire Microorganismes : Génome et Environnement (LMGE) ; Centre National de la Recherche Scientifique (CNRS)-Université Clermont Auvergne (UCA) | Biodiversité agroécologie et aménagement du paysage (UMR BAGAP) ; Ecole Supérieure des Agricultures (ESA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Laboratoire Population-Environnement-Développement (LPED) ; Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU) | Institut National de l'Environnement Industriel et des Risques (INERIS) | Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH) ; Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS) | Interactions Cellules Environnement - UR (ICE) ; VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS) | Centre de recherches insulaires et observatoire de l'environnement (CRIOBE) ; Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) | Stress Environnementaux et BIOsurveillance des milieux aquatiques (SEBIO) ; Institut National de l'Environnement Industriel et des Risques (INERIS)-Université de Reims Champagne-Ardenne (URCA)-Université Le Havre Normandie (ULH) ; Normandie Université (NU)-Normandie Université (NU)-SFR Condorcet ; Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS)-Université de Reims Champagne-Ardenne (URCA)-Centre National de la Recherche Scientifique (CNRS) | Centre Norbert Elias (CNELIAS) ; Avignon Université (AU)-Aix Marseille Université (AMU)-Maison méditerranéenne des sciences de l'Homme (MMSH) ; Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) | Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Modélisation et écotoxicologie prédictives [LBBE] ; Département biostatistiques et modélisation pour la santé et l'environnement [LBBE] ; Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE) ; Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL) ; Université de Lyon-Université de Lyon-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS) | Agroécologie [Dijon] ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Dijon ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université Bourgogne Europe (UBE) | Laboratoire Chrono-environnement (UMR 6249) (LCE) ; Centre National de la Recherche Scientifique (CNRS)-Université de Franche-Comté (UFC) ; Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC) | Santé et agroécologie du vignoble (UMR SAVE) ; Université de Bordeaux (UB)-Institut des Sciences de la Vigne et du Vin (ISVV)-Ecole Nationale Supérieure des Sciences Agronomiques de Bordeaux-Aquitaine (Bordeaux Sciences Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Dynamique et durabilité des écosystèmes : de la source à l’océan (DECOD) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut Agro Rennes Angers ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Service santé de la faune et fonctionnement des écosystèmes agricoles (OFB Service Santé Agri) ; OFB Direction de la recherche et de l’appui scientifique (OFB - DRAS) ; Office français de la biodiversité (OFB)-Office français de la biodiversité (OFB) | Groupe de Recherche en Droit, Economie et Gestion (GREDEG) ; Université Nice Sophia Antipolis (1965 - 2019) (UNS)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UniCA) | École Nationale Supérieure de Formation de l'Enseignement Agricole de Toulouse-Auzeville (ENSFEA) | Laboratoire d'Etude et de Recherche sur l'Economie, les Politiques et les Systèmes Sociaux (LEREPS) ; Université Toulouse Capitole (UT Capitole) ; Université de Toulouse (UT)-Université de Toulouse (UT)-Université Toulouse - Jean Jaurès (UT2J) ; Université de Toulouse (UT)-Université de Toulouse (UT)-Institut d'Études Politiques [IEP] - Toulouse-École Nationale Supérieure de Formation de l'Enseignement Agricole de Toulouse-Auzeville (ENSFEA) | Environnements et Paléoenvironnements OCéaniques (EPOC) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Bordeaux (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS) | Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro) | Institut de l'Ouest : Droit et Europe (IODE) ; Université de Rennes (UR)-Centre National de la Recherche Scientifique (CNRS) | Fonctionnement agroécologique et performances des systèmes de cultures horticoles (UPR HORTSYS) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad) | Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST) ; Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad) | MARine Biodiversity Exploitation and Conservation - MARBEC (UMR MARBEC) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM) | Aménagement des Usages des Ressources et des Espaces marins et littoraux - Centre de droit et d'économie de la mer (AMURE) ; Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS) | Ecosystèmes aquatiques et changements globaux (UR EABX) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Institut méditerranéen de biodiversité et d'écologie marine et continentale (IMBE) ; Avignon Université (AU)-Aix Marseille Université (AMU)-Institut de recherche pour le développement [IRD] : UMR237-Centre National de la Recherche Scientifique (CNRS) | Universitat de Girona = University of Girona (UdG) | Unité Physiologie et Toxines des Microalgues Toxiques et Nuisibles (PHYTOX) ; Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) | Centre Universitaire de Formation et de Recherche de Mayotte (CUFR) (CUFR) | Unité de Recherches Animal et Fonctionnalités des Produits Animaux (URAFPA) ; Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Hydrosystèmes continentaux anthropisés : ressources, risques, restauration (UR HYCAR) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | Direction de l'Expertise scientifique collective, de la Prospective et des Etudes (DEPE) ; Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) | French Office for Biodiversity (OFB) through the national ECOPHYTO plan | ANR-11-LABX-0066,SMS/SSW,Structurations des mondes sociaux(2011)
International audience | Preservation of biodiversity and ecosystem services is critical for sustainable development and human well-being. However, an unprecedented erosion of biodiversity is observed and the use of plant protection products (PPP) has been identified as one of its main causes. In this context, at the request of the French Ministries responsible for the Environment, for Agriculture and for Research, a panel of 46 scientific experts ran a nearly 2-year-long (2020-2022) collective scientific assessment (CSA) of international scientific knowledge relating to the impacts of PPP on biodiversity and ecosystem services. The scope of this CSA covered the terrestrial, atmospheric, freshwater, and marine environments (with the exception of groundwater) in their continuity from the site of PPP application to the ocean, in France and French overseas territories, based on international knowledge produced on or transposable to this type of context (climate, PPP used, biodiversity present, etc.). Here, we provide a brief summary of the CSA's main conclusions, which were drawn from about 4500 international publications. Our analysis finds that PPP contaminate all environmental matrices, including biota, and cause direct and indirect ecotoxicological effects that unequivocally contribute to the decline of certain biological groups and alter certain ecosystem functions and services. Levers for action to limit PPP-driven pollution and effects on environmental compartments include local measures from plot to landscape scales and regulatory improvements. However, there are still significant gaps in knowledge regarding environmental contamination by PPPs and its effect on biodiversity and ecosystem functions and services. Perspectives and research needs are proposed to address these gaps.
Afficher plus [+] Moins [-]UV-degradation is a key driver of the fate and impacts of marine plastics. How can laboratory experiments be designed to effectively inform risk assessment? | UV-degradation is a key driver of the fate and impacts of marine plastics. How can laboratory experiments be designed to effectively inform risk assessment? Texte intégral
2025
Hernandez, Laura M. | Howarth-Forster, Lucy | Sørensen, Lisbet | Booth, Andrew Michael | Vidal, Alice | Tufenkji, Nathalie | Sempéré, Richard | Schmidt, Natascha
Marine plastic litter is subject to different abiotic and biotic forces that lead to its degradation, the main driver being UV-induced photodegradation. Since UV-exposure leads to both physical and chemical degradation of plastic, leading to a release of micro- and nanoplastics as well as leaching of chemicals and degradation products – it is expected to have radical impacts on plastics fate and effects in the marine environment. The number of laboratory studies investigating the mechanisms of plastic UV-degradation in seawater has increased significantly in the past 10 years, but are the exposures designed in a manner that allow observations to be extrapolated to environmental fate? Most studies to date focus on quantifying plastic fragmentation and surface changes, but is this relevant for impact assessments? Here, we provide a review of the current scientific literature on UV-degradation of plastic under marine conditions. Plastic fragmentation processes and surface changes as well as implications of UV-degradation of plastics on additive leaching and the toxicity of UV-weathered versus non-weathered plastics are highlighted. Furthermore, experimental set-ups are critically inspected and recommendations for future studies are issued. | publishedVersion
Afficher plus [+] Moins [-]The long-lived deep-sea bivalve Acesta excavata is sensitive to the dual stressors of sediment and warming | The long-lived deep-sea bivalve Acesta excavata is sensitive to the dual stressors of sediment and warming Texte intégral
2024
Scanes, Elliot | Kutti, Tina | Fang, James K.H. | Johnston, Emma L. | Ross, Pauline M. | Bannister, Raymond
Human influence in the deep-sea is increasing as mining and drilling operations expand, and waters warm because of climate change. Here, we investigate how the long-lived deep-sea bivalve, Acesta excavata responds to sediment pollution and/or acute elevated temperatures. A. excavata were exposed to suspended sediment, acute warming, and a combination of the two treatments for 40 days. We measured O2 consumption, NH4+ release, Total Organic Carbon (TOC), and lysosomal membrane stability (LMS). We found suspended sediment and warming interacted to decrease O:N ratios, while sediment as a single stressor increased the release of TOC and warming increased NH4+ release in A. excavata. Warming also increased levels of LMS. We found A. excavata used protein catabolism to meet elevated energetic demands indicating a low tolerance to stress. A. excavata has limited capacity for physiological responses to the stressors of warming and sediment which may lead to decreased fitness of A. excavata. | publishedVersion
Afficher plus [+] Moins [-]The underwater soundscape of the North Sea | The underwater soundscape of the North Sea Texte intégral
2024
Basan, F. | Fischer, J.-G. | Putland, R. | Brinkkemper, J. | de Jong, Jong | Binnerts, B. | Norro, A. | Kühnel, D. | Ødegaard, Lars Alf | Andersson, M. | Lalander, E. | Tougaard, J. | Griffiths, E.T. | Kosecka, M. | Edwards, E. | Merchant, N.D. | de Jong, Karen | Robinson, S. | Wang, L. | Kinneging, N.
As awareness on the impact of anthropogenic underwater noise on marine life grows, underwater noise measurement programs are needed to determine the current status of marine areas and monitor long-term trends. The Joint Monitoring Programme for Ambient Noise in the North Sea (JOMOPANS) collaborative project was funded by the EU Interreg to collect a unique dataset of underwater noise levels at 19 sites across the North Sea, spanning many different countries and covering the period from 2019 to 2020. The ambient noise from this dataset has been characterised and compared - setting a benchmark for future measurements in the North Sea area. By identifying clusters with similar sound characteristics in three broadband frequency bands (25–160 Hz, 0.2–1.6 kHz, and 2–10 kHz), geographical areas that are similarly affected by sound have been identified. The measured underwater sound levels show a persistent and spatially uniform correlation with wind speed at high frequencies (above 1 kHz) and a correlation with the distance from ships at mid and high frequencies (between 40 Hz and 4 kHz). Correlation with ocean current velocity at low frequencies (up to 200 Hz), which are susceptible to nonacoustic contamination by flow noise, was also evaluated. These correlations were evaluated and simplified linear scaling laws for wind and current speeds were derived. The presented dataset provides a baseline for underwater noise measurements in the North Sea and shows that spatial variability of the dominant sound sources must be considered to predict the impact of noise reduction measures. | publishedVersion
Afficher plus [+] Moins [-]Environmental fluoxetine promotes skin cell proliferation and wound healing Texte intégral
2024
Rodríguez Barucg, Quentin | García, Ángel A. | García Merino, Belén | Akinmola, Tomilayo | Okotie-Eboh, Temisanren | Francis, Thomas | Bringas Elizalde, Eugenio | Ortiz Uribe, Inmaculada | Wade, Mark A. | Dowle, Adam | Joyce, Domino A. | Hardman, Matthew J. | Wilkinson, Holly N. | Beltrán Álvarez, Pedro | Universidad de Cantabria
This study investigates the effects of environmentally-relevant concentrations of fluoxetine (FLX, commercial name: Prozac) on wound healing. Pollution of water systems with pharmaceutical and personal care products, including antidepressants such as FLX and other selective serotonin reuptake inhibitors, is a growing environmental concern. Environmentally-relevant FLX concentrations are known to impact physiological functions and behaviour of aquatic animals, however, the effects of exposure on humans are currently unknown. Using a combination of human skin biopsies and a human keratinocyte cell line, we show that exposure to environmental FLX promotes wound closure. We show dose-dependent increases in wound closure with FLX concentrations from 125 ng/l. Using several –omics and pharmaceutical approaches, we demonstrate that the mechanisms underlying enhanced wound closure are increased cell proliferation and serotonin signalling. Transcriptomic analysis revealed 350 differentially expressed genes after exposure. Downregulated genes were enriched in pathways related to mitochondrial function and metabolism, while upregulated genes were associated with cell proliferation and tissue morphogenesis. Kinase profiling showed altered phosphorylation of kinases linked to the MAPK pathway. Consistent with this, phosphoproteomic analyses identified 235 differentially phosphorylated proteins after exposure, with enriched GO terms related to cell cycle, division, and protein biosynthesis. Treatment of skin biopsies and keratinocytes with ketanserin, a serotonin receptor antagonist, reversed the increase in wound closure observed upon exposure. These findings collectively show that exposure to environmental FLX promotes wound healing through modulating serotonin signalling, gene expression and protein phosphorylation, leading to enhanced cell proliferation. Our results justify a transition from the study of behavioural effects of environmental FLX in aquatic animals to the investigation of effects of exposure on wound healing in aquatic and terrestrial animals, including direct impacts on human health. | QRB acknowledges a ‘Happy Chemical’ PhD studentship funded by the University of Hull. BGM would also like to express her gratitude to the Spanish Ministry of Science, Innovation and Universities for the FPI predoctoral contract PRE2019–089339 and to the University of Cantabria for the predoctoral mobility grant Erasmus+ nº 2021-1-ES01-KA131-HED-000005117. The York Centre of Excellence in Mass Spectrometry was created thanks to a major capital investment through Science City York, supported by Yorkshire Forward with funds from the Northern Way Initiative, and subsequent support from EPSRC (EP/K039660/1; EP/M028127/1).
Afficher plus [+] Moins [-]Factors influencing microplastic abundances in the sediments of a seagrass-dominated tropical atoll | Factors influencing microplastic abundances in the sediments of a seagrass-dominated tropical atoll Texte intégral
2024
Radford, Freya | Horton, Alice A. | Felgate, Stacey | Lichtschlag, Anna | Hunt, James | Andrade, Valdemar | Sanders, Richard | Evans, Claire
Seagrass meadows are one of the world's most diverse ecosystems offering habitats for an extensive array of species, as well as serving as protectors of coral reefs and vital carbon sinks. Furthermore, they modify hydrodynamics by diminishing water flow velocities and enhancing sediment deposition, indicating the potential for microplastic accumulation in their sediments. The build-up of microplastics could potentially have ecological impacts threatening to ecosystems, however little is known about microplastic abundance and controlling factors in seagrass sediments. Here we investigated microplastic characteristics and abundances within sediments underlying four seagrass meadow sites on the Turneffe Atoll, Belize. Sediment cores were collected and sub-sampled to include a range of replicate surface sediments (0–4 cm) and depth cores (sediment depths 0–2, 2–5, 5–10, 10–20 and 20–30 cm). These were analysed using 25 μm resolution μFTIR, with spectral maps processed using siMPle software. Microplastics were prevalent across the sites with an abundance range (limit of detection (LOD) blank-corrected) of < LOD to 17137 microplastics kg−1 dw found on the east side of the atoll. However, their abundances varied greatly between the replicate samples. Polyethylene and polypropylene were the most commonly detected polymers overall, although the dominant polymer type varied between sites. There were no differences in the abundance of microplastics between sites, nor could abundance distributions be explained by seagrass cover. However, abundances of microplastics were highest in sediments with lower proportions of fine grained particles (clay, <4 μm) suggesting that hydrodynamics override seagrass effects. Additionally, no patterns were seen between microplastic abundance and depth of sediment. This suggests that microplastic abundance and distribution in seagrass meadows may vary significantly depending on the specific geographical locations within those meadows, and that more complex hydrodynamic factors influence spatial variability at a localised scale. | publishedVersion
Afficher plus [+] Moins [-]Mixture toxicity of 6PPD-quinone and polystyrene nanoplastics in zebrafish | Mixture toxicity of 6PPD-quinone and polystyrene nanoplastics in zebrafish Texte intégral
2024
Varshney, Shubham | Oconnor, Olivia Leal | Gora, Adnan Hussain | Rehman, Saima | Kiron, Viswanath | Siriyappagouder, Prabhugouda | Dahle, Dalia | Kögel, Tanja | Ørnsrud, Robin | Olsvik, Pål Asgeir
Mixture toxicity of 6PPD-quinone and polystyrene nanoplastics in zebrafish | Mixture toxicity of 6PPD-quinone and polystyrene nanoplastics in zebrafish Texte intégral
2024
Varshney, Shubham | Oconnor, Olivia Leal | Gora, Adnan Hussain | Rehman, Saima | Kiron, Viswanath | Siriyappagouder, Prabhugouda | Dahle, Dalia | Kögel, Tanja | Ørnsrud, Robin | Olsvik, Pål Asgeir
Plastic pollution, including micro- and nanoplastics, is a growing concern. Tyre-wear particles (TWPs) are the second largest source of microplastics in the ocean following abrasion of synthetic fibres. In addition to the particles themselves, TWPs contain many harmful chemicals, including 6PPD. This chemical reacts with atmospheric ozone and forms the toxic compound 6PPD-quinone (6PPDq), which poses a danger to aquatic life. There is a knowledge gap in understanding risks associated with the combined toxicity of nanoplastics (NPs) and 6PPDq. The present study aimed to investigate the toxicity of NPs and 6PPDq on adult zebrafish using phenotypic (behaviour, histology) and transcriptomic endpoints. Zebrafish were exposed to four treatments: control (contaminant-free), 50 μg/L 6PPDq, 3 mg/L polystyrene (PS)-NPs, and a combination of 50 μg/L 6PPDq and 3 mg/L PS-NPs. We did not observe locomotory dysregulation in zebrafish exposed to NPs. However, we found significant hyperlocomotion in zebrafish exposed to 6PPDq and this effect was even more substantial after co-exposure with PS-NPs. This study explores the molecular mechanisms behind these effects, identifying genes associated with neurotransmitters and fatty acid metabolism that were dysregulated by the co-exposure. Transcriptomic analysis further showed that both 6PPDq and PS-NPs impacted cellular processes associated with sterol biosynthesis, cholesterol metabolism, and muscle tissue development. The effects on these mechanisms were stronger in co-exposed zebrafish, indicating a heightened risk to cellular integrity and mitochondrial dysfunction. These results highlight the significance of mixture toxicity when studying the effects of NPs and associated chemicals like 6PPDq. | publishedVersion
Afficher plus [+] Moins [-]Mixture toxicity of 6PPD-quinone and polystyrene nanoplastics in zebrafish Texte intégral
2024
Varshney, Shubham | Oconnor, Olivia Leal | Gora, Adnan Hussain | Rehman, Saima | Kiron, Viswanath | Siriyappagouder, Prabhugouda | Dahle, Dalia | Kögel, Tanja | Ørnsrud, Robin | Olsvik, Pål Asgeir
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