Chado controller: advanced annotation management with a community annotation system
Droc, Gaëtan | Alaux, Michael | Baurens, Franc-Christophe | Garsmeur, Olivier | Poiron, Claire | Carver, Tim | Rouard, Mathieu
We developed a controller that is compliant with the Chado database schema, GBrowse and genome annotation-editing tools such as Artemis and Apollo. It enables the management of public and private data, monitors manual annotation ( with controlled vocabularies, structural and functional annotation controls) and stores versions of annotation for all modified features. The Chado controller uses PostgreSQL and Perl.
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Библиографическая информация
Bioinformatics 7 (28), 1054-1056. (2012)
Другие темы
Annotation génomique; Chado database schema
Язык
Английский
Тип
Journal Article
Корпоративный автор/ Групповой автор
Guignon, Valention
Bocs, Stéphanie
2016-10-15
AGRIS AP
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