Bioinformatic tools for exploring the SUMO gene network: An update
1000 | 2023
Castro, Pedro Humberto | Santos, Miguel Ângelo | Magalhães, Alexandre Papadopoulos | Tavares, R. M. | Azevedo, Herlander
Plant sumoylation research has seen significant advances in recent years, particularly since high-throughput proteomic strategies have enabled the discovery of more than one thousand SUMO targets. In the present chapter, we update the previously reported SUMO (small ubiquitin-related modifier) gene network (SGN) to its v4 iteration. SGN is a curated assembly of Arabidopsis thaliana genes that have been functionally associated with sumoylation, from SUMO pathway components to targets and interactors. The enclosed tutorial helps interpret and manage these datasets and details bioinformatic tools that can be used for in silico-based hypothesis generation. The latter include tools for sumoylation site prediction, comparative genomics, and gene network analysis.
Показать больше [+] Меньше [-]FCT -Fundação para a Ciência e a Tecnologia(POCI-01-0145-FEDER-031122)
Показать больше [+] Меньше [-]Ключевые слова АГРОВОК
Библиографическая информация
Эту запись предоставил Universidade do Minho UNMINHO
