Secondary salinisation of rivers and streams is a global and growing threat that might be amplified by climate change. It can have many different causes, like irrigation, mining activity or the use of salts as de-icing agents for roads. Freshwater organisms only tolerate certain ranges of water salinity. Therefore secondary salinisation has an impact at the individual, population, community and ecosystem levels, which ultimately leads to a reduction in aquatic biodiversity and compromises the goods and services that rivers and streams provide. Management of secondary salinization should be directed towards integrated catchment strategies (e.g. benefiting from the dilution capacity of the rivers) and identifying threshold salt concentrations to preserve the ecosystem integrity. Future research on the interaction of salinity with other stressors and the impact of salinization on trophic interactions and ecosystem properties is needed and the implications of this issue for human society need to be seriously considered.

Polychaete worms are abundant in many mudflats but their importance to coastal food web Hg biomagnification is not known. We sampled sediments and polychaete worms from mudflats in the Bay of Fundy to investigate the bioaccumulation of mercury (Hg) and methylmercury (MeHg) in the coastal invertebrate food web. Hg concentrations in the sediments were low (<20 μg kg−1). Labile Hg (methanol/KOH sediment extraction) in surface sediments (0–1 cm) was positively correlated with Hg bioaccumulation by surface sediment-ingesting polychaetes but, surprisingly, there was a negative correlation between δ15N (i.e. trophic level) and THg bioaccumulation factors in polychaete worms. Worms feeding on deeper sediments contained the greatest MeHg concentrations (69.6 μg kg−1). Polychaetes are an important vector for Hg biomagnification to the coastal avian food web. This research demonstrates that feeding depth and method of feeding are more important than trophic position or sediment Hg concentrations for predicting Hg bioaccumulation.

Dichlorodiphenyltrichloroethanes (DDTs) and heavy metals are ubiquitous contaminants with high bioaccumulation and persistence in the environment, which can have adverse effects on humans and animals. Although applications of DDTs have been banned in many countries, developing countries like Ethiopia are still using these for agricultural and medicinal purposes. In addition, heavy metals are naturally present in the aquatic environment and distributed globally. In this study, the occurrence, distribution, and ecological risk of DDTs and heavy metals in surface sediments from one of the Ethiopian rift valley lakes were studied. Twenty-five surface sediment samples from Lake Awassa, Ethiopia were collected and analyzed for DDTs and heavy metals. Results showed that concentrations of total DDTs ranged from 3.64 to 40.2 ng/g dry weight. High levels of DDTs were observed in the vicinity of inflow river side and coastal areas with agricultural activities. The heavy metals content were followed the order Zn > Ni > Pb > Cu > Cr > Co > As > Cd > Hg. Correlation analysis and principal components analysis demonstrated that heavy metals were originated from both natural and anthropogenic inputs. The levels of DDE and DDD in surface sediments exceeded the sediment quality guideline values, indicating that adverse effects may occur to the lake. A method based on toxic-response factor for heavy metals revealed that the calculated potential ecological risk indices showed low ecological risk for the water body.

The Three Gorges Dam on the Yangtze River in China has created a major reservoir in which the water level fluctuates annually by about 30 m, generating a drawdown zone of up to 350 km(2) in summer. Since construction of the dam, there has been scientific and public interest in how to use the drawdown zone resources in environmentally sustainable ways. To this end, and with government support, an international conference was held in Chongqing Municipality (China) in October 2011 on the subject of conservation and ecofriendly utilization of wetlands in the Three Gorges Reservoir. The conference proceedings were subsequently published in the Journal of Chongqing Normal University. The proceedings reports are reviewed here in the context of other relevant literature. The proceedings included papers on ecology, ecodesign and ecological engineering, erosion control, plant production and carbon sequestration, phytoremediation of pollution, hydrosystem management, and others. Several of the reports derive from experimental work conducted at a research field station on the Three Gorges Reservoir situated in Kaixian County, Chongqing Municipality. Plant communities in the drawdown zone are declining in diversity and evolving. Experimental plantings of flood-tolerant edible hydrophytes in a dike-pond system reveal their potential to provide economic returns for farmers, and flooding-tolerant trees, such as cypresses, also show promising results for stabilizing soils in the drawdown zone. Flood-tolerant natural plant communities vary strongly with depth and their composition provides useful indicators for revegetation strategies. In the region surrounding the reservoir, remnant natural broad-leaved evergreen forests are most effective in sequestering carbon, and within the drawdown zone, carbon is mostly stored below ground. There is strong interest in the potential of aquatic plants for removal of pollutants, notably N and P, from the reservoir water by means of floating beds. Other examples of applying ecodesign and ecological engineering strategies for restoration and management of rivers and lakes are also given. Scientific studies have provided valuable advice for ecofriendly utilization of the reservoir drawdown zone and further studies of the evolving condition of the reservoir can be expected to pay additional practical dividends.

In the last decade, various molecular methods (e.g., fluorescent hybridization assay, sandwich hybridization assay, automatized biosensor detection, real-time PCR assay) have been developed and implemented for accurate and specific identification and estimation of marine toxic microalgal species. This review focuses on the recent quantitative real-time PCR (qrt-PCR) technology developed for the control and monitoring of the most important taxonomic phytoplankton groups producing biotoxins with relevant negative impact on human health, the marine environment, and related economic activities. The high specificity and sensitivity of the qrt-PCR methods determined by the adequate choice of the genomic target gene, nucleic acid purification protocol, quantification through the standard curve, and type of chemical detection method make them highly efficient and therefore applicable to harmful algal bloom phenomena. Recent development of qrt-PCR-based assays using the target gene of toxins, such as saxitoxin compounds, has allowed more precise quantification of toxigenic species (i.e., Alexandrium catenella) abundance. These studies focus only on toxin-producing species in the marine environment. Therefore, qrt-PCR technology seems to offer the advantages of understanding the ecology of harmful algal bloom species and facilitating the management of their outbreaks.