Atrazine impact on human health and the environment have been extensively studied. Phytoremediation emerged as a low cost, environmental friendly biotechnological solution for atrazine pollution in soil and water. In vitro atrazine tolerance assays were performed and Lolium multiflorum was found as a novel tolerant species, able to germinate and grow in the presence of 1 mg kg⁻¹ of the herbicide. L. multiflorum presented 20% higher atrazine removal capacity than the natural attenuation, with high initial degradation rate in microcosms. The mechanisms involved in atrazine tolerance such as mutation in psbA gene, enzymatic detoxification via P₄₅₀ or chemical hydrolysis through benzoxazinones were evaluated. It was demonstrated that atrazine tolerance is conferred by enhanced enzymatic detoxification via P₄₅₀. Due to its atrazine degradation capacity in soil and its agronomical properties, L. multiflorum is a candidate for designing phytoremediation strategies for atrazine contaminated agricultural soils, especially those involving run-off avoiding. Finding of a novel atrazine-tolerant species, as a potential candidate for phytoremediating herbicide-contaminated agriculture soils and elucidation of the mechanisms involved in tolerance.

Glyphosate, introduced by Monsanto Company under the commercial name Roundup in 1974, became the extensively used herbicide worldwide in the last few decades. Glyphosate has excellent properties of fast sorption in soil, biodegradation and less toxicity to nontarget organisms. However, glyphosate has been reported to increase the risk of cancer, endocrine-disruption, celiac disease, autism, effect on erythrocytes, leaky-gut syndrome, etc. The reclassification of glyphosate in 2015 as ‘probably carcinogenic’ under Group 2A by the International Agency for Research on Cancer has been broadly circulated by anti-chemical and environmental advocacy groups claiming for restricted use or ban of glyphosate. In contrast, some comprehensive epidemiological studies involving farmers with long-time exposure to glyphosate in USA and elsewhere coupled with available toxicological data showed no correlation with any kind of carcinogenic or genotoxic threat to humans. Moreover, several investigations confirmed that the surfactant, polyethoxylated tallow amine (POEA), contained in the formulations of glyphosate like Roundup, is responsible for the established adverse impacts on human and ecological health. Subsequent to the evolution of genetically modified glyphosate-resistant crops and the extensive use of glyphosate over the last 45 years, about 38 weed species developed resistance to this herbicide. Consequently, its use in the recent years has been either restricted or banned in 20 countries. This critical review on glyphosate provides an overview of its behaviour, fate, detrimental impacts on ecological and human health, and the development of resistance in weeds and pathogens. Thus, the ultimate objective is to help the authorities and agencies concerned in resolving the existing controversies and in providing the necessary regulations for safer use of the herbicide. In our opinion, glyphosate can be judiciously used in agriculture with the inclusion of safer surfactants in commercial formulations sine POEA, which is toxic by itself is likely to increase the toxicity of glyphosate.

Clearfield® wheat (Triticum aestivum) have helped eliminate the toughest grasses and broadleaf weeds in Spain since 2005. This crop production system includes other tolerant cultivars to the application of imidazolinone (IMI) herbicides. However, the continuous use and off-label rates of IMI herbicides can contribute to the development of resistance in Lolium rigidum and other weed species. In this research, the main objectives were to study the resistance mechanisms to acetolactate synthase (ALS) and acetyl coenzyme A carboxylase (ACCase) inhibitors in a L. rigidum accession (LrR) from a Clearfield® wheat field, with a long history rotating these IMI-tolerant crops and compare them with those present in the IMI-tolerant wheat. The resistance to ACCase inhibitors in LrR was due to point mutations (Ile1781Leu plus Asp2078Gly) of the target site gene plus an enhanced herbicide metabolism (EHM), on the other hand, in wheat accessions was due only by EHM. Mechanisms involved in the resistance to ALS inhibitors were both point mutations of the target gene and EHM in the IMI-tolerant wheat, while only evidence of mutation (Trp574Leu) was found in the multiple herbicide resistant L. rigidum accession. This research demonstrates that if crop rotation is not accompanied by the use of alternative sites of action in herbicide-tolerant crops, resistant weeds to herbicide to which crops are tolerant, can easily be selected. Moreover, repeated and inappropriate use of Clearfield® crops and herbicide rotations can lead to the evolution of multiple resistant weeds, as shown in this study, and have also inestimable environmental impacts.

This study investigates the dynamics of glyphosate and AMPA in the soil surface layer of two fields growing glyphosate-resistant crops in the loess Pampas of Córdoba Province, Argentina. Glyphosate decay and AMPA formation/decay were studied after a single application, using decay kinetic models. Furthermore, glyphosate and AMPA concentrations were investigated in runoff to evaluate their off-site risk. During a 2.5-month study, cultivations of glyphosate-resistant soybean and maize received an application of 1.0 and 0.81 kg a.e. ha⁻¹, respectively, of Roundup UltraMax©. Topsoil samples (0–1, 1–2 cm) were collected weekly (including before application) and analysed for glyphosate, AMPA and soil moisture (SM) contents. Runoff was collected from runoff plots (3 m²) and weirs after 2 erosive rainfall events, and analysed for glyphosate and AMPA contents (water, eroded-sediment). Under both cultivations, background residues in soil before application were 0.27–0.42 mg kg⁻¹ for glyphosate and 1.3–1.7 mg kg⁻¹ for AMPA. In the soybean area, the single-first-order (SFO) model performed best for glyphosate decay. In the maize area, the bi-phasic Hockey-Stick (HS) model performed best for glyphosate decay, due to an abrupt change in SM regimes after high rainfall. Glyphosate half-life and DT₉₀ were 6.0 and 19.8 days, respectively, in the soybean area, and 11.1 and 15.4 days, respectively, in the maize area. In the soybean area, 24% of the glyphosate was degraded to AMPA. In the maize area, it was only 5%. AMPA half-life and DT₉₀ were 54.7 and 182 days, respectively, in the soybean area, and 71.0 and 236 days, respectively, in the maize area. Glyphosate and AMPA contents were 1.1–17.5 times higher in water-eroded sediment than in soil. We conclude that AMPA persists and may accumulate in soil, whereas both glyphosate and AMPA are prone to off-site transport with water erosion, representing a contamination risk for surface waters and adjacent fields.

Use of herbicides is one of the most preferred options for crop protection against weeds. Imazamox is an imidazolinone (IMI)-group herbicide, and even low concentrations of imazamox might exhibit high biological activities on soil and plants. Therefore, in contrast to the conventional types of sunflowers that are sensitive to IMI-group herbicides, sunflowers that are resistive to IMI-group herbicides were also developed in recent years. In this study, the effect of imazamox on some physiological and genetic parameters of two types of sunflowers that are sensitive and resistant to IMI-group herbicides is comparatively investigated. For this purpose, three concentrations of imazamox (0.82, 1.64 and 2.45 mM, respectively) were applied on the two types of sunflower (i.e. SN:8 as IMI-sensitive type and SN:9 as IMI-resistant type, respectively). In addition, the physiological and molecular effects of IMI on antioxidant enzymes (such as superoxide dismutase (SOD), catalase, glutathione S-transferase (GST)), heat shock proteins (such as HSP26, HSP60, HSP70), phenolic contents (coumaric acid, caffeic acid, ferulic acid), phytohormone levels (indole-3-acetic acid, jasmonic acid (JA), salicylic acid (SA)) and accumulation of pesticides in the leaf tissue of sunflowers were analysed by qRT-PCR and LC MS/MS analysis. In this study, the pesticide concentration of resistant-type SN9 was significantly greater than that of SN8 with the application of 1.64–2.45 mM of imazamox, and the total pesticide amounts were 1.6 and 1.8 times significantly higher in leaf tissues, respectively. This pesticide accumulation led to an imbalance in the phytohormone and phenolic levels, increased levels of unfolded or misfolded proteins, and selective reduction of the GST, SA and JA levels in the two types of sunflowers. However, SN9 significantly responded to the pesticide accumulation via the overexpression of mitochondrial chaperone HSP60 (16.15-fold) and stress-specific HSP70 (54.46-fold), as well as higher SOD expression and SA and JA levels. In particular, by the application of high-dose IMI, our data revealed strong protein chaperone response, a high level of SOD expression, and finally the crosstalk of SA and JA, and these physiological and molecular phenomena can be indicative of pesticide-induced stress in SN9. The study suggested that high-concentration imazamox treatment induces some physiological and genetic changes at the phytotoxic level on not only IMI sensitive type but also resistant type.

Herbicide-tolerant (HT) crops such as those tolerant to glyphosate simplify weed management and make it more efficient, at least at short-term. Overreliance on the same herbicide though leads to the spread of resistant weeds. Here, the objective was to evaluate, with simulations, the impact on the advent of glyphosate resistance in weeds of modifications in agricultural practises resulting from introducing HT maize into cropping systems. First, we included a single-gene herbicide resistance submodel in the existing multispecific FLORSYS model. Then, we (1) simulated current conventional and probable HT cropping systems in two European regions, Aquitaine and Catalonia, (2) compared these systems in terms of glyphosate resistance, (3) identified pertinent cultural practises influencing glyphosate resistance, and (4) investigated correlations between cultural practises and species traits, using RLQ analyses. The simulation study showed that, during the analysed 28 years, (1) glyphosate spraying only results in glyphosate resistance in weeds when combined with other cultural factors favouring weed infestation, particularly no till; (2) pre-sowing glyphosate applications select more for herbicide resistance than post-sowing applications on HT crops; and (3) glyphosate spraying selects more for species traits avoiding exposure to the herbicide (e.g. delayed early growth, small leaf area) or compensating for fitness costs (e.g. high harvest index) than for actual resistance to glyphosate, (4) actual resistance is most frequent in species that do not avoid glyphosate, either via plant size or timing, and/or in less competitive species, (5) in case of efficient weed control measures, actual resistance proliferates best in outcrossing species. An advice table was built, with the quantitative, synthetic ranking of the crop management effects in terms of glyphosate-resistance management, identifying the optimal choices for each management technique.

Weeds are a major constraint to crop production and a barrier to human efforts to meet the ever-rising global demand for food, fibre and fuel. Managing weeds solely with herbicides is unsustainable due to the rapid evolution of herbicide-resistant weeds. Precise knowledge of the ecology and biology of weeds is of utmost importance to determine the most appropriate nonchemical management techniques. Raphanus raphanistrum L. is an extremely invasive and noxious weed due to its prolific seed production, allelopathic potential, multiple herbicide resistance and biological potential. R. raphanistrum causes high crop yield losses and thus has become one of the most troublesome agricultural and environmental weeds. R. raphanistrum could exchange pollen with herbicide-tolerant canola and could become an environmental threat. This weed has evolved resistance to many herbicides, and relying exclusively on herbicide-based management could lead to severe crop loss and uneconomical cropping. Although reviews are available on the ecology and biology of R. raphanistrum, significant changes in tillage, weed management and agronomic practices have been occurring worldwide. Therefore, it is timely to review the status of noxious weeds in different agro-ecological zones and management scenarios. This review focuses on the response of R. raphanistrum to different cultural, mechanical, biological, chemical and integrated management strategies practiced in various agro-ecosystems, and its biological potential to thrive under different weed management tactics. In addition, this review facilitates a better understanding of R. raphanistrum and describes how weed management outcomes could be improved through exploiting the biology and ecology of the weed.

Overreliance on the same herbicide mode of action leads to the spread of resistant weeds, which cancels the advantages of herbicide-tolerant (HT) crops. Here, the objective was to quantify, with simulations, the impact of glyphosate-resistant (GR) weeds on crop production and weed-related wild biodiversity in HT maize-based cropping systems differing in terms of management practices. We (1) simulated current conventional and probable HT cropping systems in two European regions, Aquitaine and Catalonia, with the weed dynamics model FLORSYS; (2) quantified how much the presence of GR weeds contributed to weed impacts on crop production and biodiversity; (3) determined the effect of cultural practices on the impact of GR weeds and (4) identified which species traits most influence weed-impact indicators. The simulation study showed that during the analysed 28 years, the advent of glyphosate resistance had little effect on plant biodiversity. Glyphosate-susceptible populations and species were replaced by GR ones. Including GR weeds only affected functional biodiversity (food offer for birds, bees and carabids) and weed harmfulness when weed effect was initially low; when weed effect was initially high, including GR weeds had little effect. The GR effect also depended on cultural practices, e.g. GR weeds were most detrimental for species equitability when maize was sown late. Species traits most harmful for crop production and most beneficial for biodiversity were identified, using RLQ analyses. None of the species presenting these traits belonged to a family for which glyphosate resistance was reported. An advice table was built; the effects of cultural practices on crop production and biodiversity were synthesized, explained, quantified and ranked, and the optimal choices for each management technique were identified.

Transgenic Arabidopsis thaliana plants were generated by introduction of the human P450 CYP1A2 gene, which metabolizes a number of herbicides, insecticides and industrial chemicals. Transgenic A. thaliana plants expressing CYP1A2 gene showed remarkable resistance to the phenylurea herbicide chlortoluron (CTU) supplemented either in plant growth medium or sprayed on foliar parts of the plants. HPLC analyses showed a strong reduction in CTU accumulation in planta supporting the tolerance of transgenic lines to high concentrations of CTU. Besides increased herbicide tolerance, expression of CYP1A2 resulted in no other visible phenotype in transgenic plants. Our data indicate that CYP1A2 can be used as a selectable marker for plant transformation, allowing efficient selection of transgenic lines in growth medium and/or in soil-grown plants. Moreover, these transgenic plants appear to be useful for herbicide resistance as well as phytoremediation of environmental contaminants.

Background, aim and scope In a gradualist approach to the introduction of crop biotechnology, the findings of experimentation at one scale are used to predict the outcome of moving to a higher scale of deployment. Movement through scales had occurred for certain genetically modified herbicide-tolerant (GMHT) crops in the UK as far as large-scale field trials. However, the land area occupied by these trials was still <1% of the area occupied by the respective non-GM crops. Some means is needed to predict the direction and size of the effect of increasing the area of GMHT cropping on ecological variables such as the diversity among species and trophic interactions. Species-accumulation curves are examined here as a method of indicating regional-scale impacts on botanical diversity from multiple field experiments. Materials and methods Data were used from experiments on the effect of (GMHT) crops and non-GM, or conventional, comparators in fields sown with four crop types (beet, maize, spring and winter oilseed rape) at a total of 250 sites in the UK between 2000 and 2003. Indices of biodiversity were measured in a split-field design comparing GMHT with the farmers' usual weed management. In the original analyses based on the means at site level, effects were detected on the mass of weeds in the three spring crops and the proportion of broadleaf and grass weeds in winter oilseed rape, but not on indices of plant species diversity. To explore the links between site means and total taxa, accumulation curves were constructed based on the number of plant species (a pool of around 250 species in total) and the number of plant functional types (24), inferred from the general life-history characteristics of a species. Results Species accumulation differed between GMHT and conventional treatments in direction and size, depending on the type of crop and its conventional management. Differences were mostly in the asymptote of the curve, indicative of the maximum number of species found in a treatment, rather than the steepness of the curve. In winter oilseed rape, 8% more species were accumulated in the GMHT treatment, mainly as a result of the encouragement of grass species by the herbicide when applied in the autumn. (Overall, GMHT winter oilseed rape had strong negative effects on both the food web and the potential weed burden by increasing the biomass of grasses and decreasing that of broadleaf weeds.) In maize, 33% more species--a substantial increase--were accumulated in the GMHT than in the conventional, consistent with the latter's highly suppressive weed management using triazine herbicides. In the spring oilseed rape and beet, fewer species (around 10%) were accumulated in the GMHT than the conventional. The GMHT treatments did not remove or add any functional (life history) types, however. Differences in species accumulation between treatments appeared to be caused by loss or gain of rarer species. The generality of this effect was confirmed by simulations of species accumulation in which the species complement at each of 50 sites was drawn from a regional pool and subjected to reducing treatment at each site. Shifts in the species-accumulation parameters, comparable to those measured, occurred only when a treatment removed the rarer species at each site. Discussion Species accumulation provided a set of simple curve-parameters that captured the net result of numerous local effects of treatments on plant species and, in some instances, the balance between grass and broadleaf types. The direction of effect was not the same in the four crops and depended on the severity of the conventional treatment and on complex interactions between season, herbicide and crop. The accumulation curves gave an indication of potential positive or negative consequences for regional species pools of replacing a conventional practice with GMHT weed management. In this and related studies, a range of indicators, through which diversity was assessed by both species and functional type, and at both site and regional scales, gave more insight into effects of GMHT treatment than provided by any one indicator. Conclusions Species accumulation was shown to discriminate at the regional scale between agronomic treatments that had little effect on species number at the field scale. While a comprehensive assessment of GM cropping needs to include an examination of regional effects, as here, the costs of doing this in all instances would be prohibitive. Simulations of diversity-reducing treatments could provide a theoretical framework for predicting the likely regional effects from in-field plant dynamics. Recommendations and perspectives Accumulation curves potentially offer a means of linking within-site effects to regional impacts on biodiversity resulting from any change in agricultural practice. To guide empirical measurement, there is a scope to apply a methodology such as individual-based modelling at the field scale to explore the links between agronomic treatments and the relative abundance of plant types. The framework needs to be validated in practice, using species-based and functional taxonomies, the latter defined by measured rather than inferred traits.