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Environmental DNA metabarcoding reveals estuarine benthic community response to nutrient enrichment – Evidence from an in-situ experiment
2020
Clark, D.E. | Pilditch, C.A. | Pearman, J.K. | Ellis, J.I. | Zaiko, A.
Nutrient loading is a major threat to estuaries and coastal environments worldwide, therefore, it is critical that we have good monitoring tools to detect early signs of degradation in these ecologically important and vulnerable ecosystems. Traditionally, bottom-dwelling macroinvertebrates have been used for ecological health assessment but recent advances in environmental genomics mean we can now characterize less visible forms of biodiversity, offering a more holistic view of the ecosystem and potentially providing early warning signals of disturbance. We carried out a manipulative nutrient enrichment experiment (0, 150 and 600 g N fertilizer m⁻²) in two estuaries in New Zealand to assess the effects of nutrient loading on benthic communities. After seven months of enrichment, environmental DNA (eDNA) metabarcoding was used to examine the response of eukaryotic (18S rRNA), diatom only (rbcL) and bacterial (16S rRNA) communities. Multivariate analyses demonstrated changes in eukaryotic, diatom and bacterial communities in response to nutrient enrichment at both sites, despite differing environmental conditions. These patterns aligned with changes in macrofaunal communities identified using traditional morphological techniques, confirming concordance between disturbance indicators detected by eDNA and current monitoring approaches. Clear shifts in eukaryotic and bacterial indicator taxa were seen in response to nutrient loading while changes in diatom only communities were more subtle. Community changes were discernible between 0 and 150 g N m⁻² treatments, suggesting that estuary health assessment tools could be developed to detect early signs of degradation. Increasing variation in community structure associated with nutrient loading could also be used as an indicator of stress or approaching tipping points. This work represents a first step towards the development of molecular-based estuary monitoring tools, which could provide a more holistic and standardized approach to ecosystem health assessment with faster turn-around times and lower costs.
Показать больше [+] Меньше [-]Estimation of the soil hazardous concentration of methylparaben using a species sensitivity approach
2018
Kim, Dokyung | Cui, Rongxue | Moon, Jongmin | Kwak, Jin Il | Kim, Shin Woong | Kim, Dasom | An, Youn-Joo
Methylparaben, which is known to be an endocrine-disrupting chemical, is added to various personal care products, including cosmetics, and is also used as a food preservative and in pharmaceuticals. However, information on the toxicity of methylparaben in soil ecosystems is limited. Furthermore, unlike other substances such as metals and pesticides, there is no regulation of levels or safe concentrations of methylparaben in soil ecosystems. Therefore, the aims of this study were to evaluate the toxicity of methylparaben on soil species and to derive hazardous concentration (HC) values with respect soil ecosystem protection. We conducted acute bioassays on eight species within six taxonomic groups and chronic bioassays on five species within four taxonomic groups. On the basis of the results obtained, we derived an acute HC₅ value of 44 mg/kg soil and a corresponding chronic value of 27 mg/kg soil for methylparaben using species sensitivity distribution methodology following Australian and New Zealand guidelines. Given that there has been no proposed standard value for methylparaben in soil in any country, it was not possible to compare the HC values calculated in this study with regulation standard levels. Nevertheless, to our knowledge, this study is first to assess the toxicity of methylparaben against soil-inhabiting species and to estimate acute and chronic HCs for soil fauna and flora. The results of this study will provide valuable fundamental data for the establishment of acceptable levels of methylparaben in soil.
Показать больше [+] Меньше [-]Predictors of pesticide concentrations in freshwater trout – The role of life history
2016
Scholes, Rachel C. | Hageman, Kimberly J. | Closs, Gerry | Stirling, Claudine H. | Reid, Malcolm R. | Gabrielsson, Rasmus | Augspurger, Jason M.
Concentrations of halogenated pesticides in freshwater fish can be affected by age, size, trophic position, and exposure history. Exposure history may vary for individual fish caught at a single location due to different life histories, e.g. they may have hatched in different tributaries before migrating to a specific lake. We evaluated correlations of pesticide concentrations in freshwater brown trout (Salmo trutta) from the Clutha River, New Zealand, with potential predictors including capture site, age, length, trophic level, and life history. Life history was determined from otolith (fish ear bone) strontium isotope signatures, which vary among tributaries in the region of our study. Variability in pesticide concentrations between individual fish was not well explained by capture site, age, length, or trophic level. However, hexachlorobenzene (HCB) and chlorpyrifos concentrations were distinct in lake-based trout with different life histories. Additionally, one of the riverine life histories was associated with relatively high concentrations of total endosulfans. Linear models that included all potential predictor variables were evaluated and the resulting best models for HCB, chlorpyrifos, and total endosulfans included life history. These findings show that in cases where otolith isotope signatures vary geographically, they can be used to help explain contaminant concentration variations in fish caught from a single location.
Показать больше [+] Меньше [-]Hexabromocyclododecane flame retardant in Antarctica: Research stations as sources
2015
Chen, Da | Hale, Robert C. | La Guardia, Mark J. | Luellen, Drew | Kim, Stacy | Geisz, Heidi N.
Historical persistent organic pollutants (POPs) are banned from Antarctica under international treaty; but contemporary-use POPs can enter as additives within polymer and textile products. Over their useful lives these products may release additives in-situ. Indeed, we observed 226 and 109 ng/g dry weight (dw) of the total concentrations of α-, β- and γ-hexabromocyclododecane (HBCD) in indoor dust from McMurdo Station (U.S.) and Scott Station (New Zealand), respectively. Sewage sludge collected from wastewater treatment facilities at these stations exhibited ∑HBCD of 45 and 69 ng/g dw, respectively. Contaminants originally within the bases may exit to the local outdoor environment via wastewaters. Near McMurdo, maximum ∑HBCD levels in surficial marine sediments and aquatic biota (invertebrates and fish) were 2350 ng/g (total organic carbon basis) and 554 ng/g lipid weight, respectively. Levels declined with distance from McMurdo. Our results illustrate that Antarctic research stations serve as local HBCD sources to the pristine Antarctic environment.
Показать больше [+] Меньше [-]Anthropogenic and natural sources of acidity and metals and their influence on the structure of stream food webs
2012
Hogsden, Kristy L. | Harding, Jon S.
We compared food web structure in 20 streams with either anthropogenic or natural sources of acidity and metals or circumneutral water chemistry in New Zealand. Community and diet analysis indicated that mining streams receiving anthropogenic inputs of acidic and metal-rich drainage had much simpler food webs (fewer species, shorter food chains, less links) than those in naturally acidic, naturally high metal, and circumneutral streams. Food webs of naturally high metal streams were structurally similar to those in mining streams, lacking fish predators and having few species. Whereas, webs in naturally acidic streams differed very little from those in circumneutral streams due to strong similarities in community composition and diets of secondary and top consumers. The combined negative effects of acidity and metals on stream food webs are clear. However, elevated metal concentrations, regardless of source, appear to play a more important role than acidity in driving food web structure.
Показать больше [+] Меньше [-]CO₂ emissions from farm inputs “Case study of wheat production in Canterbury, New Zealand”
2012
Safa, Majeed | Samarasinghe, Sandhya
This review paper concentrates on carbon dioxide emissions, discussing its agricultural sources and the possibilities for minimizing emissions from these sources in wheat production in Canterbury, New Zealand. This study was conducted over 35,300 ha of irrigated and dryland wheat fields in Canterbury. Total CO₂ emissions were 1032 kg CO₂/ha in wheat production. Around 52% of the total CO₂ emissions were released from fertilizer use and around 20% were released from fuel used in wheat production. Nitrogen fertilizers were responsible for 48% (499 kg CO₂/ha) of CO₂ emissions. The link between nitrogen consumption, CO₂ emissions and crop production showed that reducing the CO₂ emissions would decrease crop production and net financial benefits to farmers.
Показать больше [+] Меньше [-]Validation and application of a modified QuEChERS method for extracting neonicotinoid residues from New Zealand maize field soil reveals their persistence at nominally hazardous concentrations
2019
Pook, Chris | Gritcan, Iana
The widespread use of neonicotinoid insecticides is controversial due to their persistence in the environment and concerns the long-term consequences of their use. We present a simple, low-cost method for the sensitive and efficient extraction of three important neonicotinoids from soil with a detection limit <1 ng g−1 wet soil. We have validated this method by applying it to uncontaminated soil samples spiked with thiamethoxam, clothianidin and imidacloprid at environmentally concentrations. Absolute recoveries were >80% for thiamethoxam, clothianidin and imidacloprid. We also applied the method to soil samples collected from maize fields in New Zealand's North Island and found imidacloprid in 43 out of 45 samples and clothianidin in every one. Mean imidacloprid concentrations varied from 0.5 to 9.4 ng g−1 (wet weight) and clothianidin from 2.1 to 26.7 ng g−1 (wet weight). Imidacloprid concentrations exceed the New Zealand Environmental Protection Agency's Environmental Exposure Limit of 1 ng g−1 (dry weight) at eight of the nine sites sampled. These results are also remarkable because we have detected multiple neonicotinoid residues at every site. Imidacloprid residues appear to persist at significant concentrations at five of our sites from an application at least two years previous. This is only the third study to report the presence of neonicotinoid residues in NZ's environment and the first to show that those residues are persistent in the environment at nominally hazardous concentrations.
Показать больше [+] Меньше [-]Photons and foraging: Artificial light at night generates avoidance behaviour in male, but not female, New Zealand weta
2018
Farnworth, Bridgette | Innes, John | Kelly, Catherine | Littler, Ray | Waas, Joseph R.
Avoiding foraging under increased predation risk is a common anti-predator behaviour. Using artificial light to amplify predation risk at ecologically valuable sites has been proposed to deter introduced mice (Mus musculus) and ship rats (Rattus rattus) from degrading biodiversity in island ecosystems. However, light may adversely affect native species; in particular, little is known about invertebrate responses to altered lighting regimes. We investigated how endemic orthopterans responded to artificial light at Maungatautari Ecological Island (Waikato, New Zealand). We predicted that based on their nocturnal behaviour, ecology and evolutionary history, tree weta (Hemideina thoracica) and cave weta (Rhaphidophoridae) would reduce their activity under illumination. Experimental stations (n = 15) experienced three evenings under each treatment (order randomised): (a) light (illuminated LED fixture), (b) dark (unilluminated LED fixture) and (c) baseline (no lighting fixture). Weta visitation rates were analysed from images captured on infra-red trail cameras set up at each station. Light significantly reduced the number of observations of cave (71.7% reduction) and tree weta (87.5% reduction). In observations where sex was distinguishable (53% of all visits), male tree weta were observed significantly more often (85% of visits) than females (15% of visits) and while males avoided illuminated sites, no detectable difference was observed across treatments for females. Sex could not be distinguished for cave weta. Our findings have implications for the use of light as a novel pest management strategy, and for the conservation of invertebrate diversity and abundance within natural and urban ecosystems worldwide that may be affected by light pollution.
Показать больше [+] Меньше [-]Co-contaminants and factors affecting the sorption behaviour of two sulfonamides in pasture soils
2013
Srinivasan, Prakash | Sarmah, Ajit K. | Manley-Harris, Merilyn
We investigated the effect of soil pH, organic carbon, ionic strength and steroid hormones on the sorption of sulfamethoxazole (SMO) and sulfachloropyridazine (SCP) in three pastoral soils of New Zealand. A model linking sorbate speciation with species-specific sorption coefficients describing the pH dependence of the apparent sorption coefficients was used to derive the fraction of each species of SMO. All soils displayed a decrease in sorption when pH was increased, with SMO exhibiting the highest sorption at pH 2. The cationic form of SMO appeared to sorb more close to pH ≥ pKa1 and, when pH ≥ pKa2 (6.5, 7.5 and 8.5) the anionic species seems to dominate, however, its sorption affinity to all soils was low. SMO sorption was affected by ionic strengths and organic carbon content, while the presence of hormones showed only a subtle decrease in SCP sorption in a selected model pasture soil.
Показать больше [+] Меньше [-]Assessing the nature of the combined effects of copper and zinc on estuarine infaunal communities
2011
Fukunaga, Atsuko | Anderson, Marti J. | Webster-Brown, Jenny G.
Elevated levels of copper and zinc in sediment have been shown to adversely affect estuarine infauna. We investigated the additivity of the combined effects of copper and zinc on infaunal recolonisation through a manipulative field experiment in Orewa estuary, New Zealand, using defaunated sediment discs treated with these metals. The nature of their combined effects varied among infaunal taxa and the particular variables being examined. Additive effects were detected for species richness, for the mean log abundances of the polychaetes Prionospio sp. and Scoloplos cylindrifer and for the multivariate response of the community as a whole. Antagonistic effects were detected for the mean log abundances of total infauna and the polychaete Heteromastus sp. Characterising the potentially interactive nature of the combined effects of multiple heavy metals is essential in order to build predictive models of future environmental impacts of metal accumulation in estuarine sediments.
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