peer reviewed | Soil-borne diseases have become increasingly problematic for farmers producing crops intensively under protected agriculture. Although soil fumigants are convenient and effective for minimizing the impact of soil-borne disease, they are most often detrimental to beneficial soil microorganisms. Previous research showed that bio-activation of soil using biological control agents present in biofertilizers or organic fertilizers offered promise as a strategy for controlling soil-borne pathogens when the soil was bio-activated after fumigation. Our research sought to determine how bio-activation can selectively inhibit pathogens while promoting the recovery of beneficial microbes. We monitored changes in the soil's physicochemical properties, its microbial community and reductions in soil-borne pathogens. We found that the population density of Fusarium and Phytophthora were significantly reduced and tomato yield was significantly increased when the soil was bio-activated. Soil pH and soil catalase activity were significantly increased, and the soil's microbial community structure was changed, which may have enhanced the soil's ability to reduce Fusarium and Phytophthora. Our results showed that soil microbial diversity and relative abundance of beneficial microorganisms (such as Sphingomonas, Bacillus, Mortierella and Trichoderma) increased shortly after bio-activation of the soil, and were significantly and positively correlated with pathogen suppression. The reduction in pathogens may have been due to a combination of fumigation-fertilizer that reduced pathogens directly, or the indirect effect of an optimized soil microbiome that improved the soil's non-biological factors (such as soil pH, fertility structure), enhanced the soil's functional properties and increased tomato yield.

peer reviewed | The effects of chronically enhanced (NH(4))(2)SO(4) deposition on ion concentrations in soil solution and ionic fluxes were investigated in a Picea abies plot at Grizedale forest, NW England. Soil cores closed at the base and containing a ceramic suction cup sampler were 'roofed' and watered every 2 weeks with bulk throughfall collected in the field. Treatments consisted of the inclusion of living roots from mature trees in the lysimeters and increasing (NH(4))(2)SO(4) deposition (NS treatment) to ambient + 75 kg N ha(-1) a(-1). Rainfall, throughfall and soil solutions were collected every 2 weeks during 18 months, and analysed for major cations and anions. NO(3)(-) fluxes significantly increased following NS treatment, and were balanced by increased Al(3+) losses. Increased SO(4)(2-) concentrations played a minor role in controlling soil solution cation concentrations. The soil exchange complex was dominated by Al and, during the experimental period, cores of all treatments 'switched' from Ca(2+) to Al(3+) leaching, leading to mean [Formula: see text] molar ratios in soil solution of NS treated cores of 0.24. The experiment confirmed that the most sensitive soils to acidification (through deposition or changing environmental conditions) are those with low base saturation, and with a pH in the lower Ca, or Al buffer ranges.

peer reviewed | The effects of enhanced (NH4)(2)SO4 (NS) deposition on Norway spruce (Picea abies [L.] Karst) fine root biomass, vitality and chemistry were investigated using root-free in-growth cores reproducing native organic and mineral soil horizons. The cores were covered and watered every 2 weeks with native throughfall or throughfall supplemented with NS to increase deposition by 75 kg ha(-1) a(-1) NH4+-N (86 kg ha(-1) a(-1) SO42--S). The in-growth cores were sampled after 19 months and assessed for root biomass, necromass, length, tip number, tip vitality and fine root chemistry. Root biomass and fine root aluminium (Al) concentration were negatively correlated, but NS deposition had no effect on root growth or root tip vitality. NS deposition caused increased fine root nitrogen (N) concentrations in the organic horizon and increased Calcium (Ca) concentrations in the mineral horizon. Fine root biomass was higher in the organic horizon, where fine root Al and potassium (K) concentrations were lower and Ca concentrations higher than in the mineral horizon. Results highlighted the importance of soil stratification on fine root growth and chemical composition.

peer reviewed | Polycyclic aromatic hydrocarbons (PAH) are persistent organic compounds of major concern that accumulate in the environment, especially soils, and require remediation. Researches to develop bioremediation and phytoremediation (alternative eco-friendly technologies) are being conducted. First, a bioaccessibility measurement protocol was adapted to a brownfield soil using Tenax® beads in order to compare PAHs bioaccessibility in soil samples. PAHs desorption kinetics were established, described by a site distribution model, and a common extraction time was calculated (48 h). Second, the role of two Fabaceae (Medicago sativa L. or Trifolium pratense L.) root exudates in enhancing PAHs bioaccessibility and biodegradation in the studied soil was evaluated during microcosms experiments (28 °C). The CO2 emissions were significantly higher in presence of T. pratense exudates; the dehydrogenase activities showed improvements of the soil microbial activity in presence of two types of root exudates compared to untreated soil samples; the PAHs residual contents decreased more in untreated samples than in the presence of T. pratense exudates; and M. sativa exudates lowered PAHs bioaccessibility but not residual contents.

peer reviewed | The critical load concept is now widely used as a tool for developing emission control policies in Europe. As a signatory country of the Convention of Long-Range Transboundary Air Pollution, critical loads for acidity, nutrient nitrogen, nitrogen and sulphur have been calculated for the Flemish and Walloon regions in Belgium. This paper describes the methodology used for estimating critical loads for forest soils in the Walloon region according to the Steady-State Mass Balance equations. As an example the methodology was applied to the catchment `Waroneu', situated in a sensitive area of the Haute Ardenne. Main input parameters to the equations were derived from precipitation and runoff data of the catchment study. Improved estimates of nitrogen uptake (Nu) and base cation uptake (BCu) were obtained by intensive sampling of Picea abies and Quercus robur trees. Nutrient contents (Ca, Mg, K, N) and nutrient to nitrogen ratios of Picea abies reflected the poor soil quality at a site with high N deposition. Quercus robur nutrient contents increased from stem to higher order branches with a high proportion of nutrients located in the bark. However the simulation of stem only harvesting had a minor effect on critical loads. Measured wood densities were lower than reported literature values with a main effect on Nu and BCu estimates. The use of recommended default values and/or data derived from the experimental site resulted in a wide range of critical loads, some of which were largely overestimated. Results demonstrated the importance of site specific data for critical load calculations.

peer reviewed | Epoxiconazole is a broad-spectrum fungicide described as highly persistent in soil and as such can be considered as an abiotic agent like other problematic agrochemicals. Furthermore, the plant phenotyping tool involving non-invasive monitoring of plant-emitted volatile organic compounds (VOCs) may be useful in the identification of metabolic markers for abiotic stress. We therefore decided to profile the VOCs from secondary metabolism of oilseed rape through a dose-response experiment under several epoxiconazole concentrations (0, 0.01, 0.1 and 1 mg L−1). VOC collections of 35-day-old whole plantlets were performed through a dynamic headspace sampling technique under defined and controlled conditions. The plantlets grew freely within a home-made, laboratory and high-throughput glass chamber without any disturbance. Putative metabolic markers were analysed using a targeted metabolomic approach based on TD-GC-MS method coupled with data acquisition in SIM mode in order to focus on terpenes and sulphur-containing volatiles. Chromatograms of emitted terpenes were achieved accurately for the 35-day-old oilseed rape plantlets. We also analysed the presence of sulphur-containing volatiles in samples of shoot and root tissues using an innovative DHS-TD-GC-MS method, but no difference was found between qualitative profiles. Nevertheless, we demonstrated through this experiment that sesquiterpenes such as β-elemene and (E,E)-α-farnesene are involved in epoxiconazole dose-response. In particular, (E,E)-α-farnesene could serve as a metabolic marker of fungicide exposure for oilseed rape plantlets.

This study examines the common ground between current scientific knowledge and stakeholders’ perception of ecosystem services in mixed forests versus monocultures. An enquiry was performed within the frame of the project FORBIO aiming at the ‘Assessment of the effects of tree species BIOdiversity on FORest ecosystem functioning’ (http://forbio.biodiversity.be). The objective of this enquiry was to confront the perception of the influence of mixed species stands on ecosystem services in Belgium with actual scientific knowledge. The target groups were forest managers, users and scientists. As a general frame for the questionnaire, the ‘Millenium Ecosystem Assessment’, assessing the consequences of ecosystem change for human well-being, was selected. Respondents were asked to express their degree of agreement with statements related to the provisioning (production/quality, financial return), supporting (biodiversity, nutrient cycling, resistance), regulating (climate, air, soil, water) and cultural (aesthetics, recreation) ecosystem services, comparing mixed species to pure stands. Other questions addressed management objectives and the general profile of participants. The web-based questionnaires (SurveyMonkey) were established in Flemish and in French and invitations to respond were distributed by e-mail among key contact persons of forestry/nature associations, forest managers and scientists. After one month, a total of 142 and 228 responses were collected for the questionnaire in Flemish and in French, respectively. In this paper, we summarize main results by analyzing the profile of respondents and describing their perception of forest ecosystem services. Through the confrontation of this perception with the current scientific knowledge and through the identification of established scientific facts unknown to the general public, we identify gaps in scientific knowledge and ways of improving communication between scientists and managers. | FORBIO: Assessment of the effects of tree species BIOdiversity on FORest ecosystem functioning’

The increased inorganic nitrogen (N) deposition in the last decades has become a major concern for the health of forests. In forest ecosystem, where N might no longer be limiting to primary production, the excess N is thought to be related to forest decline and a concept of ‘N saturation ‘ has been developed. In particular, N, in the form of NH4, in excess to plant and microbial demands could lead to soil acidification if nitrified in the soil and leached, causing loss of base cations or mobilisation of phytotoxic aluminium. As part of the CORE project (CEC), investigating nutrient dynamics in European coniferous forest soils, we studied the effects of continuously increased (NH4)2SO4 deposition and soil characteristics on Norway spruce (Picea abies [L.] Karst) and Scots pine (Pinus sylvestris L.) fine root biomass, vitality and chemistry with an ingrowth core technique. The same experiment was performed in a Norway spruce stand on clay soil (Grizedale, UK) and a Scots pine stand on sandy soil (Wekerom, NL), using soil from each of the two sites. Root-free ingrowth cores reproduced organic and mineral soil horizons to 15 cm depth. They were covered to exclude native throughfall and watered every 2 weeks with throughfall or throughfall with (NH4)2SO4 added to increase deposition by 75 kg ha-1 a-1 NH4+-N. The ingrowth cores were sampled after 19 months, divided into layers, roots washed and analysed for biomass, necromass, root length, root tip number (RTN), root tip vitality and fine root chemistry. A previous field experiment had shown high soil solution Al concentrations at both sites, and an increase in NO3- and Al concentrations in response to increased (NH4)2SO4 deposition at the Grizedale site. The effects of high (NH4)2SO4 deposition depended on tree species, soil type and soil horizon. For Norway spruce, (NH4)2SO4 deposition did not result in any significant changes in root growth or vitality when growing into the native clay soil. However, when growing into the sandy soil, RTN and the proportion of dead roots were increased by N deposition. Norway spruce fine root N content was also increased in the organic horizon of both soil types. For Scots pine, (NH4)2SO4 treatment caused increased fine root Al content and a decreased Mg/Al ratio in the mineral layer of the sandy soil, with opposite effects in the clay soil. This (NH4)2SO4 treatment effect in the sandy soil for Scots pine was the only indication of a potential adverse effect of (NH4)2SO4 deposition on fine roots. Further results demonstrated the dominant importance of inherent soil characteristics and the stratification into soil horizons on fine root growth and chemical composition. For example, a negative correlation between root biomass and fine root Al content was established for Norway spruce.