peer reviewed | Epoxiconazole is a broad-spectrum fungicide described as highly persistent in soil and as such can be considered as an abiotic agent like other problematic agrochemicals. Furthermore, the plant phenotyping tool involving non-invasive monitoring of plant-emitted volatile organic compounds (VOCs) may be useful in the identification of metabolic markers for abiotic stress. We therefore decided to profile the VOCs from secondary metabolism of oilseed rape through a dose-response experiment under several epoxiconazole concentrations (0, 0.01, 0.1 and 1 mg L−1). VOC collections of 35-day-old whole plantlets were performed through a dynamic headspace sampling technique under defined and controlled conditions. The plantlets grew freely within a home-made, laboratory and high-throughput glass chamber without any disturbance. Putative metabolic markers were analysed using a targeted metabolomic approach based on TD-GC-MS method coupled with data acquisition in SIM mode in order to focus on terpenes and sulphur-containing volatiles. Chromatograms of emitted terpenes were achieved accurately for the 35-day-old oilseed rape plantlets. We also analysed the presence of sulphur-containing volatiles in samples of shoot and root tissues using an innovative DHS-TD-GC-MS method, but no difference was found between qualitative profiles. Nevertheless, we demonstrated through this experiment that sesquiterpenes such as β-elemene and (E,E)-α-farnesene are involved in epoxiconazole dose-response. In particular, (E,E)-α-farnesene could serve as a metabolic marker of fungicide exposure for oilseed rape plantlets.

International audience | Aquatic wildlife is exposed through trophic transfer of hazardous substances to several threats inducing physiological impairments. We aimed at assessing the impact of contamination in one of the hot spots of pollution along Mediterranean coasts, the gulf of Gabes in Tunisia, on Common tern Sterna hirundo, a piscivorous top predator bird. Firstly, we compared the reproductive effort of breeding adults through clutch size distribution in three sites with different levels of pollution. Then, a battery of genotoxicity and oxidative stress biomarkers was carried out to assess physiological impairments in chicks. While defense mechanisms showed a depletion, lipid peroxidation and genotoxicity increased significantly according to pollution level. The multi-biomarker approach used here, discriminated chicks according to contamination degree of their nesting sites. Increases in genotoxicity and oxidative stress were correlated to a decrease in chick body mass known to lead to long-term impacts on juvenile survival and recruitment in birds.

International audience | The paper presents an analysis of runoff behaviour of four urban catchments between the municipalities of Belo Horizonte and Contagem in Brazil, linked to their land use. Two years of online measurement of flow data, combined with spatial analysis, was linked through runoff modelisation with EPA SWMM. The coefficients of Nash obtained varying between 0.75 and 0.87 demonstrated an adequate modelling approach. A 1-year rain series was applied to evaluate the runoff behaviour of actual land cover and that of 2002. The peak flows normalised to watershed surfaces revealed as the most urbanised (85%) watershed Ressaca with 178 L/ha/s, three times more runoff intensive than the least urbanised (41%) Mergulhão with 67 L/ha/s. Statistical analysis of land cover data and modelling results on watershed and sub-watershed level showed main correlations between hydrological parameters such as peak flow, average event flow and restitution time, but also between land cover and runoff coefficient. This approach gave a linear relation between runoff and green surface, with a runoff coefficient of 0.86 for fully urbanised zone and 0.43 for full “green” cover. Prospective simulation with actual urbanisation rates varying from 4 to 34 ha/year suggested an increase between 6 and 18% of the flows and a possible end of urbanisation within the next two to three decades. These findings should contribute to a better understanding of hydrological impact of Belo Horizonte urbanisation and to the restauration of its Lake Pampulha.

The Beagle Channel is a remote subantarctic environment where mussel aquaculture initiatives have existed since the early 1990s. Here we analyze phytoplankton biomass and composition, and the occurrence of harmful microalgae species and their toxins at three sites during the period 2015–2016. The occurrence of potentially harmful algae was observed throughout the study period, including toxigenic dinoflagellates such as Alexandrium catenella (Group I of the A. tamarense complex), A. ostenfeldii, Dinophysis acuminata, Gonyaulax spinifera, Azadinium sp., and the diatoms Pseudo-nitzschia australis and P. fraudulenta. Toxic dinoflagellates were detected in low densities whereas a Pseudo-nitzschia bloom was observed in late February. Isolates of A. catenella and P. delicatissima sensu stricto were phylogenetically characterized. The toxin profile of A. catenella was dominated by GTX4, while P. delicatissima sensu stricto showed no production of the neurotoxin domoic acid in culture conditions. The results provide base-line information for the management of harmful algal blooms in this little explored subantarctic area.

International audience | Biocides are added to or applied on building materials to prevent microorganisms from growing on their surface or to treat them. They are leached into building runoff and contribute to diffuse contamination of receiving waters. This review aimed at summarizing the current state of knowledge concerning the impact of biocides from buildings on the aquatic environment. The objectives were (i) to assess the key parameters influencing the leaching of biocides and to quantify their emission from buildings; (ii) to determine the different pathways from urban sources into receiving waters; and (iii) to assess the associated environmental risk. Based on consumption data and leaching studies, a list of substances to monitor in receiving water was established. Literature review of their concentrations in the urban water cycle showed evidences of contamination and risk for aquatic life, which should put them into consideration for inclusion to European or international monitoring programs. However, some biocide concentration data in urban and receiving waters is still missing to fully assess their environmental risk, especially for isothiazolinones, iodopropynyl carbamate, zinc pyrithione and quaternary ammonium compounds, and little is known about their transformation products. Although some models supported by actual data were developed to extrapolate emissions on larger scales (watershed or city scales), they are not sufficient to prioritize the pathways of biocides from urban sources into receiving waters during both dry and wet weathers. Our review highlights the need to reduce emissions and limit their transfer into rivers, and reports several solutions to address these issues.

International audience

[Departement_IRSTEA]Eaux [ADD1_IRSTEA]Systèmes aquatiques soumis à des pressions multiples | International audience | Understanding how organisms cope with global change is a major question in many fields of biology. Mainly, understanding the molecular mechanisms supporting rapid phenotypic changes of organisms in response to stress and linking stress-induced molecular events to adaptive or adverse outcomes at the individual or population levels remain a major challenge in evolutionary biology, ecology or ecotoxicology. In this view, the present study aimed to test (i) whether environmental factors, especially pollutants, can trigger changes in the activity of retrotransposons (RTs) in wild fish and (ii) if changes in RT DNA methylation or transcription levels can be linked to modifications at the individual level. RTs are genetic elements that have the ability to replicate and integrate elsewhere in the genome. Although RTs are mainly quiescent during normal development, they can be experimentally activated under life-threatening conditions, affecting the fitness of their host. Wild eels were collected in four sampling sites presenting differing levels of contamination. The methylation level and the transcriptional activity of two RTs and two genes involved in development and cell differentiation were analyzed in fish liver in addition to the determination of fish contaminants levels and diverse growth and morphometric indices. An up-regulation of RTs associated to lower methylation levels and lower growth indices were observed in highly contaminated fish. Our results suggest that RT activation in fish experiencing stress conditions could have both detrimental and beneficial implications, affecting fish growth but promoting resistance to environmental stressors such as pollutants. Retrotransposons could represent interesting environment-sensitive molecular markers allowing to link stress-induced molecular events to adverse outcomes at higher levels.

Today, the environmental awareness is leading to the recovery of the solid organic waste and the use of fossil fuels. Methanisation, or anaerobic digestion, is a solution. This process is the transformation of organic matter by bacteria in the absence of oxygen. It allows both the treatment of organic waste and provides two main products biogas and digestate. Digestate is an improved fertilizer that can be used by spreading or composting. Biogas can be used to produce heat or electricity. Biogas production is currently supported by governments of developed countries. In France, the number of installations is gradually increasing (Club Biogaz ATEE, 2011). However, waste used as raw material can potentially be rich in microorganisms. Currently, some questions arise about the potential spread of micro-organisms by this type of process. Among the among the dispersal pathways, the airborne mode of spread is often poorly explored. During the anaerobic process, a few phases seem to be able to cause the aerosolization of microorganisms, for example, the stock of raw materials or digestate handling. In this context, the EMAMET project was realised to provide data on atmospheric emissions from these processes (Bayle et al, 2016). The objectives of this study are to enumerate and describe the airborne microbial community on anaerobic digestor site caracterized by molecular approach. On a quarterly basis, over a one-year period, of the anaerobic digestion of waste water activated sludge has been monitored. For each campaign, four sampling locations have been investigated; the storage area for raw materials, the raw material preparation area, the digestion reactor and the phase separation zone of the digestate. A fifth simple, an outdoor control sampling point was also included.

This is the post-print version of the following article: "Threats Underestimated in Freshwater Plastic Pollution: Mini-Review", which has been published in final form at https://link.springer.com/article/10.1007/s11270-019-4220-z | International audience | Plastic pollution is one of the most acute environmental topics of our time. While there is a great scientific effort to tackle this problem, it has not always been well-coordinated or properly targeted. In this short review we call for scientists to get involved in three crucial topics (threats) underestimated-or ignored-in freshwater systems: i) plastic-species entanglement, ii) plastic as nesting material and iii) macroplastic debris coming from mismanaged household solid waste. Reducing the knowledge gaps between marine and freshwater environments will be crucial to solute the plastic pollution problem effectively and globally. Therefore, we make a plea here to reinforce research activities on these three issues in freshwater environments worldwide.