We argue that the residence times of key pollutants exported to the Great Barrier Reef (GBR) are greater in the GBR lagoon than those of the water itself, in contradiction to some previous assumptions. Adverse effects of the pollutant discharge will be greater and longer lasting than previously considered, in turn requiring stronger or more urgent action to remediate land practices. Residence times of fine sediments, nitrogen and phosphorus, pesticides and trace metals are suggested to be from years to decades in the GBR lagoon and highly likely to be greater than the residence time of water, estimated at around 15–365days. The recovery of corals and seagrass in the central region of the GBR following current land-use remediation in the catchment depends on the residence time of these contaminants. Ecohydrological modeling suggests that this recovery may take decades even with adequate levels of improved land management practices.

The aim of the present study is to provide information on the ecological integrity of an industrial district located in the estuary of Pará River (Amazon estuary), by applying a selection of fish based multimetric indices of ecosystem integrity: Abundance Biomass Comparation (ABC); Biological Health Index; Estuarine Fish Community, Transitional Fish Classification and Estuarine Biotic Integrity Indexes. To evaluate the impacts of the industrial area and cargo terminal, three areas were considered: Zone 1, (maximum impact), Zone 2 (median risk) and Zone 3 (reference area). All the biological indices used were considered to be excellent indicators of the ecological integrity of the different sectors of the study area and were especially effective for the demonstration of the critical alterations of the fish community of Zone 1 and Zone 2. The simultaneous use of diferents indices family, with diferente assumptions, did strengthen the results enhancing the confidence in the diagnostic.

The distributions, annual sedimentation and atmospheric deposition flux of heavy metals have been studied in sediments of the South Yellow Sea (SYS), in order to evaluate their levels and pollution status. The higher concentrations of heavy metals were generally found in the central part of the SYS, which may be associated with the organic matters due to their high affinity to the metals. According to the calculated enrichment factor (EF) of the studied metals, Cd in the sediments posed a high risk to local environments, while Mn, Hg, Pb and Zn were at moderate risk levels. Sedimentation fluxes study in the SYS showed that most heavy metals were deposited in the Chinese offshore. Annual dry deposition flux of these metals indicated that the particulate heavy metals deposition via atmosphere also play an important role in biogeochemical cycles in the SYS.

A global ocean circulation model is coupled to a Lagrangian particle tracking model to simulate 30years of input, transport and accumulation of floating debris in the world ocean. Using both terrestrial and maritime inputs, the modelling results clearly show the formation of five accumulation zones in the subtropical latitudes of the major ocean basins. The relative size and concentration of each clearly illustrate the dominance of the accumulation zones in the northern hemisphere, while smaller seas surrounded by densely populated areas are also shown to have a high concentration of floating debris. We also determine the relative contribution of different source regions to the total amount of material in a particular accumulation zone. This study provides a framework for describing the transport, distribution and accumulation of floating marine debris and can be continuously updated and adapted to assess scenarios reflecting changes in the production and disposal of plastic worldwide.

Increased human habitation has led to a 30 to 50-fold increase in nutrient loads to the coastal waters of Adelaide, resulting in the loss of over 5000ha of seagrass meadows. The rate of loss since the 1940s has been irregular, averaging 85hayr⁻¹, marked by a substantial peak between 1971 and 1977. A modelling approach allowed comparison of the annual input with the annual uptake rates for the different biotic components in the seagrass bed. In 2005, the estimated uptake of ammonium (465tyr⁻¹) and nitrate (3.04tyr⁻¹) by the seagrass and associated epiphytes in the Adelaide region accounted for 31% of the ammonium and <1% of the nitrate that is currently discharged into the coastal waters. Environment Improvement Programs, such as the one implemented in 1996, may reduce the total nitrogen loads to 700tyr⁻¹, possibly stemming further losses and facilitating recolonisation of new seagrass.

Debris removal programs are combatting the accumulation of derelict fishing gear and other debris in marine habitats. We analyzed 5years of lobster trap debris removal data in Biscayne National Park, Florida to assess removal efficiency and develop spatially-explicit mapping tools to guide future removals. We generated and validated debris “hot spots” maps that combined remotely-sensed data (i.e. benthic habitat type and bathymetry) with 862 locations of previous debris collection. Our hot spot models spatially depict regions of likely debris accumulation, reducing the search area by 95% (from 332km² to 18km²) and encompassing 100% of the validation sites. Our analyses indicate removal contractors using sub-surface towed divers enhanced debris recovery. Additionally, the quantity of debris removed did not decrease with increased efforts, suggesting that debris supply in situ exceeds removal efforts. We conclude with the importance of coupling analysis of ongoing debris removal programs with GIS technology to improve removal efforts.

Riverine freshwater plumes are the major transport mechanism for nutrients, sediments and pollutants into the Great Barrier Reef (GBR) lagoon and connect the land with the receiving coastal and marine waters. Knowledge of the variability of the freshwater extent into the GBR lagoon is relevant for marine park management to develop strategies for improving ecosystem health and risk assessments. In this study, freshwater extent has been estimated for the entire GBR lagoon area from daily satellite observations of the Moderate Resolution Imaging Spectroradiometer (MODIS) between 2002 and 2010. To enable a reliable mapping of freshwater plumes we applied a physics-based coastal ocean colour algorithm, that simultaneously retrieves chlorophyll-a, non-algal particulate matter and coloured dissolved organic matter (CDOM), from which we used CDOM as a surrogate for salinity (S) for mapping the freshwater extent.

This study quantifies benthic nutrient fluxes and sedimentation rates in the Ahe Atoll lagoon (French Polynesia), in two stations located under pearl oyster frames, and two control stations away from the pearl culture facility. Dissolved inorganic nitrogen fluxes ranged between 2 and 35μmolNm⁻²h⁻¹ and Soluble Reactive Phosphorus varied between −3 and 8.2μmolPm⁻²h⁻¹. Particulate sedimentation rates beneath the oysters were approximately five times higher than in the control zone and the percentage of small particles (⩽63μm) were about the twice. In contrast, sediment composition was similar under and outside the direct influence of oyster frames. In this ecosystem, where primary production is dependent on the available nitrogen, our study revealed that, while highly variable, benthic fluxes could sometimes contribute up to 28% of the nitrogen demand for primary production.